Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0768.Seq
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot...    29   4.7  
AY119442-1|AAM50096.1|  897|Drosophila melanogaster AT02134p pro...    29   8.1  
AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB...    29   8.1  
AE014296-3451|AAF51664.2|  931|Drosophila melanogaster CG12983-P...    29   8.1  

>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
           protein.
          Length = 1349

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 364 SRNPLRSVQRLTCRNNQP*KWMALKR 441
           SRNPLR +QRL      P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504


>AY119442-1|AAM50096.1|  897|Drosophila melanogaster AT02134p
           protein.
          Length = 897

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 675 RLTREQLLFTRNPSPRQSSRASLEYLLLP-PRSAPTEAPSGSRPDPSALSVAH 520
           R   E + F      ++  ++  + + +P P   P E P+G  PDP  + + H
Sbjct: 139 RAYNEAIAFIAQAEAKEKRKSQKKKIAIPKPPKMPQELPAGMFPDPRKIFLEH 191


>AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB,
            isoform B protein.
          Length = 1121

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 365  LPWPPSCCHERPTPFMVSHERFLGALTLRLVHPTAPVCLPKLAHLAPSSDLRLHRS 198
            +P PP       +P      RF+G  T++ V+P  P+ L +     P   LR H+S
Sbjct: 1012 MPPPPPLPPREESPATADSVRFVGDTTIQRVYPRHPLQLTR-PFCQPHLHLRHHQS 1066


>AE014296-3451|AAF51664.2|  931|Drosophila melanogaster CG12983-PA
           protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 675 RLTREQLLFTRNPSPRQSSRASLEYLLLP-PRSAPTEAPSGSRPDPSALSVAH 520
           R   E + F      ++  ++  + + +P P   P E P+G  PDP  + + H
Sbjct: 139 RAYNEAIAFIAQAEAKEKRKSQKKKIAIPKPPKMPQELPAGMFPDPRKIFLEH 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,475,725
Number of Sequences: 53049
Number of extensions: 756244
Number of successful extensions: 2322
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)