Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0762X.Seq
         (486 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   4.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.0  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 165 PRDGSIPALLYGYGG 209
           PR+G +P L++ YGG
Sbjct: 153 PRNGLLPLLVWIYGG 167


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 486 GRWLMQAATSRPPLEPPW 433
           G WL   AT  PPL   W
Sbjct: 47  GAWLDCTATGSPPLNIDW 64



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 433  DGEEGGARVPL 401
            DGEEGGA + L
Sbjct: 1064 DGEEGGAELRL 1074


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 486 GRWLMQAATSRPPLEPPW 433
           G WL   AT  PPL   W
Sbjct: 47  GAWLDCTATGSPPLNIDW 64



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 433  DGEEGGARVPL 401
            DGEEGGA + L
Sbjct: 1060 DGEEGGAELRL 1070


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 165 PRDGSIPALLYGYGG 209
           PR+G +P L++ YGG
Sbjct: 153 PRNGLLPLLVWIYGG 167


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 272 GIVAIPNIRGGGEYGE 319
           G + I  I GGGE+G+
Sbjct: 631 GYITIEAIIGGGEFGD 646


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 76  TRRSTRPNRYSTPVKTAPKYPCSLYRK 156
           T   T    ++T V   PK+ C+ YR+
Sbjct: 235 TETETWTRVFNTLVDLVPKHACAEYRR 261


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 486 GRWLMQAATSRPPL 445
           G W++  A S PPL
Sbjct: 159 GVWILSGAISSPPL 172


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 486 GRWLMQAATSRPPL 445
           G W++  A S PPL
Sbjct: 159 GVWILSGAISSPPL 172


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 486 GRWLMQAATSRPPL 445
           G W++  A S PPL
Sbjct: 159 GVWILSGAISSPPL 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,830
Number of Sequences: 438
Number of extensions: 2208
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)