BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0761.Seq (670 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X54504-1|CAA38366.1| 396|Drosophila melanogaster drosophila tro... 113 2e-25 AY665838-1|AAU09446.1| 374|Drosophila melanogaster troponin T p... 113 2e-25 AY439172-5|AAR24586.1| 374|Drosophila melanogaster troponin T-4... 113 2e-25 AY439172-4|AAR24587.1| 374|Drosophila melanogaster troponin T-5... 113 2e-25 AY439172-3|AAR24585.1| 388|Drosophila melanogaster troponin T-3... 113 2e-25 AY439172-2|AAR24584.1| 396|Drosophila melanogaster troponin T-2... 113 2e-25 AY439172-1|AAR24583.1| 397|Drosophila melanogaster troponin T-1... 113 2e-25 AY051989-1|AAK93413.1| 306|Drosophila melanogaster LD45641p pro... 113 2e-25 AE014298-1927|AAF48288.2| 306|Drosophila melanogaster CG7107-PD... 113 2e-25 AE014298-1926|AAX52493.1| 393|Drosophila melanogaster CG7107-PF... 113 2e-25 AE014298-1925|AAF48290.1| 397|Drosophila melanogaster CG7107-PA... 113 2e-25 AE014298-1924|AAX52492.1| 396|Drosophila melanogaster CG7107-PG... 113 2e-25 AE014298-1923|AAF48289.2| 389|Drosophila melanogaster CG7107-PB... 113 2e-25 AE014298-1922|AAX52491.1| 374|Drosophila melanogaster CG7107-PE... 113 2e-25 AY051765-1|AAK93189.1| 1129|Drosophila melanogaster LD29301p pro... 29 4.3 AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 29 4.3 BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro... 29 5.7 AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA... 29 5.7 L27469-1|AAA28743.1| 426|Drosophila melanogaster coracle protein. 28 10.0 BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p pro... 28 10.0 AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-P... 28 10.0 >X54504-1|CAA38366.1| 396|Drosophila melanogaster drosophila troponin-T protein. Length = 396 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 230 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 283 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 279 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 332 >AY665838-1|AAU09446.1| 374|Drosophila melanogaster troponin T protein. Length = 374 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 208 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 261 Score = 68.1 bits (159), Expect = 1e-11 Identities = 29/54 (53%), Positives = 38/54 (70%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G + + LEK WQER E+F R K++LPKWFGERPGKK GE E+P Sbjct: 257 KKKLFEGGYNTVYAETLEKTWQERQERFTQRTKSKLPKWFGERPGKKAGEPETP 310 >AY439172-5|AAR24586.1| 374|Drosophila melanogaster troponin T-4 protein. Length = 374 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 208 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 261 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 257 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 310 >AY439172-4|AAR24587.1| 374|Drosophila melanogaster troponin T-5 protein. Length = 374 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 208 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 261 Score = 68.1 bits (159), Expect = 1e-11 Identities = 29/54 (53%), Positives = 38/54 (70%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G + + LEK WQER E+F R K++LPKWFGERPGKK GE E+P Sbjct: 257 KKKLFEGGYNTVYAETLEKTWQERQERFTQRTKSKLPKWFGERPGKKAGEPETP 310 >AY439172-3|AAR24585.1| 388|Drosophila melanogaster troponin T-3 protein. Length = 388 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 222 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 275 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 271 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 324 >AY439172-2|AAR24584.1| 396|Drosophila melanogaster troponin T-2 protein. Length = 396 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 230 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 283 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 279 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 332 >AY439172-1|AAR24583.1| 397|Drosophila melanogaster troponin T-1 protein. Length = 397 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 231 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 284 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 280 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 333 >AY051989-1|AAK93413.1| 306|Drosophila melanogaster LD45641p protein. Length = 306 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 140 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 193 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 189 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 242 >AE014298-1927|AAF48288.2| 306|Drosophila melanogaster CG7107-PD, isoform D protein. Length = 306 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 140 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 193 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 189 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 242 >AE014298-1926|AAX52493.1| 393|Drosophila melanogaster CG7107-PF, isoform F protein. Length = 393 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 227 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 280 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 276 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 329 >AE014298-1925|AAF48290.1| 397|Drosophila melanogaster CG7107-PA, isoform A protein. Length = 397 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 231 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 284 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 280 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 333 >AE014298-1924|AAX52492.1| 396|Drosophila melanogaster CG7107-PG, isoform G protein. Length = 396 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 230 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 283 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 279 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 332 >AE014298-1923|AAF48289.2| 389|Drosophila melanogaster CG7107-PB, isoform B protein. Length = 389 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 223 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 276 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 272 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 325 >AE014298-1922|AAX52491.1| 374|Drosophila melanogaster CG7107-PE, isoform E protein. Length = 374 Score = 113 bits (273), Expect = 2e-25 Identities = 53/54 (98%), Positives = 54/54 (100%) Frame = -1 Query: 670 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 509 ELKERQKQQLRHKALKKGLDPEALTGK+PPKIQVASKYERRVDTRSYDDKKKLF Sbjct: 208 ELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF 261 Score = 76.2 bits (179), Expect = 4e-14 Identities = 30/54 (55%), Positives = 43/54 (79%) Frame = -3 Query: 524 QKETVQGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 363 +K+ +G ++++KD EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P Sbjct: 257 KKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 310 >AY051765-1|AAK93189.1| 1129|Drosophila melanogaster LD29301p protein. Length = 1129 Score = 29.5 bits (63), Expect = 4.3 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = -2 Query: 669 SSKKDKSSN*GTKL--SRRVSTPKRSQASTRPKFK*RPSTRGVSTHDPTTTKRNCSG*PR 496 S + D+ GT+L S+ S PKR RP+ + + RG + + + R+ G P Sbjct: 463 SERLDQPEPLGTQLRRSKSESLPKRG----RPRGQKQRKNRGATMEEKSANCRDGEGEPV 518 Query: 495 ETEQGLPREGVARE 454 + ++G PR+ + +E Sbjct: 519 KRKRGRPRKIIPKE 532 >AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA, isoform A protein. Length = 3257 Score = 29.5 bits (63), Expect = 4.3 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = -2 Query: 669 SSKKDKSSN*GTKL--SRRVSTPKRSQASTRPKFK*RPSTRGVSTHDPTTTKRNCSG*PR 496 S + D+ GT+L S+ S PKR RP+ + + RG + + + R+ G P Sbjct: 463 SERLDQPEPLGTQLRRSKSESLPKRG----RPRGQKQRKNRGATMEEKSANCRDGEGEPV 518 Query: 495 ETEQGLPREGVARE 454 + ++G PR+ + +E Sbjct: 519 KRKRGRPRKIIPKE 532 >BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p protein. Length = 1169 Score = 29.1 bits (62), Expect = 5.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 644 TEAQSSQEGSRPRSAHRQAPAQNSSSVQVREA 549 T + S E S RS HRQ A V VRE+ Sbjct: 929 TSGEDSSESSSSRSQHRQQAAATEEEVVVRES 960 >AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA protein. Length = 1169 Score = 29.1 bits (62), Expect = 5.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 644 TEAQSSQEGSRPRSAHRQAPAQNSSSVQVREA 549 T + S E S RS HRQ A V VRE+ Sbjct: 929 TSGEDSSESSSSRSQHRQQAAATEEEVVVRES 960 >L27469-1|AAA28743.1| 426|Drosophila melanogaster coracle protein. Length = 426 Score = 28.3 bits (60), Expect = 10.0 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Frame = -3 Query: 668 AQRKTKAATEAQSSQEGSRPRS--AHRQAPAQNSSSVQVREACRHTILRRQKETVQGDLE 495 A+++ A + G R AH ++P +N +R++ T + +++GD E Sbjct: 96 AEKEKVARKSSTLDHRGDRNADGDAHSRSPIKNKKEKLMRQSSTGTASASSQSSLEGDYE 155 Query: 494 ---KLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369 ++ E Q+ ++ R+K + K ER ++K ELE Sbjct: 156 TNLEIEAIEAEPPVQDADKEAKLREKKQKEKEEKERKEREKRELE 200 >BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p protein. Length = 703 Score = 28.3 bits (60), Expect = 10.0 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Frame = -3 Query: 668 AQRKTKAATEAQSSQEGSRPRS--AHRQAPAQNSSSVQVREACRHTILRRQKETVQGDLE 495 A+++ A + G R AH ++P +N +R++ T + +++GD E Sbjct: 373 AEKEKVARKSSTLDHRGDRNADGDAHSRSPIKNKKEKLMRQSSTGTASASSQSSLEGDYE 432 Query: 494 ---KLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369 ++ E Q+ ++ R+K + K ER ++K ELE Sbjct: 433 TNLEIEAIEAEPPVQDADKEAKLREKKQKEKEEKERKEREKRELE 477 >AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-PC, isoform C protein. Length = 703 Score = 28.3 bits (60), Expect = 10.0 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Frame = -3 Query: 668 AQRKTKAATEAQSSQEGSRPRS--AHRQAPAQNSSSVQVREACRHTILRRQKETVQGDLE 495 A+++ A + G R AH ++P +N +R++ T + +++GD E Sbjct: 373 AEKEKVARKSSTLDHRGDRNADGDAHSRSPIKNKKEKLMRQSSTGTASASSQSSLEGDYE 432 Query: 494 ---KLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 369 ++ E Q+ ++ R+K + K ER ++K ELE Sbjct: 433 TNLEIEAIEAEPPVQDADKEAKLREKKQKEKEEKERKEREKRELE 477 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,969,547 Number of Sequences: 53049 Number of extensions: 327950 Number of successful extensions: 1292 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1288 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2889369000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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