Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0756.Seq
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    66   3e-13
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    66   3e-13
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    60   2e-11
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    29   0.039
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.84 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 66.1 bits (154), Expect = 3e-13
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +1

Query: 640 LSFDLGGGTFDVSILTIEDGIFEVKSTAGDTHFG 741
           L FDLGGGTFDVS+LTIE+GIFEVK+TAGDTH G
Sbjct: 24  LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG 57



 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +3

Query: 570 INEPTAAAIAYGLDKKGTGERNVLIF 647
           INEPTAAAIAYGLDKK   ERNVLIF
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIF 26


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 66.1 bits (154), Expect = 3e-13
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +1

Query: 640 LSFDLGGGTFDVSILTIEDGIFEVKSTAGDTHFG 741
           L FDLGGGTFDVS+LTIE+GIFEVK+TAGDTH G
Sbjct: 24  LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG 57



 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +3

Query: 570 INEPTAAAIAYGLDKKGTGERNVLIF 647
           INEPTAAAIAYGLDKK   ERNVLIF
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIF 26


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 59.7 bits (138), Expect = 2e-11
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +1

Query: 640 LSFDLGGGTFDVSILTIEDGIFEVKSTAGDTHFG 741
           L +DLGGGTFDVSILTI++G+FEV +T+GDTH G
Sbjct: 23  LVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLG 56



 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +3

Query: 570 INEPTAAAIAYGLDKKGTGERNVLIF 647
           INEPTAAAIAYGLDKKG  E+N+L++
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVY 25


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +1

Query: 163 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHKFDAKRLI--GRKFEDATVQADMKHWPFEV 336
           DH  +  +H +  SH   +QEP G     H F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 337 VS 342
           +S
Sbjct: 399 LS 400


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 629  TKCTYLLTSAAVPSTCPSLPSRMVSSR*NPPPATPT 736
            T+C    +S   PST P +P + V++  + P  T T
Sbjct: 2282 TECHPDASSTMAPSTTPMVPDKPVTTTTSRPIGTDT 2317


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 343 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 468
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 115 LPAREGGDHRQRPGQQDH 168
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 525 TKDAGTISGLNVLRIINEPTAA 590
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,164
Number of Sequences: 336
Number of extensions: 4314
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)