Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0759.Seq
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...   112   9e-24
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    69   1e-10
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    59   1e-07
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    59   1e-07
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    57   5e-07
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    55   2e-06
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    47   5e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    46   0.001
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria...    44   0.005
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    35   2.3  
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   9.2  

>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score =  112 bits (269), Expect = 9e-24
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +1

Query: 556 GKCARNPNLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLF 711
           GKCARNP LFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLF
Sbjct: 28  GKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLF 79


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 37/64 (57%), Positives = 38/64 (59%)
 Frame = -1

Query: 522 IKRGGVVVTRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRFSALRHLD 343
           +   GVVVTRSV                       AGFPRQALNRGLPLGFRFSALRHLD
Sbjct: 9   LSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRFSALRHLD 68

Query: 342 PKKL 331
           PKKL
Sbjct: 69  PKKL 72


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 2/31 (6%)
 Frame = +2

Query: 2   PPFASWRNSEEARTDRPSQQLRSL--QWRMA 88
           PPFASWRNSEEARTDRPSQQLRSL  +WR A
Sbjct: 50  PPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 2/31 (6%)
 Frame = +2

Query: 2   PPFASWRNSEEARTDRPSQQLRSL--QWRMA 88
           PPFASWRNSEEARTDRPSQQLRSL  +WR A
Sbjct: 32  PPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 56.8 bits (131), Expect = 5e-07
 Identities = 26/31 (83%), Positives = 27/31 (87%), Gaps = 2/31 (6%)
 Frame = +2

Query: 2   PPFASWRNSEEARTDRPSQQLRSL--QWRMA 88
           PPFASWRNSEEARTDRPSQQLR L  +WR A
Sbjct: 92  PPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 2   PPFASWRNSEEARTDRPSQQLRSL 73
           PPFASWRNSEEARTDRPSQQLRSL
Sbjct: 46  PPFASWRNSEEARTDRPSQQLRSL 69


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 21/25 (84%), Positives = 23/25 (92%), Gaps = 2/25 (8%)
 Frame = +2

Query: 17  WRNSEEARTDRPSQQLRSL--QWRM 85
           WRNSEEARTDRPSQQLRSL  +WR+
Sbjct: 47  WRNSEEARTDRPSQQLRSLNGEWRL 71


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +2

Query: 26  SEEARTDRPSQQLRSLQWRMA 88
           SEEARTDRPSQQLRSL+WRMA
Sbjct: 38  SEEARTDRPSQQLRSLKWRMA 58


>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
          Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
          PE36
          Length = 45

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 21/25 (84%), Positives = 22/25 (88%)
 Frame = -3

Query: 76 LQAAQLLGRAIGAGLFAITPAGERG 2
          +QAAQLLGRAIGAGLFAITP  E G
Sbjct: 14 IQAAQLLGRAIGAGLFAITPEFELG 38


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 2   PPFASWRNSEEARTDRPSQQLRSL 73
           PPF SWR+ E A+ DRPS Q ++L
Sbjct: 39  PPFHSWRDVESAQKDRPSPQQQTL 62


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 202 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 89
           +++F L G L    +WLKN+    KF++ F ++L L +
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,932,675
Number of Sequences: 1657284
Number of extensions: 13116631
Number of successful extensions: 31574
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31571
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)