Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0768.Seq
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    26   0.30 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   8.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   8.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   8.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.6  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 344 CHERPTPFMVSHERF--LGALTLRLVHPTAPVCLPKL 240
           C +  + F ++ ++F  L  L   LV+ T PVC PKL
Sbjct: 119 CSKIVSAFKIAIDKFDRLWVLDSGLVNRTVPVCAPKL 155


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 386 CNDSPAETTSPENGW 430
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -2

Query: 216 SPASSFE*AGVLTHLKFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGN 61
           S A+S E   + TH +  ++LR  R     S  L DE   K +  ++  EGN
Sbjct: 220 STAASDEDISLTTHQQKRHKLRVTRCYSSDSAVLSDEDQTKGWDGSNMVEGN 271


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 311 HERFLGALTLRLVHPTAPVCLPKL 240
           +ER L  L   LV+ T P+C PKL
Sbjct: 137 YER-LWVLDSGLVNNTQPMCSPKL 159


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 445 AYTLPLPARVMLNF 486
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 299 LGALTLRLVHPTAPVCLPKL 240
           L  L   LV+ T P+C PKL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKL 154


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 299 LGALTLRLVHPTAPVCLPKL 240
           L  L   LV+ T P+C PKL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKL 154


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 299 LGALTLRLVHPTAPVCLPKL 240
           L  L   LV+ T P+C PKL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKL 154


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 549 GVSRLEPPSVQILVVVANTPA 611
           GVS++ P S+  LV    +PA
Sbjct: 385 GVSQVSPVSMSALVSAVRSPA 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,199
Number of Sequences: 438
Number of extensions: 4202
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)