Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0754.Seq
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   6.9  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   9.1  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    23   9.1  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 239 LTLQCHMSKKTYFNVKMSFKLSSVKHFP*TYVL 337
           LT+  HM +    N++  F LS  + FP  Y L
Sbjct: 237 LTVFVHMLRWQLANLEFEFHLSLAERFPRYYSL 269


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +3

Query: 561 YIR*NLNRNCTSHESIQ*KDFLFKSESFG 647
           Y+R N++ N  +H   + ++F +K+ +FG
Sbjct: 114 YLRVNIDSNPVNHIMDRMENFRYKTAAFG 142


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 280 CQNVI*IIKCQAFSLNVRFDNVL 348
           CQNV+ + K    +LN++  N++
Sbjct: 12  CQNVLLVAKKLGIALNIKKTNIM 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,975
Number of Sequences: 2352
Number of extensions: 13363
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)