BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0750.Seq
(734 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.9
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 3.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 3.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.2
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 22 6.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.1
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 98 IFTILSGNTDCYYKLQAFLSMLLYN 24
I+TIL+ + +Y L ++ LLYN
Sbjct: 325 IYTILTYMSGVFYYLSTTVNPLLYN 349
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNINYIEQI 111
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 193 FMPRIYYSLCQLIPDNAYS 249
FMPR+Y L ++PD ++
Sbjct: 228 FMPRLYDLLGYVMPDRTFA 246
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI ++ ++
Sbjct: 312 NYNNYNNNYKPLYYNINYIEQI 333
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 692 NILFVNELRALSQTYMKFVK*SKNI 618
N +F+N L+ L Q Y+K K K I
Sbjct: 337 NTMFINILKFLKQKYVKNSKLEKVI 361
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 734 NLN*ITTNYRVLYLNILFVNEL 669
N N NY+ LY NI+ + ++
Sbjct: 323 NYNNYNNNYKPLYYNIINIEQI 344
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 340 LIALEK*VACFFEYLTL 390
LI + K + CFF+Y T+
Sbjct: 113 LIKISKILECFFKYKTI 129
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 713 NYRVLYLNILFVNEL 669
NYR LY NI ++ ++
Sbjct: 103 NYRKLYYNINYIEQI 117
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 398 HSNNVKYSKKQATYFSKAISNV 333
H+NN KY+ Y K N+
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 398 HSNNVKYSKKQATYFSKAISNV 333
H+NN KY+ Y K N+
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 398 HSNNVKYSKKQATYFSKAISNV 333
H+NN KY+ Y K N+
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 398 HSNNVKYSKKQATYFSKAISNV 333
H+NN KY+ Y K N+
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNI 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,272
Number of Sequences: 438
Number of extensions: 4211
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -