Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0762X.Seq
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.28 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   4.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 256  KTRRVTLKPGCTLMLKPP*PYSRAGIEPSRGRSF 155
            K +  T+KP  T+  +P  P   A + P +GR F
Sbjct: 2209 KPKPTTMKPTTTIGYEPQEPVLPAEVVPCQGRLF 2242


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 432 MVRRAGRVYRSDTRYSAAAW 373
           ++R  GR++R+  R + A+W
Sbjct: 300 VMRELGRIFRAYCRENHASW 319


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +1

Query: 412 APRPPHHPGGLQRRP--ARSRLHQPA 483
           A + P   GG +R P  ARSR H PA
Sbjct: 318 AVQVPQLAGGGRRGPGPARSRRHLPA 343


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 354 CLFSSRPALCH 322
           C+FS RP L H
Sbjct: 282 CIFSLRPGLTH 292


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 52  EKLQSKDSTRRSTRPNRYSTPVKTAPKYPCSLYRKRICRATAR 180
           EKL+++D   R+   N Y   V +   Y  S+   +  R  A+
Sbjct: 117 EKLKTRDQKERNLFKNAYFQLVLSISVYSSSVGYTQYVRIAAK 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,460
Number of Sequences: 336
Number of extensions: 1704
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)