Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0769.Seq
(764 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 5.4
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 5.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 7.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 7.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 9.5
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 390 GRDGCDLRSAGEGVR 434
G DGCDL G G +
Sbjct: 109 GVDGCDLMCCGRGYK 123
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 390 GRDGCDLRSAGEGVR 434
G DGCDL G G +
Sbjct: 110 GVDGCDLMCCGRGYK 124
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 526 TGDLSWHLPCSLHSSPPVGISF 591
TGD+SW P SS + + +
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEY 164
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 439 STLTPSPALRRSHPSLPHRRTTAGRLCHGGRRSAELQYL 323
S+ +PSP+L S P H + + H + + +L L
Sbjct: 40 SSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQL 78
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 354 VEGEVLNCNISFGGRRMMTCQISDGS 277
VEG +++C+ G +++T I G+
Sbjct: 320 VEGVIIDCSNHIGRGKLVTALIQRGT 345
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPP 104
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPP 104
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPP 104
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPP 104
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPP 104
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +2
Query: 536 FHGTYPAACIVAHQSASASISP 601
F GTY + +V H + + P
Sbjct: 83 FDGTYQTSVVVTHNGSCLYVPP 104
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 389 PSENYCRAFMPRW 351
PS +YC +PRW
Sbjct: 175 PSLDYCVVKIPRW 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,479
Number of Sequences: 438
Number of extensions: 5537
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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