Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0760.Seq
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051914-1|AAH51914.1|  426|Homo sapiens NMUR1 protein protein.        30   7.4  
BC036543-1|AAH36543.1|  426|Homo sapiens neuromedin U receptor 1...    30   7.4  
AF272362-1|AAG24793.1|  426|Homo sapiens neuromedin U receptor 1...    30   7.4  
AF044601-1|AAC02680.1|  403|Homo sapiens orphan G protein-couple...    30   7.4  
AC017104-4|AAY24249.1|  426|Homo sapiens unknown protein.              30   7.4  
AL445252-3|CAI13644.1|  764|Homo sapiens transducin-like enhance...    30   9.8  
AL358975-3|CAI13734.1|  764|Homo sapiens transducin-like enhance...    30   9.8  
AL353813-5|CAI41315.1|  764|Homo sapiens transducin-like enhance...    30   9.8  
AB033087-1|BAA86575.1|  787|Homo sapiens KIAA1261 protein protein.     30   9.8  

>BC051914-1|AAH51914.1|  426|Homo sapiens NMUR1 protein protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 202 RSQLTCRFNNVHHGRRYVTSQIFVLL 279
           RS+ TCR      GRR VT  +FVL+
Sbjct: 278 RSRYTCRLQQHDRGRRQVTKMLFVLV 303


>BC036543-1|AAH36543.1|  426|Homo sapiens neuromedin U receptor 1
           protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 202 RSQLTCRFNNVHHGRRYVTSQIFVLL 279
           RS+ TCR      GRR VT  +FVL+
Sbjct: 278 RSRYTCRLQQHDRGRRQVTKMLFVLV 303


>AF272362-1|AAG24793.1|  426|Homo sapiens neuromedin U receptor 1
           protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 202 RSQLTCRFNNVHHGRRYVTSQIFVLL 279
           RS+ TCR      GRR VT  +FVL+
Sbjct: 278 RSRYTCRLQQHDRGRRQVTKMLFVLV 303


>AF044601-1|AAC02680.1|  403|Homo sapiens orphan G protein-coupled
           receptor protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 202 RSQLTCRFNNVHHGRRYVTSQIFVLL 279
           RS+ TCR      GRR VT  +FVL+
Sbjct: 255 RSRYTCRLQQHDRGRRQVTKMLFVLV 280


>AC017104-4|AAY24249.1|  426|Homo sapiens unknown protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 202 RSQLTCRFNNVHHGRRYVTSQIFVLL 279
           RS+ TCR      GRR VT  +FVL+
Sbjct: 278 RSRYTCRLQQHDRGRRQVTKMLFVLV 303


>AL445252-3|CAI13644.1|  764|Homo sapiens transducin-like enhancer
           of split 4 (E(sp1) homolog, Drosophila) protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 443 LRDCAKISPRKSSASQSTIGSKRDPLRRSGEKLSGLSMG*C-TRRTLAPSPGSTS 604
           L+  A ISP   ++S ST  SK   L  + +  + +S     T RT AP+PGS S
Sbjct: 276 LKKDAPISPASIASSSSTPSSKSKELSLNEKSTTPVSKSNTPTPRTDAPTPGSNS 330


>AL358975-3|CAI13734.1|  764|Homo sapiens transducin-like enhancer
           of split 4 (E(sp1) homolog, Drosophila) protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 443 LRDCAKISPRKSSASQSTIGSKRDPLRRSGEKLSGLSMG*C-TRRTLAPSPGSTS 604
           L+  A ISP   ++S ST  SK   L  + +  + +S     T RT AP+PGS S
Sbjct: 276 LKKDAPISPASIASSSSTPSSKSKELSLNEKSTTPVSKSNTPTPRTDAPTPGSNS 330


>AL353813-5|CAI41315.1|  764|Homo sapiens transducin-like enhancer
           of split 4 (E(sp1) homolog, Drosophila) protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 443 LRDCAKISPRKSSASQSTIGSKRDPLRRSGEKLSGLSMG*C-TRRTLAPSPGSTS 604
           L+  A ISP   ++S ST  SK   L  + +  + +S     T RT AP+PGS S
Sbjct: 276 LKKDAPISPASIASSSSTPSSKSKELSLNEKSTTPVSKSNTPTPRTDAPTPGSNS 330


>AB033087-1|BAA86575.1|  787|Homo sapiens KIAA1261 protein protein.
          Length = 787

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 443 LRDCAKISPRKSSASQSTIGSKRDPLRRSGEKLSGLSMG*C-TRRTLAPSPGSTS 604
           L+  A ISP   ++S ST  SK   L  + +  + +S     T RT AP+PGS S
Sbjct: 299 LKKDAPISPASIASSSSTPSSKSKELSLNEKSTTPVSKSNTPTPRTDAPTPGSNS 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,838,591
Number of Sequences: 237096
Number of extensions: 1728268
Number of successful extensions: 2591
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)