Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0766.Seq
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.4  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 458 SWKADNFIYD-LCNLCKSLVLQYSMSKILASQRDALFI 348
           +WK     Y+ LC LCK +  + S   +++   D LFI
Sbjct: 265 AWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFI 302


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 458 SWKADNFIYD-LCNLCKSLVLQYSMSKILASQRDALFI 348
           +WK     Y+ LC LCK +  + S   +++   D LFI
Sbjct: 265 AWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFI 302


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 458 SWKADNFIYD-LCNLCKSLVLQYSMSKILASQRDALFI 348
           +WK     Y+ LC LCK +  + S   +++   D LFI
Sbjct: 265 AWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFI 302


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 60  CRM*HCMNIGSNKCVINKKK 1
           CR+  C N+G NK  +  ++
Sbjct: 95  CRLKKCQNVGMNKDAVQHER 114


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 60  CRM*HCMNIGSNKCVINKKK 1
           CR+  C N+G NK  +  ++
Sbjct: 95  CRLKKCQNVGMNKDAVQHER 114


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 38 FIQCYILHLDYAYTE*FKY 94
          +I C++L L Y Y++ + Y
Sbjct: 5  YIACFLLLLYYIYSKHYSY 23


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 393 QHVENISISARRLV 352
           +H++NIS+ AR+ V
Sbjct: 275 KHIDNISLRARKQV 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,436
Number of Sequences: 336
Number of extensions: 3660
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)