Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0769.Seq
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.6
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 29 3.6
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 29 3.6
AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical ... 29 4.8
Z66522-3|CAA91408.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 6.3
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 6.3
Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical pr... 28 8.4
U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical pr... 28 8.4
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 28 8.4
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 28 8.4
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 133 RPARGIPGGSSPHHIYRALLRHKPVHGGPPP 225
RP G PGG +Y L+ +P GGPPP
Sbjct: 796 RPPPGAPGGGGG--MYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 133 RPARGIPGGSSPHHIYRALLRHKPVHGGPPP 225
RP G PGG +Y L+ +P GGPPP
Sbjct: 796 RPPPGAPGGGGG--MYPPLIPTRPGPGGPPP 824
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVHGGPPPGYFSLP 243
G GG PHH H HG PPP Y+ P
Sbjct: 113 GYGGGPGPHH-------HHHHHGPPPPPYYGRP 138
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVHGGPPPGYFSLP 243
G GG PHH H HG PPP Y+ P
Sbjct: 113 GYGGGPGPHH-------HHHHHGPPPPPYYGRP 138
>AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical
protein T19A6.4 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 409 RSHPSLPHRRTTAGRLCHGGRRSAELQYLLRRSADDDLPDQRRFRHPHH 263
+SH +P +R + L GG ++ + S +DD+ +HPHH
Sbjct: 139 KSHVYIPKKRNNSESLTSGGEIPSKKSMATQSSEEDDI-----VQHPHH 182
>Z66522-3|CAA91408.1| 281|Caenorhabditis elegans Hypothetical
protein F14E5.5 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +1
Query: 271 DAGTVADLAGHHPPTAEGDIAVQH-FAFHRGINAR----Q*FSDGVEMGAIFV---AQGK 426
D GT G +P I V H A + G++ + + +S G G +F A+GK
Sbjct: 46 DLGTKGSFGGGNPNATGLPIVVIHGLAGYAGLSKKSLLNKYYSYGQPKGTVFATTYARGK 105
Query: 427 V*E*ILHGMQVDF 465
+ + + HGMQ D+
Sbjct: 106 LMDSLQHGMQCDY 118
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 25 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 84
Query: 319 E 321
+
Sbjct: 85 D 85
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 332 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 391
Query: 319 E 321
+
Sbjct: 392 D 392
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 234 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 293
Query: 319 E 321
+
Sbjct: 294 D 294
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 25 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 84
Query: 319 E 321
+
Sbjct: 85 D 85
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 332 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 391
Query: 319 E 321
+
Sbjct: 392 D 392
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 43 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 102
Query: 319 E 321
+
Sbjct: 103 D 103
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 GIPGGSSPHHIYRALLRHKPVH--GGPPPGYFSLPR*N*KAHGEDAGTVADLAGHHPPTA 318
GI GG+S + + +L P G PG L N +HG + VA + H PT
Sbjct: 25 GIVGGTSTGVVVKTILPGSPADKDGRLQPGDHILQIGNINSHGMSSQQVATILRHQHPTV 84
Query: 319 E 321
+
Sbjct: 85 D 85
>Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical
protein ZK632.11 protein.
Length = 453
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 133 RPARGIPGGSSPHHIYRALLRHKPVHGGPPPGY 231
R A G+ G P HIYR +R + G PPG+
Sbjct: 171 RAALGLRGNDIPEHIYR--MRRLGLIDGYPPGW 201
>U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical
protein F41H10.6a protein.
Length = 863
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 435 LLHLPLRYEDRTHLYPIGELLPGVYATV---EGEVLNCNISFGGRRM 304
++++ + D+ + YPIGE P Y+ V GE ++ N+ F G +M
Sbjct: 615 VMYMSIHRHDKGNFYPIGE--PKDYSDVGEGAGEGMSVNVPFSGVQM 659
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical
protein F41H10.6c protein.
Length = 957
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 435 LLHLPLRYEDRTHLYPIGELLPGVYATV---EGEVLNCNISFGGRRM 304
++++ + D+ + YPIGE P Y+ V GE ++ N+ F G +M
Sbjct: 617 VMYMSIHRHDKGNFYPIGE--PKDYSDVGEGAGEGMSVNVPFSGVQM 661
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical
protein F41H10.6b protein.
Length = 955
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 435 LLHLPLRYEDRTHLYPIGELLPGVYATV---EGEVLNCNISFGGRRM 304
++++ + D+ + YPIGE P Y+ V GE ++ N+ F G +M
Sbjct: 615 VMYMSIHRHDKGNFYPIGE--PKDYSDVGEGAGEGMSVNVPFSGVQM 659
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 194 AISQYTADRRQAIFHCRAEIEKRMVRMPE 280
AI QY + R Q + + EI K V+MPE
Sbjct: 247 AIDQYISSRSQELLNQFVEINKMAVQMPE 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,230
Number of Sequences: 27780
Number of extensions: 452733
Number of successful extensions: 1114
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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