Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0768.Seq
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ267935-1|ABB89736.1| 2081|Homo sapiens dysferlin_v1 protein.         33   0.99 
AK074104-1|BAB84930.1| 1516|Homo sapiens FLJ00175 protein protein.     33   0.99 
AJ007670-1|CAA07603.1| 1413|Homo sapiens LGMD2B protein protein.       33   0.99 
AF075575-1|AAC63519.1| 2080|Homo sapiens dysferlin protein.            33   0.99 
AC010147-1|AAY14954.1| 1586|Homo sapiens unknown protein.              33   0.99 

>DQ267935-1|ABB89736.1| 2081|Homo sapiens dysferlin_v1 protein.
          Length = 2081

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 651  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLVRLND 496
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+ ++D
Sbjct: 1412 FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDD 1463


>AK074104-1|BAB84930.1| 1516|Homo sapiens FLJ00175 protein protein.
          Length = 1516

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 651  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLVRLND 496
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+ ++D
Sbjct: 959  FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDD 1010


>AJ007670-1|CAA07603.1| 1413|Homo sapiens LGMD2B protein protein.
          Length = 1413

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 651  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLVRLND 496
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+ ++D
Sbjct: 848  FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDD 899


>AF075575-1|AAC63519.1| 2080|Homo sapiens dysferlin protein.
          Length = 2080

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 651  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLVRLND 496
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+ ++D
Sbjct: 1411 FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDD 1462


>AC010147-1|AAY14954.1| 1586|Homo sapiens unknown protein.
          Length = 1586

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 651  FTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSVAHVLLVRLND 496
            F R P   Q +  SLE  L  P SA + +P G   D S LS    +L+ ++D
Sbjct: 917  FGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDD 968


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,327,340
Number of Sequences: 237096
Number of extensions: 2454837
Number of successful extensions: 6639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)