Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0764X.Seq
         (365 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0982 - 22025279-22027277,22030256-22030488,22031205-220313...    27   6.0  
05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165...    27   6.0  

>10_08_0982 -
           22025279-22027277,22030256-22030488,22031205-22031344,
           22032783-22032957
          Length = 848

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 57  LCRVPLVEIICVHPTCF 107
           LC +P +E IC+H  C+
Sbjct: 724 LCELPSLETICIHNYCY 740


>05_05_0147 +
           22715144-22715444,22716245-22716407,22716484-22716532,
           22716626-22716739,22716812-22717234,22717307-22717693,
           22717777-22717872,22717978-22718093,22718137-22718272,
           22718392-22718480,22718586-22718736,22719057-22719185,
           22719276-22719354,22719435-22719544
          Length = 780

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 294 TPGWIGVPFHIIILFMFVLRHH 359
           TPGW G+   +I+ F F L  H
Sbjct: 405 TPGWTGILMILIMSFSFTLATH 426


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,000,606
Number of Sequences: 37544
Number of extensions: 67073
Number of successful extensions: 144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)