Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0750.Seq
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    31   2.2  
AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p pro...    30   2.8  
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA...    30   2.8  

>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 134 LEMSLTSHYLRKIFTILSGNTDCYYKLQAFLSMLLYNNYYSFL 6
           LE+S+  HYL+   TI   N D YY++   L+  L   YY F+
Sbjct: 440 LEVSMAGHYLKDGKTISLYNEDGYYRVGRNLARTLL-QYYRFI 481


>AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p protein.
          Length = 1436

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 237  VWDQLTQTIVNSRHKIQVHYKDLIFDKKITSKSVT*NVID 118
            +WD++   IVNS HKIQ+       +KKI    V   V D
Sbjct: 1382 IWDRIELIIVNSGHKIQIIRMKTDANKKIVGTVVPPAVYD 1421


>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
            protein.
          Length = 1801

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 237  VWDQLTQTIVNSRHKIQVHYKDLIFDKKITSKSVT*NVID 118
            +WD++   IVNS HKIQ+       +KKI    V   V D
Sbjct: 1747 IWDRIELIIVNSGHKIQIIRMKTDANKKIVGTVVPPAVYD 1786


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,693,797
Number of Sequences: 53049
Number of extensions: 553748
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)