Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0762X.Seq
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0058 + 440328-440437,440514-440733,441605-441805,441915-44... 111 2e-25
04_04_0790 + 28083116-28083337,28083446-28083652,28083739-280838... 111 3e-25
06_03_1503 - 30621089-30621170,30621258-30621438,30621462-306215... 77 1e-14
09_04_0365 - 16962608-16963174,16963301-16963486,16963824-169638... 60 1e-09
09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716... 40 0.001
02_02_0501 - 10999203-10999754,11000724-11001460,11001461-110018... 30 1.1
08_01_1072 + 10954080-10954851,10954956-10955027,10955108-109551... 29 1.5
07_03_1728 + 29076733-29079069 29 2.0
01_06_0216 + 27618116-27618548,27618960-27619042,27619169-276192... 29 2.0
06_01_1013 - 7931756-7935109 29 2.6
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 28 3.5
05_03_0424 - 13795721-13795900,13796134-13796202,13796260-137963... 28 3.5
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 28 3.5
01_03_0241 - 14111286-14111935,14111992-14112115 28 4.6
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 27 6.0
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223... 27 6.0
>01_01_0058 +
440328-440437,440514-440733,441605-441805,441915-441985,
442058-442217,444166-444492,444529-444759,444869-445249,
445573-445648,445736-445799,446334-446469,447666-447710,
447851-447916
Length = 695
Score = 111 bits (268), Expect = 2e-25
Identities = 47/73 (64%), Positives = 62/73 (84%)
Frame = +3
Query: 42 EVFREVTVKGFDASQYEAKQIFYSSKDGTKVPMFIISKKDLPRDGSIPALLYGYGGFNIN 221
++FRE++V GFD + +E KQIF +SKDGTK+PMFI+SK+D+ DGS P LLYGYGGFNI+
Sbjct: 421 KIFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNIS 480
Query: 222 VQPGFSVTRLVLC 260
+ P FSV+R+VLC
Sbjct: 481 LTPSFSVSRVVLC 493
Score = 103 bits (246), Expect = 1e-22
Identities = 47/77 (61%), Positives = 55/77 (71%)
Frame = +2
Query: 254 LMQHMNGIVAIPNIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTI 433
L ++M +V + NIRGGGEYGE WH AG KQN FDDF A AE L+S YT L I
Sbjct: 492 LCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCI 551
Query: 434 QGGSNGGLLVAACINQR 484
+GGSNGGLL+AAC+NQR
Sbjct: 552 EGGSNGGLLIAACVNQR 568
>04_04_0790 +
28083116-28083337,28083446-28083652,28083739-28083809,
28083898-28084063,28084189-28084788,28084928-28085323
Length = 553
Score = 111 bits (267), Expect = 3e-25
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +3
Query: 27 ETVHAEVFREVTVKGFDASQYEAKQIFYSSKDGTKVPMFIISKKDLPRDGSIPALLYGYG 206
ET ++RE++V GFD + +EAKQ+FY SKDGTK+PMFI+SKK + DGS P LLYGYG
Sbjct: 398 ETPEMNIYREISVGGFDRTDFEAKQVFYPSKDGTKIPMFIVSKKSIVLDGSHPTLLYGYG 457
Query: 207 GFNINVQPGFSVTRLVL 257
GF +N+ P FSVTR+VL
Sbjct: 458 GFGMNMTPHFSVTRIVL 474
Score = 110 bits (264), Expect = 7e-25
Identities = 50/76 (65%), Positives = 58/76 (76%)
Frame = +2
Query: 254 LMQHMNGIVAIPNIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTI 433
LM+++ + I NIRGGGEYGE WH AG L NKQN FDDF AA E+LVS YT P+ L +
Sbjct: 474 LMRNLGFVSCIANIRGGGEYGEDWHKAGSLANKQNCFDDFIAAGEFLVSAGYTNPSRLCV 533
Query: 434 QGGSNGGLLVAACINQ 481
+G SNGGLLVAACINQ
Sbjct: 534 EGASNGGLLVAACINQ 549
>06_03_1503 -
30621089-30621170,30621258-30621438,30621462-30621510,
30621777-30621842,30621976-30622014,30622414-30622779,
30623290-30623448,30623805-30623993,30624877-30625168,
30626251-30626597,30627239-30627433,30627518-30627798,
30629525-30629690
Length = 803
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 275 IVAIPNIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
I I +IRGGGE G +W+ G+LLNK+N F DF A AE+L+ +Y L I G S GG
Sbjct: 563 IYVIAHIRGGGEMGRKWYEDGKLLNKRNTFTDFIACAEHLIENKYCSKEKLCINGRSAGG 622
Query: 455 LLVAACINQR 484
LL+ A +N R
Sbjct: 623 LLMGAVLNMR 632
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 39 AEVFREVTVKGFDASQYEAKQIFYSSKDGTKVPMFIISKKD-LPRDGSIPALLYGYGGFN 215
+E R + GFDAS Y ++ + ++ DGT++PM I+ +KD + DGS P LLYGYG +
Sbjct: 484 SESARRTVLGGFDASNYVTERKWAAASDGTQIPMTILYRKDRVNLDGSDPMLLYGYGSYE 543
Query: 216 INVQPGFSVTRLVL 257
I + P F +R L
Sbjct: 544 ICIDPSFGRSRFSL 557
>09_04_0365 -
16962608-16963174,16963301-16963486,16963824-16963896,
16964307-16964497,16964982-16965198,16965394-16965797,
16966593-16966658,16966668-16966721,16966945-16967079,
16967194-16967391,16967734-16967918,16968990-16969527
Length = 937
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +2
Query: 275 IVAIPNIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
++A ++RGGG YG++WH G K N DF + E+L+ + + L G S GG
Sbjct: 520 VIAFADVRGGGGYGKKWHQDGARTKKMNSIYDFISCGEFLLEKGIIKENKLAGWGYSAGG 579
Query: 455 LLVAACINQR 484
LLVA+ IN R
Sbjct: 580 LLVASAINTR 589
>09_04_0503 -
18170645-18170858,18171029-18171222,18171419-18171629,
18172162-18172553,18172926-18173054,18173353-18173487,
18173885-18174088,18174716-18174771,18174793-18174950,
18175864-18176231
Length = 686
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 87 YEAKQIFYSSKDGTKVPMFIISKKDLPRDGSIPALLYGYGGFNINVQPGFSVTRLVL 257
+ +++ S DG VP+ I+ ++ R G P +LYGYG + ++ + RL L
Sbjct: 412 FSCERVQVISHDGVSVPLVILYSREAHRRGESPGVLYGYGAYGEDLDKSWCSDRLSL 468
>02_02_0501 -
10999203-10999754,11000724-11001460,11001461-11001836,
11001917-11001946,11002718-11002912,11003604-11004149
Length = 811
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 365 DDFQAAAEYLVSERYTRPALLTIQGGSNGGLLVAACI 475
+D A AE+L+ + +P + + G S GG L A C+
Sbjct: 655 EDQLAGAEWLIKKGLAKPGHIGLYGWSYGGFLSAMCL 691
>08_01_1072 +
10954080-10954851,10954956-10955027,10955108-10955191,
10955285-10955353,10955814-10955916,10956033-10956107,
10956204-10956366,10956502-10956571,10956649-10956735,
10956795-10956836,10956904-10956969,10957201-10957275,
10960149-10960271,10960683-10960966
Length = 694
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 134 YFGAVFTGVEYLFGLVLRRVESFDCNFSEHFG 39
Y G V+ G+ +L +L R E+ DC+ +E G
Sbjct: 374 YLGLVYLGLRFLSKSILNRGENVDCDDAERSG 405
>07_03_1728 + 29076733-29079069
Length = 778
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 345 SSRPALCHLSPYSPPPLMLG 286
SS+PALC+++P + PP +G
Sbjct: 15 SSKPALCYINPGATPPQKIG 34
>01_06_0216 +
27618116-27618548,27618960-27619042,27619169-27619225,
27619255-27619407,27619777-27619872,27620103-27620183,
27620184-27620254,27620343-27620385,27620502-27620582,
27620684-27620743,27621018-27621083,27621358-27621455,
27621794-27621842,27621933-27621977,27622845-27623369
Length = 646
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 19 FKQKPYTPKCSEKLQSKDSTRRSTRPNRYSTPVKTAPKY 135
FK+ +C QS S+RRS P Y T P+Y
Sbjct: 601 FKRGKGLAQCDRSHQSAGSSRRSKGPREYDRFTNTLPQY 639
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 135 PMFIISKKDLPRDGSIPALLYGYGG 209
P +++ DLPRD + AL+ +GG
Sbjct: 924 PRLVVAMLDLPRDADVSALVLRFGG 948
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 338 RLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGGLLV 463
RL+ DD + A+Y + + T +L ++GGS GG +
Sbjct: 42 RLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTI 83
>05_03_0424 -
13795721-13795900,13796134-13796202,13796260-13796385,
13797224-13798166,13798263-13799248
Length = 767
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 196 YSRAGIEPSRGRSFFDIMNMGTLVPSLLE*NICLASYCD 80
Y R G+ GR F D++ GT+ P+++ + LA+ D
Sbjct: 228 YGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRD 266
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -1
Query: 468 AATSRPPLEPPWMVRRAGRVYRSDTRYSAAAWKSSNTFCLFSSRPALCHLSPYSPPPLML 289
A++S PP EPP A V + S+AA ++ P LSP S P+M+
Sbjct: 28 ASSSAPPAEPP--AAAAAAVAAAAAAASSAAAAAAQAQASSEGSPPASELSPGSLSPVMI 85
>01_03_0241 - 14111286-14111935,14111992-14112115
Length = 257
Score = 27.9 bits (59), Expect = 4.6
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +2
Query: 296 RGGGEYG----ERWHNAGR-LLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
RGG E G E W GR LL + + + A LV+E LLT +GG GG
Sbjct: 26 RGGEERGTWIEEAWGGGGRRLLGEDDGAGLGRTIAASLVAEASGLTVLLTPRGGGRGG 83
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 409 HAPRPPHHPGGLQRRPARSRLHQPA 483
H P PPHHP P + QPA
Sbjct: 237 HPPPPPHHPAPRPPPPMAAAPRQPA 261
>04_04_1275 +
32321161-32321285,32321849-32322071,32322187-32322309,
32322391-32322519,32322939-32323024,32323233-32323356,
32323531-32323579,32323808-32323890,32323975-32324042,
32324187-32324264,32324460-32324547,32324640-32324756,
32324844-32325176
Length = 541
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 275 IVAIPNIRGGGEYGERWHNAGR-LLNKQNVFDDFQAAAEYLVSERY 409
+V N R GG+ G R LLNK VFD + A E ++ Y
Sbjct: 88 VVVFINSRSGGQLGSSLIKTYRELLNKAQVFDLSEEAPEKVLHRLY 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,252
Number of Sequences: 37544
Number of extensions: 247557
Number of successful extensions: 968
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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