Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0754.Seq
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22PM8 Cluster: Putative uncharacterized protein; n=2; ...    40   0.076
UniRef50_Q8IBN9 Cluster: Putative uncharacterized protein MAL7P1...    39   0.10 
UniRef50_Q4UAE8 Cluster: Exonuclease 1, putative; n=3; Theileria...    35   1.6  
UniRef50_Q4CTC4 Cluster: Putative uncharacterized protein; n=6; ...    33   5.0  
UniRef50_A0CH24 Cluster: Chromosome undetermined scaffold_18, wh...    33   8.7  

>UniRef50_Q22PM8 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 907

 Score = 39.5 bits (88), Expect = 0.076
 Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +3

Query: 108 ITN*FSFLHCKLNNLIYFHKFVFYTIIKYNENYLSPRECCLKRH*HCNVTCQKKHILMSK 287
           I++ F+ L   +NNLI+  ++ FY+ IK +E  ++  +  L +   C+    KK + +SK
Sbjct: 539 ISDVFNRLLLIINNLIFMGQYKFYSKIKISEKNINKIQIALSKQMSCSPKSFKKILELSK 598

Query: 288 CHLNYQVSSIFL-KRTF**CFNK 353
            + + Q++S+ +  +TF  C  +
Sbjct: 599 INPSLQINSLVINSQTFPKCLKQ 621


>UniRef50_Q8IBN9 Cluster: Putative uncharacterized protein
           MAL7P1.112; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.112 - Plasmodium
           falciparum (isolate 3D7)
          Length = 952

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
 Frame = +3

Query: 18  HIYSNQYSYNVTFYI*TMPI------QNNLSTNTYIITN*--FSFLHCKLNNLIYFHKFV 173
           HIY+N    N  +++    +       ++L    YII N   F +LHC L  LIY + + 
Sbjct: 293 HIYNNIQKSNFDYFLCMYNLLSQRKEDSSLFLLNYIIPNYNYFYYLHCFLY-LIYHYNY- 350

Query: 174 FYTIIKYNENYLSPRECCLKRH 239
           F  IIKYN+NY +    C+K +
Sbjct: 351 FQNIIKYNDNYSNFYSSCIKNN 372


>UniRef50_Q4UAE8 Cluster: Exonuclease 1, putative; n=3;
           Theileria|Rep: Exonuclease 1, putative - Theileria
           annulata
          Length = 868

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 24/80 (30%), Positives = 37/80 (46%)
 Frame = +3

Query: 15  LHIYSNQYSYNVTFYI*TMPIQNNLSTNTYIITN*FSFLHCKLNNLIYFHKFVFYTIIKY 194
           ++ Y+N   YN+ +Y    P  NN +TNTY +TN F+  +    N  Y + +  +T    
Sbjct: 5   IYYYTN---YNINYY---QPYYNNFNTNTYNLTNNFTNNNTNTTNFTYNNTYNNFTNNFI 58

Query: 195 NENYLSPRECCLKRH*HCNV 254
             N    R   +K    CNV
Sbjct: 59  TNNISRNRYNEIKYRKICNV 78


>UniRef50_Q4CTC4 Cluster: Putative uncharacterized protein; n=6;
           Trypanosomatidae|Rep: Putative uncharacterized protein -
           Trypanosoma cruzi
          Length = 219

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 243 HCNVTCQKKHILMSKCHLNYQVSSIFL 323
           H N +CQK   ++SKCHL+   SS+ L
Sbjct: 47  HVNASCQKSRCILSKCHLDSLPSSLAL 73


>UniRef50_A0CH24 Cluster: Chromosome undetermined scaffold_18, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_18,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 199

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
 Frame = +3

Query: 3   FFCLLHIYSNQYSYNVTFYI*TMPIQNNLSTNTYIITN*FSFLHCKLNNLIYF-----HK 167
           + C      N +  NVT  I    +Q N  T  + I N  S +H  LN + Y+      +
Sbjct: 69  YLCFQFGTINYFGINVTLSI----LQQNHLTIYFEIIN-ASIIHFSLNPIQYYVTVQQQR 123

Query: 168 FVFYTIIKY-NENYLSPRECCLKRH*HC-NVTCQKKHILMSKCHLNYQVSSIFLKRTF 335
           F +  II    +  +SP    L  +    N+TC +K    SKC  N Q   IFL   F
Sbjct: 124 FKYLIIIALVKDQNISPTLKNLVSYSSIVNMTCDQKLKFNSKCQKNEQQMCIFLNTQF 181


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,668,038
Number of Sequences: 1657284
Number of extensions: 11477625
Number of successful extensions: 19524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19516
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)