Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0758.Seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   106   7e-25
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.9  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  106 bits (254), Expect = 7e-25
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +3

Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 683
           SQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDLGGGTFDVSIL
Sbjct: 13  SQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 70



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +1

Query: 475 NAVITVPAYFN 507
           +AVITVPAYFN
Sbjct: 1   DAVITVPAYFN 11


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 55   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 156
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837



 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 459  WQNCAECSYHGSRVLQCSQRQAT 527
            ++NC   +Y G R + C   Q+T
Sbjct: 3159 YRNCLPLTYDGVRGISCDGEQST 3181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,244
Number of Sequences: 2352
Number of extensions: 16441
Number of successful extensions: 35
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)