Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0754.Seq
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0462 + 9583558-9584910                                           30   2.0  
12_01_0371 - 2851186-2851491,2851582-2851765,2851967-2852156,285...    29   2.6  

>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 183 WYKKQIYGNKSSYLVYNAKN*INWL 109
           WY + + G K S +V NAK  + WL
Sbjct: 416 WYNESVAGGKESQVVKNAKPFVEWL 440


>12_01_0371 -
           2851186-2851491,2851582-2851765,2851967-2852156,
           2853375-2853613,2853862-2853947,2854720-2854827,
           2854929-2855031,2855152-2855213
          Length = 425

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 452 KADNFIYDLCNLCKSLVLQYS-MSKILASQRDALF 351
           + D FIY LC++    VL+ S +  ILAS R+ +F
Sbjct: 101 EVDEFIYQLCDVTGDEVLERSDLETILASIRETIF 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,878,778
Number of Sequences: 37544
Number of extensions: 263477
Number of successful extensions: 367
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)