Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0750.Seq
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 327 KFYSQQPNLPNLNA*RHIYILSIYLKTVCVVWDQLTQTIVNS 202
           K Y  +     + A R I   S Y+K  CV+ D  TQ I N+
Sbjct: 231 KLYPLRKATAKIAAKRLIEDFSGYIKPKCVLSDHGTQFISNT 272


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 151 YFFIKD*IFIVYLDFMPRIYYSLCQLI 231
           YF+    IF V+L F+  IY+  C  I
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFI 174



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 172 IFIVYLDFMPRIYYSLCQLI 231
           IF ++L F+  IYY  C LI
Sbjct: 274 IFTMHLLFLLCIYYFYCALI 293



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 88  FYLAIQIVIINYKHFFQCFFITITIRFLL 2
           FY A  I++  Y  ++     T+ + FLL
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLL 131



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 151 YFFIKD*IFIVYLDFMPRIYYSLCQL 228
           YF+    IF V+L F+  IYY +  L
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPL 140


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 587 MLGLECVYKTKYFLTI*QISY 649
           M G+EC  K  +FL I ++S+
Sbjct: 503 MCGVECSDKVSFFLHIARVSH 523


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 67 VIINYKHFFQCFFITITIR 11
          V++ + HF   F ITI IR
Sbjct: 25 VLVTFAHFICLFPITINIR 43


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 395 SNNVKYSKKQATYFSKAISNVF 330
           + N+ YSK+  T   K  SN+F
Sbjct: 82  AKNLLYSKQIVTILKKTKSNIF 103


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 29  KEALKEMLVIYNNNLYCQ 82
           KEA K +++ Y    YCQ
Sbjct: 279 KEAQKSLVLTYEMRWYCQ 296


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 307 RLLRVKFSNTLLIALEK 357
           R LR  ++NT L+ LEK
Sbjct: 5   RRLRTAYTNTQLLELEK 21


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 307 RLLRVKFSNTLLIALEK 357
           R LR  ++NT L+ LEK
Sbjct: 136 RRLRTAYTNTQLLELEK 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,163
Number of Sequences: 336
Number of extensions: 3861
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)