Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0762X.Seq
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl pep...    32   0.19 
L23648-14|AAM48527.1|  573|Caenorhabditis elegans Dipeptidyl pep...    32   0.19 
L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl pep...    32   0.19 
AL009246-1|CAA15835.1|  281|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform b protein.
          Length = 511

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 290 NIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
           N RG   +G+R  NAG     + +  D   A E+ VS+     + + + GGS GG
Sbjct: 236 NFRGSTGFGKRLTNAGNGEWGRKMHFDILDAVEFAVSKGIANRSEVAVMGGSYGG 290


>L23648-14|AAM48527.1|  573|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform c protein.
          Length = 573

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 290 NIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
           N RG   +G+R  NAG     + +  D   A E+ VS+     + + + GGS GG
Sbjct: 465 NFRGSTGFGKRLTNAGNGEWGRKMHFDILDAVEFAVSKGIANRSEVAVMGGSYGG 519


>L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform a protein.
          Length = 740

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 290 NIRGGGEYGERWHNAGRLLNKQNVFDDFQAAAEYLVSERYTRPALLTIQGGSNGG 454
           N RG   +G+R  NAG     + +  D   A E+ VS+     + + + GGS GG
Sbjct: 465 NFRGSTGFGKRLTNAGNGEWGRKMHFDILDAVEFAVSKGIANRSEVAVMGGSYGG 519


>AL009246-1|CAA15835.1|  281|Caenorhabditis elegans Hypothetical
           protein C47F8.1 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 54  EVTVKGFDASQYEAKQIFYSSKDGTK 131
           +V +KG D    E K+IF   KDG K
Sbjct: 224 KVVLKGIDVESVEKKRIFKVKKDGIK 249


>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 469 GGYEQAAVGAPLDGEEGGARVP 404
           GG E A  G P  G  GGA VP
Sbjct: 388 GGCEDADCGGPCPGARGGASVP 409


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 469 GGYEQAAVGAPLDGEEGGARVP 404
           GG E A  G P  G  GGA VP
Sbjct: 388 GGCEDADCGGPCPGARGGASVP 409


>AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical
           protein H34I24.2 protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -3

Query: 133 TLVPSLLE*NICLASYCDASNPLTVTSLNTSACT 32
           T  P     N CLA  C  S P  + SLN   CT
Sbjct: 258 TAPPPTTTPNPCLAFNCTGSGPCQLDSLNRPYCT 291


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 61  QSKDSTRRSTRPNRYSTPVKT 123
           +SK  TR  T P R  TPVKT
Sbjct: 592 ESKTPTREETTPVREKTPVKT 612


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,042,981
Number of Sequences: 27780
Number of extensions: 169894
Number of successful extensions: 658
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)