Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0756.Seq
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    82   2e-17
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   10.0 
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   10.0 

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 81.8 bits (193), Expect = 2e-17
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +3

Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 647
           SQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIF
Sbjct: 13  SQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIF 58



 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +1

Query: 475 NAVITVPAYFNALKDKPQKMQVPSLA*TFSESSMNXXXXXXXXXXXXXXXENEM-YLSFD 651
           +AVITVPAYFN  + +  K    ++A       +N               + E   L FD
Sbjct: 1   DAVITVPAYFNDSQRQATK-DAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFD 59

Query: 652 LGGGTFDVSILTIEDG 699
           LGGGTFDVSILTI++G
Sbjct: 60  LGGGTFDVSILTIDEG 75


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 55   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 156
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 459  WQNCAECSYHGSRVLQCSQRQAT 527
            ++NC   +Y G R + C   Q+T
Sbjct: 3159 YRNCLPLTYDGVRGISCDGEQST 3181


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 7/27 (25%), Positives = 12/27 (44%)
 Frame = -2

Query: 734 WVSPAVDFTSKIPSSMVRMDTSKVPPP 654
           W+ P    T+ +P++         PPP
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPP 247


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 7/27 (25%), Positives = 12/27 (44%)
 Frame = -2

Query: 734 WVSPAVDFTSKIPSSMVRMDTSKVPPP 654
           W+ P    T+ +P++         PPP
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPP 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,710
Number of Sequences: 2352
Number of extensions: 18867
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)