Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0758.Seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 136 1e-32
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 5e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 115 3e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 75 4e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 58 9e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.87
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.7
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 29 3.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.6
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.1
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 28 8.1
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 136 bits (330), Expect = 1e-32
Identities = 64/89 (71%), Positives = 74/89 (83%)
Frame = +1
Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFDXVSDGGKPKIKVAYKGEDKTFFPEEVSSM 420
P+ FDAKRLIGR+++DATVQ+DMK WPF +SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507
VL KMKETAEAYLG+ V +AVITVPAYFN
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFN 151
Score = 131 bits (317), Expect = 4e-31
Identities = 59/66 (89%), Positives = 63/66 (95%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 236 MNPNNT 253
+NP NT
Sbjct: 61 LNPENT 66
Score = 108 bits (259), Expect = 5e-24
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
SQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSIL
Sbjct: 153 SQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSIL 210
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 136 bits (329), Expect = 2e-32
Identities = 63/66 (95%), Positives = 64/66 (96%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 236 MNPNNT 253
MNP NT
Sbjct: 61 MNPENT 66
Score = 134 bits (324), Expect = 6e-32
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +1
Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFDXVSDGGKPKIKVAYKGEDKTFFPEEVSSM 420
P+ FDAKRLIGRKF+D V DM HWPF + +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507
VLTKMKETAEAYLG V +AV+TVPAYF+
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFH 151
Score = 106 bits (255), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
SQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+L
Sbjct: 153 SQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVL 210
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 134 bits (325), Expect = 5e-32
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 236 MNPNNT 253
MNP NT
Sbjct: 61 MNPTNT 66
Score = 110 bits (265), Expect = 9e-25
Identities = 62/114 (54%), Positives = 72/114 (63%), Gaps = 25/114 (21%)
Frame = +1
Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFDXVSDGGKPKIKVAYKGEDKTFFPEEV--- 411
P FDAKRLIGR+F+D V+ DMKHW F+ V++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 412 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 507
SSMVL KMKETAEAYLG V +AV+TVPAYFN
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFN 176
Score = 107 bits (257), Expect = 8e-24
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
SQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L
Sbjct: 246 SQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVL 303
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 406 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 507
++SSMVL KMKETAEAYLG V +AV+TVPAYFN
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFN 244
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 115 bits (277), Expect = 3e-26
Identities = 55/89 (61%), Positives = 67/89 (75%)
Frame = +1
Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFDXVSDGGKPKIKVAYKGEDKTFFPEEVSSM 420
P+ FDAKRLIGR ++D +VQ D+K +PF V KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507
VLTKMKETAEAYLGK V +AV+TVPAYFN
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFN 849
Score = 104 bits (249), Expect = 8e-23
Identities = 48/61 (78%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 250
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 251 T 253
T
Sbjct: 764 T 764
Score = 99.1 bits (236), Expect = 3e-21
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+L
Sbjct: 851 AQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLL 907
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +3
Query: 513 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLL 239
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 236 MNPNNT 253
+NP NT
Sbjct: 90 INPKNT 95
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +1
Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFDXVSDG-GKPKIKVAYKGEDKTFFPEEVSS 417
P+ +DAKR IG+ F + K + F +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 418 MVLTKMKETAEAYLGKTVQNAVITVPAYFNALKDKPQKMQVPSLA 552
V+ K++ AE L TV AV++VPA F+ +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEFD-IKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 KRLIGRKFEDATVQADMKHWPFDXVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 441
KR IGRKF D VQ ++ H P+ V I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 442 TAEAYLGKTVQNAVITVPAYF 504
TAE L V + VI+VP+Y+
Sbjct: 187 TAEIALKTKVTDCVISVPSYY 207
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 229
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 513 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVSI 680
QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I
Sbjct: 211 QRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCI 269
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +1
Query: 361 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 507
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FN
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFN 50
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/68 (52%), Positives = 39/68 (57%), Gaps = 26/68 (38%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDKK 617
+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLDK
Sbjct: 52 AQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKA 111
Query: 618 --GTGERN 635
G ERN
Sbjct: 112 RGGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 125 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTN---SMPNVSSDVSSKM 295
G IIAND G+R TP+ VAF+DTE+LI + N N S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 296 L 298
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 355 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 507
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFN 117
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +3
Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVS 677
++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +
Sbjct: 119 AERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVAT 178
Query: 678 IL 683
I+
Sbjct: 179 IV 180
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 34.3 bits (75), Expect = 0.093
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 420 GAYENEG-NCRSLSWQNCAECSYHGSRVLQCSQRQAT--KDAGTISGLNVLRIINEPTAA 590
GA +N + SL W C + YHG +V++C+ A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 591 AIAYGLDKKGTG 626
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 636 VLIFDLGGGTFDVSIL 683
+ ++DLGGGTFD+SIL
Sbjct: 2 IAVYDLGGGTFDISIL 17
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 134 EIIANDQGNRTTPSYVAFT-DTERL 205
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 242 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 144
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 95 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTNSMPNVS 274
T++ + H I+ N G +TP + T A + + M P N V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 275 SDVSSKMLLCKP 310
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 2 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 88
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 449 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTXSKGQCFMSACTVASSNLRP 276
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 644 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 558
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 352 KPKIKVA-YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNALKDKPQ 528
+P K A Y +D+T E + + LT + ++ NAV P Y++ L+DKP
Sbjct: 435 RPADKQAEYLEDDETDGFESGALLNLTPARSRNPVQRNESYCNAVSRSPGYYSPLRDKPA 494
Query: 529 K 531
+
Sbjct: 495 R 495
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,894,129
Number of Sequences: 59808
Number of extensions: 516855
Number of successful extensions: 1618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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