Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0749.Seq
(774 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7NRW0 Cluster: ATP-dependent Clp protease, ATP-binding... 99 6e-20
UniRef50_P0AFK3 Cluster: Protein pnuC; n=71; Gammaproteobacteria... 87 6e-16
UniRef50_P05444 Cluster: ClpA homolog protein; n=335; Bacteria|R... 87 6e-16
UniRef50_Q6D7E5 Cluster: Zinc transporter zitB; n=40; Enterobact... 85 2e-15
UniRef50_A4M8G9 Cluster: ATPase AAA-2 domain protein; n=2; Petro... 75 1e-12
UniRef50_A6DEF7 Cluster: ENDOPEPTIDASE CLP ATP-BINDING CHAIN A; ... 74 5e-12
UniRef50_Q5PAJ8 Cluster: ATP-dependent clp protease ATP-binding ... 73 8e-12
UniRef50_A4E9C6 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q8KFX9 Cluster: ATP-dependent Clp protease, ATP-binding... 70 6e-11
UniRef50_A4FPZ1 Cluster: Clp protease ATP binding subunit; n=2; ... 70 6e-11
UniRef50_A6KY28 Cluster: ATP-dependent Clp protease, ATP-binding... 69 1e-10
UniRef50_Q97I30 Cluster: ATP-dependent Clp proteinase; n=5; Bact... 67 4e-10
UniRef50_P42762 Cluster: ERD1 protein, chloroplast precursor; n=... 67 5e-10
UniRef50_O83779 Cluster: ATP-dependent Clp protease subunit A; n... 66 9e-10
UniRef50_Q8EU05 Cluster: Chaperone protein clpB; n=6; Bacilli|Re... 66 9e-10
UniRef50_P31541 Cluster: ATP-dependent Clp protease ATP-binding ... 66 9e-10
UniRef50_Q8NMA0 Cluster: ATPases with chaperone activity, ATP-bi... 65 2e-09
UniRef50_Q7XL03 Cluster: OJ000315_02.14 protein; n=2; Oryza sati... 65 2e-09
UniRef50_A2XT33 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_A6G683 Cluster: Probable ATP-dependent Clp protease; n=... 64 4e-09
UniRef50_Q9PKA8 Cluster: Probable ATP-dependent Clp protease ATP... 64 4e-09
UniRef50_A0K1M3 Cluster: ATPase AAA-2 domain protein; n=6; Actin... 63 6e-09
UniRef50_Q7VBI5 Cluster: ATPase with chaperone activity ATP-bind... 62 1e-08
UniRef50_A1STR4 Cluster: Chaperone endopeptidase Clp ATP-binding... 62 1e-08
UniRef50_P37571 Cluster: Negative regulator of genetic competenc... 62 1e-08
UniRef50_Q7V2A3 Cluster: Chaperone protein clpB; n=6; Bacteria|R... 62 1e-08
UniRef50_Q0P9E6 Cluster: ATP-dependent Clp protease ATP-binding ... 62 2e-08
UniRef50_Q4UAC3 Cluster: ClpB protein, putative; n=1; Theileria ... 62 2e-08
UniRef50_P74459 Cluster: Chaperone protein clpB 1; n=43; cellula... 62 2e-08
UniRef50_Q53N47 Cluster: ATPase, AAA family, putative; n=2; Oryz... 61 3e-08
UniRef50_Q8DG71 Cluster: Chaperone protein clpB 2; n=366; cellul... 61 3e-08
UniRef50_A7HJU2 Cluster: ATPase AAA-2 domain protein; n=2; Therm... 61 3e-08
UniRef50_O78410 Cluster: ATP-dependent Clp protease ATP-binding ... 60 6e-08
UniRef50_Q7NKD6 Cluster: Endopeptidase Clp ATP-binding chain; n=... 60 8e-08
UniRef50_Q7VFW1 Cluster: ATP-dependent CLP protease ClpB; n=4; E... 59 1e-07
UniRef50_Q73KU3 Cluster: ATP-dependent Clp protease, ATP-binding... 59 1e-07
UniRef50_A7HFK9 Cluster: ATPase AAA-2 domain protein; n=42; Bact... 59 1e-07
UniRef50_Q4FYX5 Cluster: Serine peptidase, putative; n=7; Trypan... 59 1e-07
UniRef50_Q8KA87 Cluster: Probable chaperone protein clpB 2; n=15... 59 1e-07
UniRef50_A5WFU1 Cluster: ATP-dependent Clp protease, ATP-binding... 59 1e-07
UniRef50_P33416 Cluster: Heat shock protein 78, mitochondrial pr... 59 1e-07
UniRef50_Q7VBL0 Cluster: Chaperone protein clpB; n=9; Bacteria|R... 59 1e-07
UniRef50_Q4U8P5 Cluster: Endopeptidase (CLP homologue) ATP-bindi... 58 2e-07
UniRef50_Q88XZ5 Cluster: ATP-dependent Clp protease, ATP-binding... 58 2e-07
UniRef50_Q8F509 Cluster: Chaperone protein clpB; n=26; Bacteria|... 58 2e-07
UniRef50_P35594 Cluster: ATP-dependent Clp protease ATP-binding ... 58 3e-07
UniRef50_Q4L3I4 Cluster: ATP-dependent Clp protease ATP-binding ... 58 3e-07
UniRef50_Q7VJY3 Cluster: Chaperone protein clpB; n=52; Bacteria|... 58 3e-07
UniRef50_A6QBZ7 Cluster: ATP-dependent Clp protease, ATP-binding... 57 4e-07
UniRef50_Q01H11 Cluster: CLPB1_SYNEL Chaperone clpB 1 dbj|BAC089... 57 4e-07
UniRef50_P42730 Cluster: Heat shock protein 101; n=112; cellular... 57 4e-07
UniRef50_Q7VDY2 Cluster: ATPases with chaperone activity, ATP-bi... 57 6e-07
UniRef50_Q5FHW6 Cluster: ATP-dependent protease; n=4; Lactobacil... 57 6e-07
UniRef50_A7HAC7 Cluster: ATPase AAA-2 domain protein; n=4; Cysto... 57 6e-07
UniRef50_Q7MXY4 Cluster: ATP-dependent Clp protease, ATP-binding... 56 1e-06
UniRef50_A1A3G2 Cluster: Chaperone clpB; n=2; Bifidobacterium ad... 56 1e-06
UniRef50_A7H7Z7 Cluster: ATPase AAA-2 domain protein; n=11; Bact... 56 1e-06
UniRef50_Q73L29 Cluster: ATPase, AAA family; n=2; Treponema|Rep:... 55 2e-06
UniRef50_A5Z672 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_O77222 Cluster: Heat shock protein hsp104; n=5; cellula... 55 2e-06
UniRef50_A3AJA8 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q96TW3 Cluster: HSP100 protein; n=1; Phycomyces blakesl... 55 2e-06
UniRef50_O83110 Cluster: Chaperone protein clpB; n=21; cellular ... 55 2e-06
UniRef50_UPI00015B91DB Cluster: UPI00015B91DB related cluster; n... 54 3e-06
UniRef50_Q9RVB2 Cluster: ATP-dependent Clp protease, ATP-binding... 54 3e-06
UniRef50_Q899V4 Cluster: Negative regulator of genetic competenc... 54 3e-06
UniRef50_O24875 Cluster: ATP-dependent C1p protease; n=4; Helico... 54 3e-06
UniRef50_A0RNV1 Cluster: ATP-dependent Clp protease ATP-binding ... 54 3e-06
UniRef50_Q015E8 Cluster: AAA ATPase, central region:Clp, N termi... 54 3e-06
UniRef50_Q2GE93 Cluster: ATP-dependent Clp protease, ATP-binding... 54 4e-06
UniRef50_Q0LQN6 Cluster: ATPase AAA-2; n=1; Herpetosiphon aurant... 54 4e-06
UniRef50_Q00GN0 Cluster: Plastid Clp protease; n=1; Karenia brev... 54 4e-06
UniRef50_Q9X1B1 Cluster: ATP-dependent Clp protease, ATPase subu... 54 5e-06
UniRef50_A5IZ65 Cluster: ClpB; n=6; Mycoplasma|Rep: ClpB - Mycop... 53 7e-06
UniRef50_P49574 Cluster: ATP-dependent Clp protease ATP-binding ... 53 7e-06
UniRef50_Q5KDZ1 Cluster: Chaperone, putative; n=2; Filobasidiell... 53 9e-06
UniRef50_Q89YY3 Cluster: Chaperone protein clpB; n=112; Bacteria... 53 9e-06
UniRef50_Q7U3T3 Cluster: Chaperone protein clpB 2; n=10; Bacteri... 53 9e-06
UniRef50_P31540 Cluster: Heat shock protein HSP98; n=23; Dikarya... 52 2e-05
UniRef50_A7I2C9 Cluster: ATP-dependent CLP protease ATP-binding ... 51 3e-05
UniRef50_A3CMZ1 Cluster: ATPases with chaperone activity, ATP-bi... 51 3e-05
UniRef50_Q7BM22 Cluster: STMD1.46 protein; n=3; Salmonella|Rep: ... 50 5e-05
UniRef50_A4BEV2 Cluster: Putative ATPase subunit of ATP-dependen... 50 5e-05
UniRef50_Q9KAV7 Cluster: ATP-dependent proteinase; n=1; Bacillus... 50 6e-05
UniRef50_Q7QSI1 Cluster: GLP_64_7313_4665; n=1; Giardia lamblia ... 50 6e-05
UniRef50_P31539 Cluster: Heat shock protein 104; n=14; Ascomycot... 50 6e-05
UniRef50_Q8DTC7 Cluster: Chaperone protein clpB; n=1; Streptococ... 50 6e-05
UniRef50_Q7AJA9 Cluster: Chaperone protein clpB; n=22; Bacteria|... 50 6e-05
UniRef50_O51342 Cluster: ATP-dependent Clp protease, subunit A; ... 50 9e-05
UniRef50_A6NVT1 Cluster: Putative uncharacterized protein; n=1; ... 50 9e-05
UniRef50_A5UYN2 Cluster: ATPase AAA-2 domain protein precursor; ... 50 9e-05
UniRef50_Q3LW37 Cluster: ATP binding subunit of Clp protease; n=... 50 9e-05
UniRef50_Q7NAZ3 Cluster: Chaperone protein clpB; n=8; Mollicutes... 49 1e-04
UniRef50_Q826F2 Cluster: Chaperone protein clpB 2; n=51; cellula... 49 1e-04
UniRef50_Q7N4N8 Cluster: Similar to ClpA/B-type chaperone; n=1; ... 49 1e-04
UniRef50_Q62G32 Cluster: ClpA/B type protease; n=18; Bacteria|Re... 49 1e-04
UniRef50_A4FG52 Cluster: Clp protease ATP binding subunit; n=1; ... 49 1e-04
UniRef50_A7TPM4 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q74G19 Cluster: ClpB protein, putative; n=5; Proteobact... 48 2e-04
UniRef50_Q39K50 Cluster: Chaperonin clpA/B/, ATPase; n=27; Prote... 48 2e-04
UniRef50_O51774 Cluster: ATP-dependent Clp protease, subunit C; ... 48 3e-04
UniRef50_UPI000049A1E8 Cluster: HSP101-related protein; n=8; Ent... 48 3e-04
UniRef50_Q1WR72 Cluster: ATP-dependent Clp protease; n=1; Lactob... 48 3e-04
UniRef50_A0NQ21 Cluster: ATP-dependent Clp protease ATP-binding ... 48 3e-04
UniRef50_O67588 Cluster: Chaperone protein clpB; n=2; Aquifex ae... 48 3e-04
UniRef50_A7JYI1 Cluster: ATPases with chaperone activity, ATP-bi... 47 5e-04
UniRef50_Q06716 Cluster: ATP-dependent Clp protease ATP-binding ... 46 8e-04
UniRef50_Q882S7 Cluster: ClpB protein, putative; n=3; Gammaprote... 46 0.001
UniRef50_Q5GYC2 Cluster: ClpB; n=24; Proteobacteria|Rep: ClpB - ... 46 0.001
UniRef50_Q6TKU1 Cluster: Aec27; n=17; Enterobacteriaceae|Rep: Ae... 46 0.001
UniRef50_Q1N528 Cluster: ATPase with chaperone activity, ATP-bin... 46 0.001
UniRef50_Q28MX2 Cluster: ATPase AAA-2; n=3; Alphaproteobacteria|... 45 0.002
UniRef50_Q0WCW6 Cluster: Clp ATPase; n=21; Proteobacteria|Rep: C... 45 0.002
UniRef50_A6B0S5 Cluster: ATPase with chaperone activity, ATP-bin... 45 0.002
UniRef50_Q9F746 Cluster: Chaperone protein clpB; n=42; Proteobac... 45 0.002
UniRef50_Q62CW1 Cluster: ATP-dependent Clp protease, ATP-binding... 45 0.002
UniRef50_Q2T6Y8 Cluster: ATP-dependent Clp protease, ATP-binding... 45 0.002
UniRef50_A7APH1 Cluster: Clp amino terminal domain containing pr... 45 0.002
UniRef50_Q2GIB0 Cluster: Cation efflux family protein; n=1; Anap... 44 0.003
UniRef50_A6FZR3 Cluster: ATP-dependent chaperone protein ClpB; n... 44 0.003
UniRef50_A3HMX2 Cluster: 200 kDa antigen p200, putative; n=1; Ps... 44 0.003
UniRef50_Q8D6U5 Cluster: ATPase with chaperone activity, ATP-bin... 44 0.004
UniRef50_A3P1S7 Cluster: Chaperone clpB; n=15; Burkholderia|Rep:... 44 0.006
UniRef50_Q8IM28 Cluster: ATP-dependent Clp protease, putative; n... 44 0.006
UniRef50_Q9I742 Cluster: Protein clpV1; n=12; Proteobacteria|Rep... 44 0.006
UniRef50_Q98IM7 Cluster: Probable ClpA/B-type protease; n=1; Mes... 43 0.007
UniRef50_A3A5U3 Cluster: Putative uncharacterized protein; n=2; ... 43 0.007
UniRef50_Q89P96 Cluster: ATP-dependent Clp protease ATP-binding ... 42 0.013
UniRef50_Q3JGS2 Cluster: ATP-dependent Clp protease ATP-binding ... 42 0.013
UniRef50_Q1ZER4 Cluster: ClpB protein; n=1; Psychromonas sp. CNP... 42 0.013
UniRef50_Q0PZG4 Cluster: ClpB protein; n=45; Gammaproteobacteria... 42 0.017
UniRef50_A7AW26 Cluster: Chaperone clpB, putative; n=1; Babesia ... 42 0.017
UniRef50_A6EIG8 Cluster: Putative ATP-dependent protease; n=1; P... 42 0.023
UniRef50_A6BUZ9 Cluster: Hsp100/Clp ATPase; n=11; Yersinia|Rep: ... 42 0.023
UniRef50_A3UGA9 Cluster: Cation efflux protein; n=3; Proteobacte... 42 0.023
UniRef50_A3CKB2 Cluster: ATPase with chaperone activity, ATP-bin... 42 0.023
UniRef50_Q7RAR9 Cluster: ATP-dependent Clp protease, ATPase subu... 42 0.023
UniRef50_A5K1F9 Cluster: ATP-dependent Clp protease, putative; n... 42 0.023
UniRef50_UPI0000DB7A0C Cluster: PREDICTED: similar to CG5130-PA,... 41 0.039
UniRef50_Q8E5L4 Cluster: Putative uncharacterized protein gbs099... 41 0.039
UniRef50_Q8SQU0 Cluster: HSP 101 RELATED PROTEIN; n=1; Encephali... 41 0.039
UniRef50_Q8U3B2 Cluster: Cation efflux system protein; n=5; cell... 40 0.052
UniRef50_Q64UX7 Cluster: Endopeptidase Clp ATP-binding chain B; ... 40 0.069
UniRef50_A3USD8 Cluster: Chaperonin clpA/B/, ATPase; n=6; Gammap... 40 0.091
UniRef50_Q3JV76 Cluster: 200 kDa antigen p200, putative; n=9; Bu... 39 0.12
UniRef50_Q7RDQ7 Cluster: ClpB protein; n=8; Plasmodium|Rep: ClpB... 39 0.12
UniRef50_A0GKI9 Cluster: Putative uncharacterized protein; n=5; ... 39 0.16
UniRef50_Q4ECE6 Cluster: Cation efflux family protein; n=12; Ric... 38 0.37
UniRef50_Q7MUS7 Cluster: Heavy metal efflux pump, CzcD family; n... 37 0.64
UniRef50_Q8ERA7 Cluster: Cation efflux system permease; n=14; Ba... 36 0.85
UniRef50_Q5NP70 Cluster: Cation efflux system protein; n=2; Zymo... 36 0.85
UniRef50_Q9LXS1 Cluster: Metal tolerance protein A2; n=17; rosid... 36 0.85
UniRef50_Q8NPQ1 Cluster: ATPases with chaperone activity, ATP-bi... 36 1.1
UniRef50_Q2GDZ9 Cluster: Putative ABC transporter, ATP-binding/p... 36 1.5
UniRef50_Q2NBG7 Cluster: Cation efflux system protein; n=3; Prot... 35 2.0
UniRef50_Q1ZSN3 Cluster: Cation diffusion facilitator family tra... 35 2.0
UniRef50_A7BTF1 Cluster: ClpA/B-type chaperone; n=1; Beggiatoa s... 35 2.6
UniRef50_A0DIG5 Cluster: Chromosome undetermined scaffold_51, wh... 35 2.6
UniRef50_Q5FM42 Cluster: Cation efflux protein; n=5; Lactobacill... 34 3.4
UniRef50_Q9ZT63 Cluster: Metal tolerance protein 1 (AtMTP1) (Zin... 34 3.4
UniRef50_Q7NRV3 Cluster: Probable cation efflux system; n=1; Chr... 34 4.5
UniRef50_Q03X61 Cluster: ATP-binding subunit of Clp protease and... 34 4.5
UniRef50_A5G751 Cluster: Cation diffusion facilitator family tra... 34 4.5
UniRef50_Q0E0M6 Cluster: Os02g0537400 protein; n=3; Oryza sativa... 34 4.5
UniRef50_Q54QU8 Cluster: Putative uncharacterized protein; n=2; ... 34 4.5
UniRef50_A4QRA6 Cluster: Putative uncharacterized protein; n=2; ... 34 4.5
UniRef50_A6Q136 Cluster: Cation efflux system protein, CDF famil... 33 6.0
UniRef50_Q5BCD5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q2HFW8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_UPI00015B56B9 Cluster: PREDICTED: similar to GM05135p; ... 33 7.9
UniRef50_Q9PF12 Cluster: Cobalt-zinc-cadmium resistance protein;... 33 7.9
UniRef50_A4VE48 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_A7I6Y5 Cluster: Cation diffusion facilitator family tra... 33 7.9
>UniRef50_Q7NRW0 Cluster: ATP-dependent Clp protease, ATP-binding
subunit; n=22; Proteobacteria|Rep: ATP-dependent Clp
protease, ATP-binding subunit - Chromobacterium
violaceum
Length = 760
Score = 99 bits (238), Expect = 6e-20
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+TV+I GLK ++ AHH V+YT YINDRHLPDKAIDVIDEAGA +
Sbjct: 356 VEQTVEILKGLKSRFEAHHGVKYTQSALSTAAELSARYINDRHLPDKAIDVIDEAGAAQK 415
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
++P S++KK +N ++IE +VA+IAR
Sbjct: 416 ILPKSRQKKVINKSEIEEIVAKIAR 440
Score = 60.5 bits (140), Expect = 5e-08
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+G +R IG+TTY E+ IFEKD AL+RRFQKID+TEP+
Sbjct: 318 NGSLRCIGATTYNEYRGIFEKDNALSRRFQKIDVTEPT 355
>UniRef50_P0AFK3 Cluster: Protein pnuC; n=71;
Gammaproteobacteria|Rep: Protein pnuC - Shigella
flexneri
Length = 239
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 1 FALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH 123
FALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH
Sbjct: 199 FALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH 239
>UniRef50_P05444 Cluster: ClpA homolog protein; n=335; Bacteria|Rep:
ClpA homolog protein - Rhodopseudomonas blastica
Length = 793
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V + ++I GLKP + HH++RYT YINDR LPD AIDVIDEAGA
Sbjct: 381 VPDAIKILMGLKPHFEEHHELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQH 440
Query: 688 LMPVSKRKKTVNVADIESVVARIARFQRR 774
L+ SKRKK + +IE+VVA+IAR R
Sbjct: 441 LVSDSKRKKVLGTKEIEAVVAKIARIPPR 469
Score = 62.9 bits (146), Expect = 9e-09
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFKSTM 535
GK+R +GSTTY+EF FEKDRAL+RRFQKID+ EPS K M
Sbjct: 344 GKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILM 389
>UniRef50_Q6D7E5 Cluster: Zinc transporter zitB; n=40;
Enterobacteriaceae|Rep: Zinc transporter zitB - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 320
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = -3
Query: 451 ENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHD 272
E++ ELL G + + L++ + IPEVRN+HHVH+W VGEKP+MTLH QV+PPHD
Sbjct: 202 ESIHELLEGTPSQLS--VEALQKDVTLNIPEVRNIHHVHLWQVGEKPMMTLHAQVVPPHD 259
Query: 271 HDALLDR 251
HDALL R
Sbjct: 260 HDALLRR 266
Score = 50.8 bits (116), Expect = 4e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -2
Query: 263 LVGQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNE 156
L+ +IQ YL+ HYQIEHATIQMEYQ C C ++
Sbjct: 263 LLRRIQEYLLKHYQIEHATIQMEYQRCDDDHCSFHQ 298
>UniRef50_A4M8G9 Cluster: ATPase AAA-2 domain protein; n=2;
Petrotoga mobilis SJ95|Rep: ATPase AAA-2 domain protein
- Petrotoga mobilis SJ95
Length = 830
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET+ I +G+K KY HH V+Y YI DRHLPDKAIDVIDEAGA+AR
Sbjct: 356 IEETINILSGIKFKYEEHHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKAR 415
Query: 688 L----MPVSKRKKTVNVADIES 741
L +P + + +ADIES
Sbjct: 416 LSALTLPDKLKIQYEKIADIES 437
Score = 49.6 bits (113), Expect = 9e-05
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+G+I VIGSTT E+ EKD AL RRFQKI +TEP+
Sbjct: 318 NGEITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPT 355
>UniRef50_A6DEF7 Cluster: ENDOPEPTIDASE CLP ATP-BINDING CHAIN A;
n=1; Caminibacter mediatlanticus TB-2|Rep: ENDOPEPTIDASE
CLP ATP-BINDING CHAIN A - Caminibacter mediatlanticus
TB-2
Length = 730
Score = 73.7 bits (173), Expect = 5e-12
Identities = 37/88 (42%), Positives = 54/88 (61%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+T++I GLKPKY H+VRY+ Y+ ++ LPD AID+IDEAGA+ +
Sbjct: 338 IEDTIKILEGLKPKYEEFHNVRYSKEAIKSAAILAKKYLREKFLPDSAIDLIDEAGAKYK 397
Query: 688 LMPVSKRKKTVNVADIESVVARIARFQR 771
L + KK + +DIES+VA IA +
Sbjct: 398 L----RGKKLITKSDIESIVANIANIPK 421
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+IR IG+TTY+E+ N FEKD+AL RRFQKIDI EPS + K
Sbjct: 301 GEIRCIGATTYEEYKNHFEKDKALNRRFQKIDIKEPSIEDTIK 343
>UniRef50_Q5PAJ8 Cluster: ATP-dependent clp protease ATP-binding
subunit; n=16; Alphaproteobacteria|Rep: ATP-dependent
clp protease ATP-binding subunit - Anaplasma marginale
(strain St. Maries)
Length = 781
Score = 72.9 bits (171), Expect = 8e-12
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 502 TVVEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
+ VEET+QI +G+K Y +HDV YT YI +R LPDKA+DV+DEAG
Sbjct: 374 STVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAGVY 433
Query: 682 ARLMPVSKRKKTVNVADIESVVARI 756
A+L + K V DIES+++RI
Sbjct: 434 AKLRS-GENGKVVTGRDIESIISRI 457
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 502
G IR IG+TTY+E+++ FEKDRALARR+QKI++ E
Sbjct: 339 GSIRCIGATTYKEYNSNFEKDRALARRYQKINVEE 373
>UniRef50_A4E9C6 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 880
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/61 (57%), Positives = 40/61 (65%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+TV+I LKP+Y HH VRYT YI DR LPDKAID+IDEAGARAR
Sbjct: 368 VEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLIDEAGARAR 427
Query: 688 L 690
+
Sbjct: 428 I 428
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G ++IG+TT +EF KD A RRFQ ID+ EPS + K
Sbjct: 331 GAFQIIGATTAEEFRKYLTKDPAFERRFQTIDVEEPSVEDTVK 373
>UniRef50_Q8KFX9 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpC; n=40; cellular organisms|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpC -
Chlorobium tepidum
Length = 854
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +1
Query: 502 TVVEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
T VEET+QI N +K KY AHH V Y+ YI DR LPDKAIDV+DEAGAR
Sbjct: 364 TSVEETIQILNNIKNKYEAHHHVHYSEDAIEKAVKLSERYITDRFLPDKAIDVMDEAGAR 423
Query: 682 ARL 690
L
Sbjct: 424 VHL 426
Score = 41.1 bits (92), Expect = 0.030
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
G+++ IG+TT E+ EKD AL RRFQKI + EP+S
Sbjct: 329 GELQCIGATTLDEYRQYIEKDGALDRRFQKI-MVEPTS 365
>UniRef50_A4FPZ1 Cluster: Clp protease ATP binding subunit; n=2;
Actinomycetales|Rep: Clp protease ATP binding subunit -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 828
Score = 70.1 bits (164), Expect = 6e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VEETVQI GL+ Y AHH VR+T Y++DR LPDKAID++D+ GAR R
Sbjct: 375 VEETVQILEGLRDSYEAHHGVRFTDEALTAAAVLSDRYVSDRFLPDKAIDLVDQTGARVR 434
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
L S R+ T V + + +A++ R
Sbjct: 435 LR--SMRRST-GVRERQDELAKLRR 456
Score = 41.1 bits (92), Expect = 0.030
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ VIG+TT E+ E D AL RRFQ + I EPS
Sbjct: 338 GELHVIGATTVDEYRRYVETDGALERRFQPVMIPEPS 374
>UniRef50_A6KY28 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Bacteroides vulgatus ATCC 8482|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpA -
Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
11154)
Length = 742
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET+ I GLK +Y H V Y YI+DR LPDKAID++DEAGA
Sbjct: 345 IEETIHIVEGLKERYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYRE 404
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
+ P +TV+ A I ++ARI +
Sbjct: 405 IHPTDTETQTVDKALITDILARICK 429
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G+IR IGSTTY+EF+ F + R L RRFQ+IDI EP
Sbjct: 308 GEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEP 343
>UniRef50_Q97I30 Cluster: ATP-dependent Clp proteinase; n=5;
Bacteria|Rep: ATP-dependent Clp proteinase - Clostridium
acetobutylicum
Length = 750
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+ ET I G+K +Y H+V YT INDR LPDKAIDVIDE GA A
Sbjct: 353 INETYDILMGIKTRYEQFHNVHYTNASLKAAAALSAKCINDRFLPDKAIDVIDECGAFAE 412
Query: 688 LMPVSKRKKTVNVADIESVVARIA 759
+ K +NV D+E+V++ I+
Sbjct: 413 MNRKDTEKVYINVKDVENVISSIS 436
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFKSTM 535
GKI+ IGSTTY E+ IF+KDRAL+RRFQKID+ EP+ + + M
Sbjct: 316 GKIKFIGSTTYDEYKKIFDKDRALSRRFQKIDVGEPTINETYDILM 361
>UniRef50_P42762 Cluster: ERD1 protein, chloroplast precursor; n=9;
Magnoliophyta|Rep: ERD1 protein, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 945
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ V+I GL+ KY AHH+ +YT YI DR LPDKAID+IDEAG+RAR+
Sbjct: 458 EDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARI 517
Query: 691 MPVSKRKK 714
K+K+
Sbjct: 518 EAFRKKKE 525
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+++ I STT EF + FEKD+ALARRFQ + I EPS + K
Sbjct: 420 GELQCIASTTLDEFRSQFEKDKALARRFQPVLINEPSEEDAVK 462
>UniRef50_O83779 Cluster: ATP-dependent Clp protease subunit A; n=1;
Treponema pallidum|Rep: ATP-dependent Clp protease
subunit A - Treponema pallidum
Length = 809
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
K L SGKIR IGSTTY+E++ F KD+ALARRFQKIDI EPS ++ +
Sbjct: 349 KPLLSSGKIRCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLR 397
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
EET++I G++ Y H V Y+ YI RHLPDKAID+IDEAGA A+L
Sbjct: 393 EETLRILEGIRTLYEDFHAVHYSDEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKL 452
Query: 691 MPVSKRKK----TVNVADIESVVARIARFQRR 774
+ + +DI+ +VA+IA+ ++
Sbjct: 453 SRGKHGTEGVCSVIGESDIDEIVAKIAKIPKQ 484
>UniRef50_Q8EU05 Cluster: Chaperone protein clpB; n=6; Bacilli|Rep:
Chaperone protein clpB - Oceanobacillus iheyensis
Length = 809
Score = 66.1 bits (154), Expect = 9e-10
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET+QI NGL+ +Y AHH V T YI DR LPDKAID+IDEAG++ R
Sbjct: 347 LEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYITDRFLPDKAIDLIDEAGSKVR 406
Query: 688 L 690
L
Sbjct: 407 L 407
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ I + EP+
Sbjct: 310 GELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPT 346
>UniRef50_P31541 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpA homolog CD4A, chloroplast precursor; n=174;
cellular organisms|Rep: ATP-dependent Clp protease
ATP-binding subunit clpA homolog CD4A, chloroplast
precursor - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum)
Length = 926
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ET+QI GL+ +Y HH + YT YI+DR LPDKAID+IDEAG+R R
Sbjct: 438 VDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVR 497
Query: 688 L 690
L
Sbjct: 498 L 498
Score = 41.9 bits (94), Expect = 0.017
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ + + EPS
Sbjct: 401 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPS 437
>UniRef50_Q8NMA0 Cluster: ATPases with chaperone activity,
ATP-binding subunit; n=11; Bacteria|Rep: ATPases with
chaperone activity, ATP-binding subunit -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 925
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ TV+I GL+ +Y AHH V T YINDR LPDKA+D+IDEAGAR R
Sbjct: 371 VDLTVEILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARMR 430
Query: 688 L----MPVSKRKKTVNVADI 735
+ P S R+ +AD+
Sbjct: 431 IKRMTAPSSLREVDERIADV 450
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ + + EPS
Sbjct: 334 GELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPS 370
>UniRef50_Q7XL03 Cluster: OJ000315_02.14 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: OJ000315_02.14 protein -
Oryza sativa subsp. japonica (Rice)
Length = 877
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ V+I GL+ KY +H +YT YI DRHLPDKAID+IDEAG+RAR
Sbjct: 465 EDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAGSRAR- 523
Query: 691 MPVSKRKK 714
M KRKK
Sbjct: 524 MESFKRKK 531
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+++ I STT E F+KD+ALARRFQ + + EPS + K
Sbjct: 427 GELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVK 469
>UniRef50_A2XT33 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 1002
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ V+I GL+ KY +H +YT YI DRHLPDKAID+IDEAG+RAR
Sbjct: 486 EDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAGSRAR- 544
Query: 691 MPVSKRKK 714
M KRKK
Sbjct: 545 MESFKRKK 552
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 401 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
KI+ I STT E F+KD+ALARRFQ + + EPS + K
Sbjct: 449 KIKCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVK 490
>UniRef50_A6G683 Cluster: Probable ATP-dependent Clp protease; n=1;
Plesiocystis pacifica SIR-1|Rep: Probable ATP-dependent
Clp protease - Plesiocystis pacifica SIR-1
Length = 767
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+E + I GLKP Y AHH+V YT Y+ DR LPD AIDV+DE GA ARL
Sbjct: 274 DEAILILQGLKPAYEAHHNVSYTPDAIEESVRLAHKYLRDRRLPDSAIDVMDETGAAARL 333
Query: 691 MPVSKRK 711
K K
Sbjct: 334 GDYGKAK 340
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/39 (58%), Positives = 34/39 (87%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
+G++R IG+TTY+E+ N F++D ALARRFQKI+I EP++
Sbjct: 236 AGRVRCIGATTYKEYKN-FDRDPALARRFQKIEIVEPTT 273
>UniRef50_Q9PKA8 Cluster: Probable ATP-dependent Clp protease
ATP-binding subunit; n=10; Chlamydiae/Verrucomicrobia
group|Rep: Probable ATP-dependent Clp protease
ATP-binding subunit - Chlamydia muridarum
Length = 870
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ETV+I GLK KY HH+V T Y++ R LPDKAID++DEAGAR R
Sbjct: 387 VDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVR 446
Query: 688 LMPVSKRKKTVNV-ADIES 741
+ + + + + + A+IES
Sbjct: 447 VNTMGQPSELLRLEAEIES 465
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I+ IG+TT E+ EKD AL RRFQKI + PS
Sbjct: 350 GEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPS 386
>UniRef50_A0K1M3 Cluster: ATPase AAA-2 domain protein; n=6;
Actinomycetales|Rep: ATPase AAA-2 domain protein -
Arthrobacter sp. (strain FB24)
Length = 857
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/61 (49%), Positives = 38/61 (62%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+ VQI +GL+ +Y HH VRYT Y+ DR LPDKAID++D+AGAR
Sbjct: 387 VEDAVQILSGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLS 446
Query: 688 L 690
L
Sbjct: 447 L 447
Score = 39.9 bits (89), Expect = 0.069
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ V+G+TT+ E+ + EKD A RRFQ + + EP+
Sbjct: 351 GELHVVGATTFNEYRKV-EKDPAFERRFQPVQVGEPA 386
>UniRef50_Q7VBI5 Cluster: ATPase with chaperone activity ATP-binding
subunit; n=19; cellular organisms|Rep: ATPase with
chaperone activity ATP-binding subunit - Prochlorococcus
marinus
Length = 856
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+T++I GL+ +Y HH ++ T YI+DR LPDKAID+IDEAG+R R
Sbjct: 345 IEDTIEILKGLRERYEQHHRLKITDEALNAAANLGDRYISDRFLPDKAIDLIDEAGSRVR 404
Query: 688 LM 693
L+
Sbjct: 405 LL 406
Score = 40.3 bits (90), Expect = 0.052
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ E+D AL RRFQ + I EPS
Sbjct: 308 GELQCIGATTLDEYRKHIERDAALERRFQPVMIGEPS 344
>UniRef50_A1STR4 Cluster: Chaperone endopeptidase Clp ATP-binding
chain B,ClpB; n=2; Alteromonadales|Rep: Chaperone
endopeptidase Clp ATP-binding chain B,ClpB -
Psychromonas ingrahamii (strain 37)
Length = 828
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/61 (47%), Positives = 35/61 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET+ I G P+Y HHD+ Y YI DR LPDKA+D+IDEAGAR
Sbjct: 361 IEETIAILQGAAPRYEKHHDIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKH 420
Query: 688 L 690
L
Sbjct: 421 L 421
Score = 40.3 bits (90), Expect = 0.052
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
KT G ++VIG+ T E+ E D+AL RRF I + EPS
Sbjct: 318 KTALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPS 360
>UniRef50_P37571 Cluster: Negative regulator of genetic competence
clpC/mecB; n=31; Bacteria|Rep: Negative regulator of
genetic competence clpC/mecB - Bacillus subtilis
Length = 810
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+E++QI GL+ +Y AHH V T YI+DR LPDKAID+IDEAG++ R
Sbjct: 344 VDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVR 403
Query: 688 L 690
L
Sbjct: 404 L 404
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ I + +PS
Sbjct: 307 GELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPS 343
>UniRef50_Q7V2A3 Cluster: Chaperone protein clpB; n=6; Bacteria|Rep:
Chaperone protein clpB - Prochlorococcus marinus subsp.
pastoris (strain CCMP 1378 / MED4)
Length = 860
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V++T+ I GL+ KY HH VR + YINDR LPDKAID+IDEA +R
Sbjct: 341 VDDTISILRGLREKYEVHHSVRISDNALVAAASLSERYINDRFLPDKAIDLIDEAASRLN 400
Query: 688 LMPVSK 705
++ SK
Sbjct: 401 MIITSK 406
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E EKD AL RRFQKI I PS
Sbjct: 298 KPMLARGELRCIGATTINEHKQNIEKDPALERRFQKIKINAPS 340
>UniRef50_Q0P9E6 Cluster: ATP-dependent Clp protease ATP-binding
subunit; n=11; Campylobacter|Rep: ATP-dependent Clp
protease ATP-binding subunit - Campylobacter jejuni
Length = 709
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
EE++QI GLK KY H ++ + ND+ LPD AID+IDE GA L
Sbjct: 324 EESLQILKGLKNKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDSAIDLIDELGASFAL 383
Query: 691 MPVSKRKKTVNVADIESVVARIARFQR 771
P + KK N+ D+E+V+A++ +
Sbjct: 384 NP--RAKKNANLKDLENVLAKMTHHHK 408
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/41 (43%), Positives = 32/41 (78%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
+G ++ IG+TT+ E+ N F+K++ L+RRF KI++ EPS ++
Sbjct: 285 NGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEE 325
>UniRef50_Q4UAC3 Cluster: ClpB protein, putative; n=1; Theileria
annulata|Rep: ClpB protein, putative - Theileria
annulata
Length = 1150
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET+ I GLK +Y HH VR YI DR+LPDKAID+IDEA A+ +
Sbjct: 489 IEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKAIDLIDEAAAKLK 548
Query: 688 LMPVSK 705
+ SK
Sbjct: 549 IQLSSK 554
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT QE+ EKD+AL RRFQ I I EP+
Sbjct: 446 KPMLARGELRCIGATTLQEYRQKIEKDKALERRFQPIYIDEPN 488
>UniRef50_P74459 Cluster: Chaperone protein clpB 1; n=43; cellular
organisms|Rep: Chaperone protein clpB 1 - Synechocystis
sp. (strain PCC 6803)
Length = 898
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V++T+ I GLK KY HH V+ T YI DR LPDKAID++DEA AR +
Sbjct: 347 VDDTISILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLK 406
Query: 688 LMPVSK 705
+ SK
Sbjct: 407 MEITSK 412
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E+ EKD AL RRFQ++ + +PS
Sbjct: 304 KPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPS 346
>UniRef50_Q53N47 Cluster: ATPase, AAA family, putative; n=2; Oryza
sativa (japonica cultivar-group)|Rep: ATPase, AAA
family, putative - Oryza sativa subsp. japonica (Rice)
Length = 918
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 502 TVVEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
+ V+ETV I GL+ +Y HH V+YT +I DR LPDKAID++DEAG+
Sbjct: 445 STVDETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSI 504
Query: 682 ARLMPVS-KRKKTVNVADIE 738
RL K K VN + E
Sbjct: 505 VRLRNAQCKPSKKVNDLEAE 524
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 502
G+++ IG+TT E+ EKD AL RRFQ + I E
Sbjct: 410 GELQCIGATTINEYRKHIEKDAALERRFQPVKIPE 444
>UniRef50_Q8DG71 Cluster: Chaperone protein clpB 2; n=366; cellular
organisms|Rep: Chaperone protein clpB 2 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 887
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GLK +Y HH+V+ T YI+DR+LPDKAID++DEA A+ +
Sbjct: 345 VEDTISILRGLKDRYEIHHNVKITDSALVAAAMLSDRYISDRYLPDKAIDLVDEAAAKLK 404
Query: 688 LMPVSK 705
+ +K
Sbjct: 405 MEITTK 410
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E+ EKD AL RRFQ++ I +PS
Sbjct: 302 KPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIGQPS 344
>UniRef50_A7HJU2 Cluster: ATPase AAA-2 domain protein; n=2;
Thermotogaceae|Rep: ATPase AAA-2 domain protein -
Fervidobacterium nodosum Rt17-B1
Length = 741
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+EET++I GLK K+ H+V + YI DR LPDKA+D++DEA ARA+
Sbjct: 346 IEETIEILKGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAK 405
Query: 688 LMPVSKRKKTVNVADIESVVAR 753
+ KK + DI SV+ R
Sbjct: 406 I----DGKKEIVEEDIASVIER 423
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G +RVIG+TT +E+ EKD+ALARRFQ I + EPS
Sbjct: 309 GTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPS 345
>UniRef50_O78410 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpA homolog; n=34; cellular organisms|Rep:
ATP-dependent Clp protease ATP-binding subunit clpA
homolog - Guillardia theta (Cryptomonas phi)
Length = 819
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VEET++I GL+ +Y HH + + YI DR LPDKAID+IDEAG+R R
Sbjct: 343 VEETIEILYGLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVR 402
Query: 688 LM 693
LM
Sbjct: 403 LM 404
Score = 41.5 bits (93), Expect = 0.023
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT +E+ EKD AL RRFQ + + EPS
Sbjct: 306 GEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPS 342
>UniRef50_Q7NKD6 Cluster: Endopeptidase Clp ATP-binding chain; n=3;
Cyanobacteria|Rep: Endopeptidase Clp ATP-binding chain -
Gloeobacter violaceus
Length = 778
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+E + I GLK +Y HH +RYT YI DR LPDKAID+IDEAG+ R
Sbjct: 353 VDEAIAILQGLKVRYEEHHKLRYTDAALEAAVRLSDRYIADRFLPDKAIDLIDEAGSMIR 412
Query: 688 LMPVSKRKKTVNVADIESV 744
+ +++ + + D E++
Sbjct: 413 -VKLARGAELPAIVDSEAI 430
Score = 40.7 bits (91), Expect = 0.039
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ E+D AL RRFQ + + EPS
Sbjct: 316 GELQCIGATTLDEYRKHIERDAALERRFQPVTVGEPS 352
>UniRef50_Q7VFW1 Cluster: ATP-dependent CLP protease ClpB; n=4;
Epsilonproteobacteria|Rep: ATP-dependent CLP protease
ClpB - Helicobacter hepaticus
Length = 758
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+ +I GL P Y ++H ++YT Y++D+ LPDKAID++DE GA R
Sbjct: 343 LEDCYKIIEGLAPIYESYHHIKYTKNALKACVDLSARYVSDKFLPDKAIDLLDEVGANMR 402
Query: 688 LMPVS-KRKKTVNVADIESVVAR 753
+ T+ + DIES++++
Sbjct: 403 IYHNKIDSTPTITIKDIESILSK 425
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
+G +R IG+TT+ EF F+KD+AL RRF KI++ EPS + +K
Sbjct: 305 NGSLRCIGATTFAEFKTHFDKDKALLRRFSKIEVKEPSLEDCYK 348
>UniRef50_Q73KU3 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Treponema denticola|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpA -
Treponema denticola
Length = 785
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
K + +GK+R IG+TT++E++ F KD ALARRFQKIDI EP+ ++ K
Sbjct: 329 KPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKIDIEEPNEEEAVK 377
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
EE V+I GL+ Y H V Y+ +I DR LPDKAID+IDEAGA ++
Sbjct: 373 EEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDEAGALIKI 432
Query: 691 MPVSKRKKTVNVAD 732
+ ++K N AD
Sbjct: 433 R--ADKEKNENEAD 444
>UniRef50_A7HFK9 Cluster: ATPase AAA-2 domain protein; n=42;
Bacteria|Rep: ATPase AAA-2 domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 935
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+TVQI GL+ ++ AHH V + YI++R LPDKAID+ID+A AR R
Sbjct: 435 VEQTVQILRGLRDRFEAHHKVTISDEAITAAAELSDRYISNRFLPDKAIDLIDQAAARVR 494
Query: 688 LMPVSK 705
L S+
Sbjct: 495 LRLTSR 500
Score = 41.1 bits (92), Expect = 0.030
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ +IG+TT E+ EKD AL RRFQ + + EP+
Sbjct: 398 GELHLIGATTLNEYQKHIEKDAALERRFQPVIVPEPT 434
>UniRef50_Q4FYX5 Cluster: Serine peptidase, putative; n=7;
Trypanosomatidae|Rep: Serine peptidase, putative -
Leishmania major
Length = 817
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VEET+ I G+K KY AHH Y+++R LPDKAID+IDEA +R R
Sbjct: 285 VEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAASRLR 344
Query: 688 LMPVSK 705
L SK
Sbjct: 345 LQQESK 350
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ IG+TT E+ EKD ALARRFQ + +TEP+
Sbjct: 248 GELHCIGATTLDEYRQHIEKDAALARRFQSVLVTEPT 284
>UniRef50_Q8KA87 Cluster: Probable chaperone protein clpB 2; n=15;
cellular organisms|Rep: Probable chaperone protein clpB
2 - Chlorobium tepidum
Length = 442
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/61 (52%), Positives = 35/61 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+TV I GLK KY HH VR YI DR LPDKAID+IDEA +R R
Sbjct: 346 VEDTVSILRGLKEKYEIHHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLR 405
Query: 688 L 690
L
Sbjct: 406 L 406
Score = 41.9 bits (94), Expect = 0.017
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R IG+TT E+ EKD AL RRFQ + + +PS
Sbjct: 309 GELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPS 345
>UniRef50_A5WFU1 Cluster: ATP-dependent Clp protease, ATP-binding
subunit clpA; n=3; Psychrobacter|Rep: ATP-dependent Clp
protease, ATP-binding subunit clpA - Psychrobacter sp.
PRwf-1
Length = 854
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+G++R IGSTT+ E+ +FEKD AL+RRFQKID+ EPS
Sbjct: 313 NGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPS 350
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+++++I GLK +Y H+V+YT +I++R LPDKAIDVIDEAGA R
Sbjct: 351 VDDSIEILRGLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKR 410
Query: 688 L 690
L
Sbjct: 411 L 411
>UniRef50_P33416 Cluster: Heat shock protein 78, mitochondrial
precursor; n=48; cellular organisms|Rep: Heat shock
protein 78, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 811
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +T+ I GLK +Y HH VR T YI DR LPDKAID++DEA A R
Sbjct: 278 VSDTISILRGLKERYEVHHGVRITDTALVSAAVLSNRYITDRFLPDKAIDLVDEACAVLR 337
Query: 688 LMPVSK 705
L SK
Sbjct: 338 LQHESK 343
Score = 38.3 bits (85), Expect = 0.21
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +2
Query: 404 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+R I +TT EF I EKD AL+RRFQ I + EPS
Sbjct: 244 LRCISATTLDEFK-IIEKDPALSRRFQPILLNEPS 277
>UniRef50_Q7VBL0 Cluster: Chaperone protein clpB; n=9; Bacteria|Rep:
Chaperone protein clpB - Prochlorococcus marinus
Length = 864
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+T+ I GLK KY HH VR + YI++R+LPDKAID+IDE+ ++ +
Sbjct: 344 IEDTISILRGLKEKYEVHHGVRISDSALVAAAVLSNRYISERYLPDKAIDLIDESASKLK 403
Query: 688 LMPVSK 705
+ SK
Sbjct: 404 MEITSK 409
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E EKD AL RRFQ++ I+EPS
Sbjct: 301 KPMLARGELRCIGATTINEHRQHIEKDPALERRFQQVLISEPS 343
>UniRef50_Q4U8P5 Cluster: Endopeptidase (CLP homologue) ATP-binding
chain, putative; n=2; Theileria|Rep: Endopeptidase (CLP
homologue) ATP-binding chain, putative - Theileria
annulata
Length = 916
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+T++I NG+ Y H V YT YINDR LPDKAID++DE+G+ A++
Sbjct: 445 EDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRFLPDKAIDIMDESGSFAKI 504
Query: 691 MPVSKRKKTVN 723
++ K+ N
Sbjct: 505 QYQNELKREKN 515
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+I+ I TT +E+ FEKD AL+RRF I + EPS + K
Sbjct: 407 GEIQCIAITTPKEYKKYFEKDMALSRRFHPIYVDEPSEEDTLK 449
>UniRef50_Q88XZ5 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpC; n=32; Bacilli|Rep: ATP-dependent Clp
protease, ATP-binding subunit ClpC - Lactobacillus
plantarum
Length = 837
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+E V+I +GL+P+Y HH V T YI+DR LPDKAID++DEA A+ R+
Sbjct: 354 DEAVEILDGLRPRYEEHHRVTITDEAVDQAVKLSSRYISDRFLPDKAIDLMDEAAAKVRI 413
Score = 37.9 bits (84), Expect = 0.28
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ E D AL RRF + + EP+
Sbjct: 316 GELQTIGATTLNEYQKYIESDAALERRFATVMVNEPT 352
>UniRef50_Q8F509 Cluster: Chaperone protein clpB; n=26;
Bacteria|Rep: Chaperone protein clpB - Leptospira
interrogans
Length = 860
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VEETV I GLK +Y HH +R YI+DR LPDKA+D+IDEA ++ R
Sbjct: 345 VEETVTILRGLKGRYELHHGIRILDSALIAAATLSNRYISDRFLPDKAVDLIDEASSKMR 404
Query: 688 L 690
+
Sbjct: 405 I 405
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT +E+ EKD AL RRFQ + + EPS
Sbjct: 302 KPMLARGELRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPS 344
>UniRef50_P35594 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpE; n=86; Bacilli|Rep: ATP-dependent Clp
protease ATP-binding subunit clpE - Streptococcus
pneumoniae
Length = 752
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ET+ I G++ KY +H V+YT YI DR LPDKAID++DEAG++
Sbjct: 294 VDETITILKGIQKKYEDYHHVQYTDAAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMN 353
Query: 688 L 690
L
Sbjct: 354 L 354
Score = 37.9 bits (84), Expect = 0.28
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++++G+TT E+ I EKD AL RR Q + + EP+
Sbjct: 258 GELQLVGATTLNEY-RIIEKDAALERRMQPVKVDEPT 293
>UniRef50_Q4L3I4 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpC; n=38; cellular organisms|Rep:
ATP-dependent Clp protease ATP-binding subunit clpC -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 824
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ +Y AHH + + Y++DR LPDKAID+IDEA ++ R
Sbjct: 344 VEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVR 403
Query: 688 LMPVSKRKKTVNVADIESVVARI 756
L N+ +IE + ++
Sbjct: 404 L---KSHTTPNNLKEIEQEIEKV 423
Score = 41.9 bits (94), Expect = 0.017
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ I + EP+
Sbjct: 307 GELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPT 343
>UniRef50_Q7VJY3 Cluster: Chaperone protein clpB; n=52;
Bacteria|Rep: Chaperone protein clpB - Helicobacter
hepaticus
Length = 859
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+ E +QI G+KP AHH+V T YI DR LPDKAID+IDEA A +
Sbjct: 342 INEALQILRGIKPNLEAHHNVNITDAALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELK 401
Query: 688 LM----PVSKRKKTVNVADIE 738
+ P+ K ++A++E
Sbjct: 402 MQIESEPLELSKIKKHIANLE 422
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ IG+TT +E+ FEKD AL RRFQ I++ EPS
Sbjct: 305 GELHTIGATTLKEYRKYFEKDAALTRRFQPINVNEPS 341
>UniRef50_A6QBZ7 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Sulfurovum sp. NBC37-1|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpA -
Sulfurovum sp. (strain NBC37-1)
Length = 729
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T I G++ KY HH++++T Y++DR LPDKA+D+IDE G A
Sbjct: 339 VEDTFTILKGVQHKYEDHHNIKFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVG--AH 396
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
M V DIE VA++ +
Sbjct: 397 FMLKGAEGVIVKPKDIEESVAKMMK 421
Score = 56.0 bits (129), Expect = 1e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLF 523
G ++ IG+TTY E+ N F+KD+AL+RRF KID+ EPS + F
Sbjct: 302 GDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTF 343
>UniRef50_Q01H11 Cluster: CLPB1_SYNEL Chaperone clpB 1
dbj|BAC08941.1| ClpB protein; n=2; Ostreococcus|Rep:
CLPB1_SYNEL Chaperone clpB 1 dbj|BAC08941.1| ClpB
protein - Ostreococcus tauri
Length = 826
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V++TV I GL+P+Y HH + + Y++ R LPDKAID++DEA A R
Sbjct: 240 VDDTVSILRGLRPRYEQHHSIAISEGALLASAQLSARYVSGRQLPDKAIDLLDEAAAAVR 299
Query: 688 LMPVSK 705
+ SK
Sbjct: 300 MSKTSK 305
Score = 39.1 bits (87), Expect = 0.12
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G +R +G+T+ +F E+D AL RRFQ + + EPS
Sbjct: 203 GLLRCVGATSADKFKKTIEQDAALERRFQVVTVEEPS 239
>UniRef50_P42730 Cluster: Heat shock protein 101; n=112; cellular
organisms|Rep: Heat shock protein 101 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 911
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +T+ I GLK KY HH VR YI RHLPDKAID++DEA A R
Sbjct: 344 VPDTISILRGLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVR 403
Query: 688 LMPVSKRKKTVNV 726
+ S+ ++ N+
Sbjct: 404 VQLDSQPEEIDNL 416
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT +E+ EKD A RRFQ++ + EPS
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPS 343
>UniRef50_Q7VDY2 Cluster: ATPases with chaperone activity,
ATP-binding subunit; n=14; Cyanobacteria|Rep: ATPases
with chaperone activity, ATP-binding subunit -
Prochlorococcus marinus
Length = 924
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
++ +V+I G+K +Y HH+V+ + YI+DR LPDKAID+IDEA A+ +
Sbjct: 395 IDLSVEILRGIKERYETHHEVKISDEALITANRLADRYISDRCLPDKAIDLIDEAAAQIK 454
Query: 688 LMPVSKRK 711
+ SK K
Sbjct: 455 MESTSKPK 462
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + +G+IR IG+TT + EKD+AL RRFQK+ I EPS
Sbjct: 352 KPVLANGEIRCIGATTPDNYRRTIEKDQALNRRFQKVLIKEPS 394
>UniRef50_Q5FHW6 Cluster: ATP-dependent protease; n=4;
Lactobacillus|Rep: ATP-dependent protease -
Lactobacillus acidophilus
Length = 709
Score = 56.8 bits (131), Expect = 6e-07
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 520 VQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLM-- 693
++I GLK KY +H V+YT YI R+LPDKAID++DEAGA+ L+
Sbjct: 249 IKILEGLKKKYEDYHHVKYTDDSLKLAVELSERYIQGRYLPDKAIDLMDEAGAKKALLVQ 308
Query: 694 PVSKRKKTVNVADIESVVARIAR 762
P ++ ++ +E+ A A+
Sbjct: 309 PTDEKSLKNQISALEAKKAEAAK 331
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
SG++++IG+TT EF I EKD AL+RRFQ + + EPS+ K
Sbjct: 208 SGELKLIGATTTSEFQRI-EKDPALSRRFQAVQVPEPSTDVAIK 250
>UniRef50_A7HAC7 Cluster: ATPase AAA-2 domain protein; n=4;
Cystobacterineae|Rep: ATPase AAA-2 domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 840
Score = 56.8 bits (131), Expect = 6e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +TV I GL P+Y HH VR+ Y+ DR LPDKA+ +D AG+RA
Sbjct: 435 VADTVTILRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALDLAGSRAS 494
Query: 688 LMPVSKRKKTVNVADIESVVARIA 759
++ V+ AD+ VA++A
Sbjct: 495 RAGAAE----VDAADVARTVAKMA 514
Score = 37.5 bits (83), Expect = 0.37
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+ IG+TT+ E+ EKD AL RRF + + EPS
Sbjct: 398 GEFPCIGATTHDEYRQHIEKDPALERRFTPVLVREPS 434
>UniRef50_Q7MXY4 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpC; n=6; Bacteroidetes|Rep: ATP-dependent Clp
protease, ATP-binding subunit ClpC - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 859
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 502 TVVEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
+ EET+ I +K KY +H VRYT Y++DR PDKAID +DEAGA
Sbjct: 392 STAEETLTILQNIKEKYEDYHGVRYTDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGAS 451
Query: 682 ARLMPVSKRKK-TVNVADIESV 744
+ V K+ + A++ SV
Sbjct: 452 VHITNVVAPKEIEILEAELASV 473
Score = 39.9 bits (89), Expect = 0.069
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+++ IG+TT E+ EKD AL RRFQK+ I ++++
Sbjct: 357 GQVQCIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEE 396
>UniRef50_A1A3G2 Cluster: Chaperone clpB; n=2; Bifidobacterium
adolescentis|Rep: Chaperone clpB - Bifidobacterium
adolescentis (strain ATCC 15703 / DSM 20083)
Length = 905
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+TV I G+ PKY AHH V YI+ R LPDKAID++DEA A R
Sbjct: 345 VEDTVAILRGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLR 404
Query: 688 L 690
+
Sbjct: 405 M 405
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R+IG+TT E+ EKD AL RRFQ++ + EPS
Sbjct: 302 KPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPS 344
>UniRef50_A7H7Z7 Cluster: ATPase AAA-2 domain protein; n=11;
Bacteria|Rep: ATPase AAA-2 domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 890
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ ++I GL+ Y AHH V+ T Y+ DR LPDKAID++DEA A RL
Sbjct: 407 EQALEILRGLRDAYEAHHRVKITDAALTAAVDLSDRYVTDRFLPDKAIDLMDEAAAMVRL 466
Query: 691 MPVSKRKKTVNVADIESVVAR 753
S + +A++E VA+
Sbjct: 467 SAASGPDR---LAELEGRVAQ 484
Score = 41.5 bits (93), Expect = 0.023
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+++ +G+TT E+ EKD AL RRFQ + ++EP++++
Sbjct: 369 GELQALGATTLDEYRKHIEKDAALERRFQPVLVSEPTAEQ 408
>UniRef50_Q73L29 Cluster: ATPase, AAA family; n=2; Treponema|Rep:
ATPase, AAA family - Treponema denticola
Length = 832
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/74 (40%), Positives = 37/74 (50%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
EET I G+K KY HH+V Y YI DR PDKAIDV+DEAGA +
Sbjct: 348 EETFDILCGIKHKYEEHHNVIYEPQTVTKIIEYSKRYITDRFFPDKAIDVLDEAGAMKKT 407
Query: 691 MPVSKRKKTVNVAD 732
+ K + + D
Sbjct: 408 ILDKKPGELFEIED 421
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLF 523
G+I+ IG+TT E+ F+ D AL RRFQ I + EP+ ++ F
Sbjct: 310 GEIQCIGATTVDEYRRYFKNDLALERRFQLIQVKEPNPEETF 351
>UniRef50_A5Z672 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 831
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLM 693
+T++I +GLK Y H V + YINDR+LPDKAID+IDEA ++ R+
Sbjct: 368 QTIEILHGLKSAYEEFHKVNISDEAVEAAVKLSTRYINDRNLPDKAIDLIDEACSKVRIK 427
Query: 694 PVSKRKKTVN 723
K K N
Sbjct: 428 EKPKPKSVTN 437
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++VIG+TT E+ FEKD AL RRFQ + + EP+
Sbjct: 329 GRLQVIGATTIAEYRKYFEKDAALERRFQPVTVEEPT 365
>UniRef50_O77222 Cluster: Heat shock protein hsp104; n=5; cellular
organisms|Rep: Heat shock protein hsp104 - Plasmodium
falciparum
Length = 752
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ET+ I GLK +Y HH VR YI+ R LPDKAID+IDEA + +
Sbjct: 353 VDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLK 412
Query: 688 LMPVSKRKKTVNV 726
+ SK + N+
Sbjct: 413 IQLSSKPIQLENI 425
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E+ EKD+AL RRFQ+I + +PS
Sbjct: 310 KPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPS 352
>UniRef50_A3AJA8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 715
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ +Y HH VR + YI+ R LPDKAID++DE+ A+ +
Sbjct: 407 VEDTISILRGLRERYELHHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLK 466
Query: 688 LMPVSK 705
+ SK
Sbjct: 467 MEITSK 472
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R IG+TT E+ EKD AL RRFQ++ + +PS
Sbjct: 370 GELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPS 406
>UniRef50_Q96TW3 Cluster: HSP100 protein; n=1; Phycomyces
blakesleeanus|Rep: HSP100 protein - Phycomyces
blakesleeanus
Length = 901
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V T+ I GLK +Y ++H V+ T YI R LPDKAID+IDEAGA R
Sbjct: 342 VAATISILRGLKERYESYHGVKITDSALVVAAQLSDRYITTRFLPDKAIDLIDEAGANTR 401
Query: 688 LMPVSK 705
+ SK
Sbjct: 402 VQLDSK 407
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT E+ + EKD A RRFQK+D+ EPS
Sbjct: 300 KPMLARGELRCIGATTLTEYK-VIEKDPAFERRFQKVDVGEPS 341
>UniRef50_O83110 Cluster: Chaperone protein clpB; n=21; cellular
organisms|Rep: Chaperone protein clpB - Treponema
pallidum
Length = 878
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ KY HH VR YI +R LPDKAID++DEA +R +
Sbjct: 343 VEDTIAILRGLQEKYEVHHGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASRLK 402
Query: 688 L 690
+
Sbjct: 403 M 403
Score = 40.7 bits (91), Expect = 0.039
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R IG+TT E+ EKD AL RRFQ++ +P+
Sbjct: 306 GELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPT 342
>UniRef50_UPI00015B91DB Cluster: UPI00015B91DB related cluster; n=1;
unknown|Rep: UPI00015B91DB UniRef100 entry - unknown
Length = 831
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = -1
Query: 765 EACNTGHHGLNIRHINGFLAFAYRHQACASARFVDNINGFIRQMTIVNVFHRQFYRRTHR 586
+A + G GL++ +G LA RHQ A VD+++ + Q+ +V+V RQ +RR H
Sbjct: 387 DARHRGDGGLDLLDADGALAARLRHQHLRGAGLVDHVDRLVGQLAVVDVAGRQLHRRLHG 446
Query: 585 FCGITHVVVRLILRFQAIVDLNSFFD 508
G+ +V L +R Q + DL+ D
Sbjct: 447 LGGVFELVELLEIRLQPLEDLDRVRD 472
>UniRef50_Q9RVB2 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpC; n=4; Deinococci|Rep: ATP-dependent Clp
protease, ATP-binding subunit ClpC - Deinococcus
radiodurans
Length = 747
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL- 690
ET+QI GLKPKY HH V+ + R+ PDKAID+IDEA +R RL
Sbjct: 340 ETLQILRGLKPKYEEHHGVQIPDSALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLN 399
Query: 691 ----MPVSKRKK---TVNVADIESVV 747
+PV++ + V D+ESV+
Sbjct: 400 MSVGLPVAENESGEPMVTREDMESVI 425
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I+VIG+TT E+ EKD AL RRFQ + + EPS
Sbjct: 301 GEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPS 337
>UniRef50_Q899V4 Cluster: Negative regulator of genetic competence
mecB; n=12; Firmicutes|Rep: Negative regulator of
genetic competence mecB - Clostridium tetani
Length = 767
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ET++I N +K Y +H V+ + YI DR+LPDKAIDVIDEA +R
Sbjct: 320 VKETIEILNNIKIYYEDYHKVKISKKIIEEAVKLSERYITDRYLPDKAIDVIDEASSRVN 379
Query: 688 L 690
L
Sbjct: 380 L 380
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G I+VIG+TT +E+ EKD AL RRFQ I + EPS K+
Sbjct: 283 GDIQVIGATTLEEYRKYIEKDSALERRFQPILVEEPSVKE 322
>UniRef50_O24875 Cluster: ATP-dependent C1p protease; n=4;
Helicobacter|Rep: ATP-dependent C1p protease -
Helicobacter pylori (Campylobacter pylori)
Length = 741
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +1
Query: 538 LKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 717
+ P Y HH VRY Y++D+ LPDKAI+++DE G+R ++ P K+ K
Sbjct: 351 IAPLYEEHHQVRYDESVFKACVDLTSDYMHDKFLPDKAIELLDEVGSRKKISP--KKGKK 408
Query: 718 VNVADIESVVA 750
+ V D++ +A
Sbjct: 409 IGVDDVKETLA 419
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLF 523
K + G ++ +G+TT++E+ ++FEKD+A RRF I + EPS + +
Sbjct: 298 KPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSVIKVEEPSKEACY 345
>UniRef50_A0RNV1 Cluster: ATP-dependent Clp protease ATP-binding
subunit ClpA; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: ATP-dependent Clp protease ATP-binding
subunit ClpA - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 732
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLF 523
+G IR IG+TTY EF N F KD+AL RRF KID++EP+ + F
Sbjct: 271 NGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECF 312
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+E I GLK Y H+V Y+ Y++D+ LPD AID+IDE GA+ +
Sbjct: 309 DECFLILKGLKSTYEKFHNVTYSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSI 368
Query: 691 MPVSK 705
+K
Sbjct: 369 ANPNK 373
>UniRef50_Q015E8 Cluster: AAA ATPase, central region:Clp, N
terminal:C; n=3; Viridiplantae|Rep: AAA ATPase, central
region:Clp, N terminal:C - Ostreococcus tauri
Length = 839
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+++ I GL+ Y HH V + YINDR LPDKAIDVIDEAGA +L
Sbjct: 389 EQSLTILRGLRATYEEHHGVSISDEALSAAVTLATRYINDRFLPDKAIDVIDEAGALVQL 448
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+++ IG+TT E+ EKD AL RRFQ + + EPS ++
Sbjct: 351 GELQCIGATTIDEYRKHIEKDAALERRFQPVRVNEPSPEQ 390
>UniRef50_Q2GE93 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: ATP-dependent Clp protease, ATP-binding
subunit ClpA - Neorickettsia sennetsu (strain Miyayama)
Length = 740
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G +R IG+TTY+E+S FEKD AL RRFQ+I+I EPS
Sbjct: 314 GPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPS 350
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA--R 681
+ +T+ I +G K Y H V YT YI +R PDKAID++D+ GA
Sbjct: 351 ISDTLNIIDGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRAFPDKAIDLMDDLGASYN 410
Query: 682 ARLMPVSKRK-KTVNVADIESVVAR 753
A L + KR+ + +++ + +A+
Sbjct: 411 AELFDIKKRRDRKIDIKYVRETLAK 435
>UniRef50_Q0LQN6 Cluster: ATPase AAA-2; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: ATPase AAA-2 - Herpetosiphon
aurantiacus ATCC 23779
Length = 776
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
+EETV I G++PKY AHH++ + YI D +LP KAID++DEA +R
Sbjct: 346 IEETVTILQGIRPKYEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASR 403
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
GK+RVIG+TT+ E+S EKD AL RRFQ I + EP
Sbjct: 309 GKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEP 344
>UniRef50_Q00GN0 Cluster: Plastid Clp protease; n=1; Karenia
brevis|Rep: Plastid Clp protease - Karenia brevis
(Dinoflagellate)
Length = 718
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLM 693
+TV I GLK +Y HH VR + YI DR LPDKAID++DE+ A+ ++
Sbjct: 447 DTVSILRGLKGRYEVHHGVRISDSALVAAAMLSDRYIADRFLPDKAIDLVDESMAKLKME 506
Query: 694 PVSK 705
SK
Sbjct: 507 STSK 510
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
K L G++R IG+TT E+ EKD AL RRFQ + + +P++
Sbjct: 402 KPLLARGELRCIGATTLDEYRKYIEKDAALERRFQPVPVAQPTA 445
>UniRef50_Q9X1B1 Cluster: ATP-dependent Clp protease, ATPase
subunit; n=3; Thermotogaceae|Rep: ATP-dependent Clp
protease, ATPase subunit - Thermotoga maritima
Length = 791
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T++I GL+ + HH V+ T YI +R LPDKA+D+IDEA A R
Sbjct: 345 VEQTIEILKGLRKVFEEHHHVKITDDALEAAAKLSARYITNRFLPDKAVDLIDEAAAYVR 404
Query: 688 L 690
L
Sbjct: 405 L 405
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+G+I++IG+TT +E+ EKDRAL RRFQ + + EP+
Sbjct: 307 TGEIQIIGATTVEEYRKYIEKDRALERRFQPVMVEEPT 344
>UniRef50_A5IZ65 Cluster: ClpB; n=6; Mycoplasma|Rep: ClpB -
Mycoplasma agalactiae
Length = 720
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K L GK+ +IG+TTY E+ EKD AL RR QK+DI EPS
Sbjct: 164 KPLMARGKMHLIGATTYNEYRKYIEKDAALERRMQKVDILEPS 206
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA 678
+++T+ I G+K ++ +H+V+ YI+DR LPDKAID++DEA A
Sbjct: 207 IDDTITILRGIKSRFENYHNVKIQDDALVAAAKLSSRYISDRFLPDKAIDLVDEAAA 263
>UniRef50_P49574 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpA homolog; n=3; Bacillariophyta|Rep:
ATP-dependent Clp protease ATP-binding subunit clpA
homolog - Odontella sinensis (Marine centric diatom)
Length = 885
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/58 (44%), Positives = 34/58 (58%)
Frame = +1
Query: 517 TVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
T++I GL+ K+ HH + Y +I DR LPDKAIDV+DEAG+R RL
Sbjct: 357 TIEILLGLRSKFEEHHTLSYHDKAVEQAAILADKFIADRFLPDKAIDVLDEAGSRVRL 414
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
GK R IG+TT E+ E+D AL RRFQ + + EP+
Sbjct: 317 GKFRCIGATTIDEYRKYIERDPALERRFQPVHVKEPT 353
>UniRef50_Q5KDZ1 Cluster: Chaperone, putative; n=2; Filobasidiella
neoformans|Rep: Chaperone, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 834
Score = 52.8 bits (121), Expect = 9e-06
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE T+ I GLK ++ H V+ YI+DR LPDKAID++DEA + +
Sbjct: 255 VESTISILRGLKSRFEVHFGVQIADSALVTAAVYSDRYISDRFLPDKAIDLVDEASSALK 314
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
L S R + D E+V I R
Sbjct: 315 LAQES-RPTELEKLDRETVTLEIER 338
Score = 40.7 bits (91), Expect = 0.039
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 404 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
++++G+TT E+ EKD AL RRFQ I I EPS
Sbjct: 220 LQLVGATTLDEYRKSIEKDAALQRRFQPIMINEPS 254
>UniRef50_Q89YY3 Cluster: Chaperone protein clpB; n=112;
Bacteria|Rep: Chaperone protein clpB - Bacteroides
thetaiotaomicron
Length = 862
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +1
Query: 517 TVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
T+ I GLK +Y HH VR YI DR LPDKAID++DEA A+ R+
Sbjct: 344 TISILRGLKERYENHHHVRIKDDAIIAAVELSSRYITDRFLPDKAIDLMDEAAAKLRM 401
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
G++R IG+TT E+ FEKD+AL RRFQ + + EP +
Sbjct: 304 GELRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDT 341
>UniRef50_Q7U3T3 Cluster: Chaperone protein clpB 2; n=10;
Bacteria|Rep: Chaperone protein clpB 2 - Synechococcus
sp. (strain WH8102)
Length = 900
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E +++I GL+ +Y HH V T YI+DR LPDKAID+IDEA A+ +
Sbjct: 379 LELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAIDLIDEAAAQLK 438
Query: 688 LMPVSK 705
+ SK
Sbjct: 439 IEVTSK 444
Score = 41.1 bits (92), Expect = 0.030
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G +R IG+TT +E+ EKD AL RRFQ++ I EP
Sbjct: 342 GDLRCIGATTPEEYRRTVEKDPALNRRFQQVLIREP 377
>UniRef50_P31540 Cluster: Heat shock protein HSP98; n=23;
Dikarya|Rep: Heat shock protein HSP98 - Neurospora
crassa
Length = 927
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V ET+ I GLK KY HH V + Y+ R LPD AID+IDEA A R
Sbjct: 362 VSETISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAAAAVR 421
Query: 688 L 690
+
Sbjct: 422 V 422
Score = 41.1 bits (92), Expect = 0.030
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++ IG+TT E+ EKD A RRFQ++ + EPS
Sbjct: 319 KPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPS 361
>UniRef50_A7I2C9 Cluster: ATP-dependent CLP protease ATP-binding
subunit; n=1; Campylobacter hominis ATCC BAA-381|Rep:
ATP-dependent CLP protease ATP-binding subunit -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 729
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 353 ADFRDFPAHKTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
AD D A K +G+I IG+TTY EF + F KD+AL RRF KIDI EP+ + FK
Sbjct: 296 ADLAD--ALKPALANGEISCIGATTYAEFRD-FGKDKALLRRFNKIDICEPTLEDSFK 350
Score = 42.3 bits (95), Expect = 0.013
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E++ +I G P+Y H V+++ Y++D+ LPD A D+IDE GA
Sbjct: 345 LEDSFKILKGGAPRYENFHGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLIDEIGASFS 404
Query: 688 LMPVSKRKKTVNVADIESVVA 750
L +V I SV+A
Sbjct: 405 LKGRHGEVSQDDVRKILSVMA 425
>UniRef50_A3CMZ1 Cluster: ATPases with chaperone activity,
ATP-binding subunit, putative; n=1; Streptococcus
sanguinis SK36|Rep: ATPases with chaperone activity,
ATP-binding subunit, putative - Streptococcus sanguinis
(strain SK36)
Length = 747
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA--RA 684
++ + I GL+ Y H VR T Y++DR+LPDKA+D+IDEA A +
Sbjct: 346 DKALAILQGLRENYQDFHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKI 405
Query: 685 RLMPVSKRKKTVNVADIESVVARI 756
+L + V+ DI S+V RI
Sbjct: 406 QLGQAQTERPDVSREDIASIVERI 429
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
K L G+I +IG+TT+ + FE D+AL RFQ++ I EP K
Sbjct: 302 KPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDK 347
>UniRef50_Q7BM22 Cluster: STMD1.46 protein; n=3; Salmonella|Rep:
STMD1.46 protein - Salmonella typhimurium LT2
Length = 49
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1
Query: 4 ALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALS 120
A+QGVYAMSLEY++LT IAL GS WI SA+ G L+
Sbjct: 7 AVQGVYAMSLEYVLLTAIALMGSFSWIKSAQRNGYMPLA 45
>UniRef50_A4BEV2 Cluster: Putative ATPase subunit of ATP-dependent
protease; n=2; Gammaproteobacteria|Rep: Putative ATPase
subunit of ATP-dependent protease - Reinekea sp. MED297
Length = 923
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
++ + + NGL+ Y +HH V+ T YI R+LPDKAID++D A AR R
Sbjct: 365 LDSAILMLNGLRDTYQSHHQVQITDAAIDAAVTLSDRYITGRYLPDKAIDLLDTAAARVR 424
Query: 688 L 690
+
Sbjct: 425 M 425
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD AL RRFQ I + EPS
Sbjct: 328 GELRTIAATTFSEYKQYFEKDPALVRRFQNITVEEPS 364
>UniRef50_Q9KAV7 Cluster: ATP-dependent proteinase; n=1; Bacillus
halodurans|Rep: ATP-dependent proteinase - Bacillus
halodurans
Length = 711
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E V+I G++P Y A+H V Y YI DR LPDKAID++DE G+
Sbjct: 268 LEAAVEILKGVRPIYEAYHHVSYPDDVLEACVRLSDRYIQDRFLPDKAIDLMDEIGSALT 327
Query: 688 L 690
L
Sbjct: 328 L 328
Score = 41.1 bits (92), Expect = 0.030
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++++IG+TT E+ I EKD AL RRFQ I + EP+
Sbjct: 232 GQLQIIGATTLNEYRKI-EKDPALERRFQPITVKEPT 267
>UniRef50_Q7QSI1 Cluster: GLP_64_7313_4665; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_7313_4665 - Giardia lamblia ATCC
50803
Length = 882
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYIN--DRHLPDKAIDVIDEAGAR 681
VE+T+ I GL +Y +HH +R T Y+ RH PD AID++DEAGA
Sbjct: 343 VEDTISILRGLSGRYQSHHQIRITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGAS 402
Query: 682 ARL 690
R+
Sbjct: 403 VRV 405
Score = 40.7 bits (91), Expect = 0.039
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+IR IG+TT +E+ N DRA RRF ++ + EP+
Sbjct: 306 GEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPN 342
>UniRef50_P31539 Cluster: Heat shock protein 104; n=14;
Ascomycota|Rep: Heat shock protein 104 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 908
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+++VIG+TT E+ +I EKD A RRFQKI++ EPS ++
Sbjct: 308 GQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQ 347
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVID 666
V +TV I GL+PKY HH VR Y+ R LPD A+D++D
Sbjct: 345 VRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVD 397
>UniRef50_Q8DTC7 Cluster: Chaperone protein clpB; n=1; Streptococcus
mutans|Rep: Chaperone protein clpB - Streptococcus
mutans
Length = 860
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
++ T++I GLKP Y H VR YI+DR LPDKA+D+IDEA A R
Sbjct: 345 LDYTMEILKGLKPIYENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKR 404
Query: 688 L 690
L
Sbjct: 405 L 405
Score = 49.6 bits (113), Expect = 9e-05
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
K L GKIR+IGSTT+ E+ E DRAL RRFQ+I + EP
Sbjct: 302 KPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEP 343
>UniRef50_Q7AJA9 Cluster: Chaperone protein clpB; n=22;
Bacteria|Rep: Chaperone protein clpB - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 866
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+ V I GL+ KY H VR T YI DR LPDKAID+IDEA + R
Sbjct: 342 LEDAVFILRGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIR 401
Query: 688 L 690
+
Sbjct: 402 M 402
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G + IG+TT E+ EKD AL RRFQ I +TEPS
Sbjct: 305 GTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPS 341
>UniRef50_O51342 Cluster: ATP-dependent Clp protease, subunit A;
n=3; Borrelia burgdorferi group|Rep: ATP-dependent Clp
protease, subunit A - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 763
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ I +K Y +H+V YT YI DR LPDKA D++DE G++ +L
Sbjct: 375 EDAYNILQEIKKDYERYHNVEYTDEAIQACILMSQKYIKDRFLPDKAFDILDELGSKFKL 434
Query: 691 MPVSKRKKTVNVAD-IESVV 747
+ + +V D I+S+V
Sbjct: 435 ENIKRIITKDDVCDLIKSIV 454
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
GKI+ IG+TT E+ F KD+AL RRFQ I++ EP+
Sbjct: 337 GKIKFIGATTEYEYRKFFLKDKALMRRFQSIELKEPN 373
>UniRef50_A6NVT1 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 858
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+ VQI G+K Y +H V + YI DR+LPDKAID+IDEA +
Sbjct: 334 IEDAVQIIMGIKSYYEKYHFVSISPEMARLAVTMSERYITDRYLPDKAIDLIDEACSDVN 393
Query: 688 LMPVSKRKKTVNVADIESV 744
L + ++ D+E++
Sbjct: 394 LHNANLAREAQLKKDLEAI 412
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I+VIG+TT E+ EKD AL RRFQ + + EPS
Sbjct: 297 GEIQVIGATTLTEYRKYIEKDSALERRFQPVIVEEPS 333
>UniRef50_A5UYN2 Cluster: ATPase AAA-2 domain protein precursor;
n=1; Roseiflexus sp. RS-1|Rep: ATPase AAA-2 domain
protein precursor - Roseiflexus sp. RS-1
Length = 786
Score = 49.6 bits (113), Expect = 9e-05
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLM 693
ET+ I GL+ K HH + YI D + PDKAI V+DEA AR RL+
Sbjct: 363 ETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAITVLDEACARRRLL 422
Query: 694 PV---SKRKKT--VNVADIESVVAR 753
+ S +T + V DI VVAR
Sbjct: 423 TIHVQSSPTQTSHLEVEDIGQVVAR 447
Score = 41.5 bits (93), Expect = 0.023
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G IR IG+TT E+ E D ALARRFQ + I EPS
Sbjct: 324 GDIRCIGATTIDEYRKHIEPDGALARRFQIVWIDEPS 360
>UniRef50_Q3LW37 Cluster: ATP binding subunit of Clp protease; n=1;
Bigelowiella natans|Rep: ATP binding subunit of Clp
protease - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 897
Score = 49.6 bits (113), Expect = 9e-05
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+ E +QI +G+K + +H V Y+ YI+D+ LPDKAID++DE+GA +
Sbjct: 421 ISEAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDESGAFVK 480
Query: 688 L 690
+
Sbjct: 481 M 481
Score = 39.9 bits (89), Expect = 0.069
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I +IG+TT +EF + D AL RRFQ + + EP+
Sbjct: 384 GEISLIGATTEEEFRKYIKADGALERRFQAVKVPEPT 420
>UniRef50_Q7NAZ3 Cluster: Chaperone protein clpB; n=8;
Mollicutes|Rep: Chaperone protein clpB - Mycoplasma
gallisepticum
Length = 717
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+E + I GL+ ++ A H VR YI+DR+LPDKAID+IDEA A+ +
Sbjct: 199 QEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKAIDLIDEAAAKIKT 258
Query: 691 M 693
+
Sbjct: 259 L 259
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
K + G+I+VIG+TT E+ EKD AL RR QKI + EP+ ++
Sbjct: 155 KPMMARGEIKVIGATTIDEYRKYIEKDGALERRMQKILVDEPTKQE 200
>UniRef50_Q826F2 Cluster: Chaperone protein clpB 2; n=51; cellular
organisms|Rep: Chaperone protein clpB 2 - Streptomyces
avermitilis
Length = 879
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ + H V+ YI DR LPDKAID++DEA AR R
Sbjct: 348 VEDTISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLR 407
Query: 688 L----MPVSKRKKTVNVADIESVVARIAR 762
MP + T V +E A +++
Sbjct: 408 TEIDSMPAELDEITRRVTRLEIEEAALSK 436
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++ +IG+TT E+ EKD AL RRFQ++ + EPS
Sbjct: 305 KPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPS 347
>UniRef50_Q7N4N8 Cluster: Similar to ClpA/B-type chaperone; n=1;
Photorhabdus luminescens subsp. laumondii|Rep: Similar
to ClpA/B-type chaperone - Photorhabdus luminescens
subsp. laumondii
Length = 860
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD ALARRFQ I + EPS
Sbjct: 317 GELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPS 353
Score = 39.5 bits (88), Expect = 0.091
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E + + + P HH+V+ YI R LPDK++ ++D A AR
Sbjct: 354 LELAIAMLRAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACAR-- 411
Query: 688 LMPVSKRKKTVNVADIESVVARIARFQ 768
+ VS+ + + D+ +++A IA Q
Sbjct: 412 -VAVSQTDEPAPIEDLRAMLANIAAEQ 437
>UniRef50_Q62G32 Cluster: ClpA/B type protease; n=18; Bacteria|Rep:
ClpA/B type protease - Burkholderia mallei (Pseudomonas
mallei)
Length = 897
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD ALARRFQ + I EPS
Sbjct: 343 GELRTIAATTWSEYKKYFEKDAALARRFQVVKIEEPS 379
Score = 33.5 bits (73), Expect = 6.0
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 559 HHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD-- 732
H +VR YI+ R LPDKAI V+D A A+ L S ++ A
Sbjct: 397 HFNVRVLDDAITEAVRLSHRYISGRQLPDKAISVLDTACAKVALAH-SSTPAAIDDAKKR 455
Query: 733 IESVVARIARFQR 771
IE + A IA +R
Sbjct: 456 IERIDAEIAALER 468
>UniRef50_A4FG52 Cluster: Clp protease ATP binding subunit; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Clp protease
ATP binding subunit - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 768
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +TV + GL+ +Y HH V YI DR LPDKA+D++D+A +R R
Sbjct: 344 VGDTVAVLRGLRDRYQLHHRVVIADDALVAAARLSQRYIADRFLPDKAVDLLDQACSRVR 403
Query: 688 LM 693
L+
Sbjct: 404 LL 405
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++V+G+TT +E+ EKD AL RRFQ I + EPS
Sbjct: 307 GEVQVVGATTVEEYRKHIEKDPALERRFQPILVAEPS 343
>UniRef50_A7TPM4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 913
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G ++VIG+TT E+ +I EKD A RRFQKID+ EP+ ++
Sbjct: 308 GGLKVIGATTNNEYRSIVEKDGAFERRFQKIDVCEPTVRQ 347
Score = 39.9 bits (89), Expect = 0.069
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVID 666
V +TV I GL+ KY HH VR Y+ R LPD A+D++D
Sbjct: 345 VRQTVAILRGLQQKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVD 397
>UniRef50_Q74G19 Cluster: ClpB protein, putative; n=5;
Proteobacteria|Rep: ClpB protein, putative - Geobacter
sulfurreducens
Length = 875
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD ALARRFQ + + EPS
Sbjct: 324 GELRTIAATTWSEYKKYFEKDAALARRFQPVKLDEPS 360
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE V I GLK Y A H V Y++ R LPDKA+D++D A AR +
Sbjct: 361 VETAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYLSGRQLPDKAVDLLDTAAARVK 420
Query: 688 LMPVSK 705
L+ K
Sbjct: 421 LLLTGK 426
>UniRef50_Q39K50 Cluster: Chaperonin clpA/B/, ATPase; n=27;
Proteobacteria|Rep: Chaperonin clpA/B/, ATPase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 889
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD ALARRFQ + + EPS
Sbjct: 335 GELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPS 371
>UniRef50_O51774 Cluster: ATP-dependent Clp protease, subunit C;
n=3; Borrelia burgdorferi group|Rep: ATP-dependent Clp
protease, subunit C - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 739
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +2
Query: 401 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
+I++IG+TTY E+ KD+A ARRFQ I + EP K K
Sbjct: 303 EIQIIGATTYNEYRKYISKDKAFARRFQTITVKEPDEKDTLK 344
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA 678
++T++I + + +H V Y Y+ ++ PDKAID+ID AGA
Sbjct: 340 KDTLKIIENIAKNFEDYHGVIYEKSALLNIVKLSSKYLINKRFPDKAIDIIDIAGA 395
>UniRef50_UPI000049A1E8 Cluster: HSP101-related protein; n=8;
Entamoeba histolytica HM-1:IMSS|Rep: HSP101-related
protein - Entamoeba histolytica HM-1:IMSS
Length = 842
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA 678
VE+T+ I G++ KY H+ + T YIN R LPDKAID++DEA A
Sbjct: 342 VEDTLYILRGIREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACA 398
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT +E+ EKD A RRFQ++ ++EPS
Sbjct: 299 KPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPS 341
>UniRef50_Q1WR72 Cluster: ATP-dependent Clp protease; n=1;
Lactobacillus salivarius subsp. salivarius UCC118|Rep:
ATP-dependent Clp protease - Lactobacillus salivarius
subsp. salivarius (strain UCC118)
Length = 606
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
++ V++ G++ Y H + YT YI DR LPDKAID++D+AG+ A
Sbjct: 189 DDAVKVLFGIRDNYEKFHHLVYTDEAVEACVDLSLRYIGDRQLPDKAIDLLDQAGSIA-- 246
Query: 691 MPVSKRKKTVNVADIESVV 747
+K ++ ++V DI V+
Sbjct: 247 --ATKGQEIIDVKDIALVL 263
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I++IG+TT+ E+ EKD AL RRFQ+I + EPS
Sbjct: 151 GEIQLIGATTFDEYDKFIEKDPALERRFQQILVNEPS 187
>UniRef50_A0NQ21 Cluster: ATP-dependent Clp protease ATP-binding
subunit; n=2; Rhodobacteraceae|Rep: ATP-dependent Clp
protease ATP-binding subunit - Stappia aggregata IAM
12614
Length = 935
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLF 523
G +R + +TT+ E+ FEKD AL RRFQ + + EP +K F
Sbjct: 339 GTLRTVAATTWSEYRQHFEKDPALTRRFQPVQVDEPDEEKCF 380
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 559 HHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 726
HH VR YI R LPDKA+ V+D A AR + ++ + +++
Sbjct: 393 HHQVRILDSAVRSAVSLSHRYIPARQLPDKAVSVLDTASARVNISQAAQPARLLDL 448
>UniRef50_O67588 Cluster: Chaperone protein clpB; n=2; Aquifex
aeolicus|Rep: Chaperone protein clpB - Aquifex aeolicus
Length = 1006
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+T++I GL+P+ H V+ + Y+ R LPDKAID +D+A AR +L
Sbjct: 477 EQTIEILKGLRPRLEQFHKVKISDEAIEAAVKLTKRYVTFRRLPDKAIDALDQAAARKKL 536
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+IRVIG+TT E+ EKD AL RRFQ + + EP+ ++
Sbjct: 439 GEIRVIGATTVDEYRKYIEKDPALERRFQPVFVDEPTEEQ 478
>UniRef50_A7JYI1 Cluster: ATPases with chaperone activity,
ATP-binding subunit; n=8; Gammaproteobacteria|Rep:
ATPases with chaperone activity, ATP-binding subunit -
Vibrio sp. Ex25
Length = 892
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G+++ I +TT+ E+ FEKD ALARRFQ + + EPS ++
Sbjct: 321 GEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQ 360
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ I GL+P Y H+V YI+ R LPDKAIDV+D A AR +
Sbjct: 359 EQAALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNI 418
>UniRef50_Q06716 Cluster: ATP-dependent Clp protease ATP-binding
subunit clpL; n=84; cellular organisms|Rep:
ATP-dependent Clp protease ATP-binding subunit clpL -
Lactococcus lactis subsp. lactis (Streptococcus lactis)
Length = 763
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGA 678
+T++I G+K Y HH V YI++RHLPDKAID+ID+ G+
Sbjct: 322 DTLRILQGIKELYEKHHHVVLPDDEKKAAVDYSIKYIHNRHLPDKAIDLIDDCGS 376
Score = 39.9 bits (89), Expect = 0.069
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 401 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
K+ VIG+TT E+ N K+ ALARRF + I EP++
Sbjct: 284 KLSVIGATTQDEYRNTILKNAALARRFNDVVINEPTA 320
>UniRef50_Q882S7 Cluster: ClpB protein, putative; n=3;
Gammaproteobacteria|Rep: ClpB protein, putative -
Pseudomonas syringae pv. tomato
Length = 867
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD ALARRFQ + + EP+
Sbjct: 311 GELRTIAATTWAEYRQYFEKDPALARRFQPVRVLEPT 347
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+ V I GL P Y H V YI+ R LPDKAID++D A AR +
Sbjct: 348 VEQAVTILRGLAPLYEQSHGVYLRDDAVVAAARLSARYISGRQLPDKAIDLLDTACARVQ 407
Query: 688 LMPVS 702
+ V+
Sbjct: 408 ISLVA 412
>UniRef50_Q5GYC2 Cluster: ClpB; n=24; Proteobacteria|Rep: ClpB -
Xanthomonas oryzae pv. oryzae
Length = 932
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G +R +G+TT+ E+ EKD AL RRFQ + + EP K
Sbjct: 359 GTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDEAK 398
>UniRef50_Q6TKU1 Cluster: Aec27; n=17; Enterobacteriaceae|Rep: Aec27
- Escherichia coli
Length = 919
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
G+++ I +TT+ E+ FEKD AL+RRFQ + ++EP++
Sbjct: 323 GELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNA 360
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E I GL Y H V Y++ R LPDKAIDV+D A AR +
Sbjct: 362 EATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAI 420
>UniRef50_Q1N528 Cluster: ATPase with chaperone activity,
ATP-binding subunit; n=1; Oceanobacter sp. RED65|Rep:
ATPase with chaperone activity, ATP-binding subunit -
Oceanobacter sp. RED65
Length = 859
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+ R I +TT+ E+ FEKD AL RRFQ + + EPS
Sbjct: 329 GEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPS 365
>UniRef50_Q28MX2 Cluster: ATPase AAA-2; n=3;
Alphaproteobacteria|Rep: ATPase AAA-2 - Jannaschia sp.
(strain CCS1)
Length = 864
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G+ R I +TT+ E+ FEKD AL RRFQ + + EP
Sbjct: 319 GEFRTIAATTWSEYKKYFEKDAALTRRFQPVKVAEP 354
Score = 40.7 bits (91), Expect = 0.039
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E V++ + ++ HH V Y+ +R LPDKA+ VID A A R
Sbjct: 356 IETAVRMLRAVSSRFEDHHGVSIRESAVRAAVELSARYLPERQLPDKAVSVIDTAAAAVR 415
Query: 688 L----MPVSKRKKTVNVADIESVVARI 756
L P + + A +E+ +AR+
Sbjct: 416 LSRDVTPDALARHRTEAAHLEAEIARL 442
>UniRef50_Q0WCW6 Cluster: Clp ATPase; n=21; Proteobacteria|Rep: Clp
ATPase - Yersinia pestis
Length = 891
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G++R IG+TT+ EF EKD AL RRFQ + + EP
Sbjct: 336 GQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEP 371
>UniRef50_A6B0S5 Cluster: ATPase with chaperone activity,
ATP-binding subunit; n=5; Gammaproteobacteria|Rep:
ATPase with chaperone activity, ATP-binding subunit -
Vibrio parahaemolyticus AQ3810
Length = 855
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ FEKD AL RRFQ + + EP+
Sbjct: 316 GELRTIAATTWAEYKKYFEKDAALTRRFQVVKVDEPT 352
Score = 40.7 bits (91), Expect = 0.039
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E V + GL HHDV T YIN R LPDKA+ V+D A +R L
Sbjct: 354 ELAVDMLRGLVNIMGQHHDVYITSQALNAAVQLSARYINGRQLPDKAVSVLDTACSRVAL 413
Query: 691 M------PVSKRKKTVNVADIE 738
+ +KK +N+ + E
Sbjct: 414 SQSATPGALDSKKKKLNIKEAE 435
>UniRef50_Q9F746 Cluster: Chaperone protein clpB; n=42;
Proteobacteria|Rep: Chaperone protein clpB - Yersinia
enterocolitica
Length = 890
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G++R IG+TT+ EF EKD AL RRFQ + + EP
Sbjct: 335 GQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEP 370
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ + + GL P HH V YI R LPDKAI ++D A AR +
Sbjct: 373 DTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTACARVAV 432
Query: 691 MPVSK 705
S+
Sbjct: 433 AQFSQ 437
>UniRef50_Q62CW1 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpB; n=19; Proteobacteria|Rep: ATP-dependent
Clp protease, ATP-binding subunit ClpB - Burkholderia
mallei (Pseudomonas mallei)
Length = 1027
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G++R I +TT+ E+ FEKD ALARRFQ + + P
Sbjct: 328 GELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSP 363
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/88 (31%), Positives = 40/88 (45%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +V I GLK +Y H V YI R LPDKAID++D A AR +
Sbjct: 365 VATSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVK 424
Query: 688 LMPVSKRKKTVNVADIESVVARIARFQR 771
V ++ K + D + + + R +R
Sbjct: 425 ---VRQQTKPAALEDAQRAIQALERERR 449
>UniRef50_Q2T6Y8 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpB; n=1; Burkholderia thailandensis E264|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpB -
Burkholderia thailandensis (strain E264 / ATCC 700388 /
DSM 13276 /CIP 106301)
Length = 958
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G++R I +TT+ E+ FEKD ALARRFQ + + P
Sbjct: 330 GELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSP 365
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/88 (32%), Positives = 40/88 (45%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +V I GLK +Y H V YI R LPDKAID++D A AR +
Sbjct: 367 VATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACARVK 426
Query: 688 LMPVSKRKKTVNVADIESVVARIARFQR 771
V ++ K + D E + + R +R
Sbjct: 427 ---VRQQTKPAALEDAERAIQALERERR 451
>UniRef50_A7APH1 Cluster: Clp amino terminal domain containing
protein; n=1; Babesia bovis|Rep: Clp amino terminal
domain containing protein - Babesia bovis
Length = 1005
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSK 514
G+I+ I TT +E+ FEKD AL RRFQ I + EPS K
Sbjct: 409 GEIQCIAITTPKEYQKHFEKDAALCRRFQPIHVKEPSDK 447
Score = 41.1 bits (92), Expect = 0.030
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 562 HDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
H+V+Y +I +R+LPDKAID++DEAG+ A++
Sbjct: 464 HNVKYNMDAVAAALKYSKQFIPERYLPDKAIDILDEAGSLAKI 506
>UniRef50_Q2GIB0 Cluster: Cation efflux family protein; n=1;
Anaplasma phagocytophilum HZ|Rep: Cation efflux family
protein - Anaplasma phagocytophilum (strain HZ)
Length = 301
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -3
Query: 412 YTNFTAELKRLMCREIPEVRNVHHVHVW-MVGEKPVMTLHVQV 287
Y EL+R + IP V +VHHVH+W + E P+MT+HV++
Sbjct: 216 YNIDVGELQRNITSAIPNVIDVHHVHLWSLTAEYPIMTMHVRI 258
>UniRef50_A6FZR3 Cluster: ATP-dependent chaperone protein ClpB; n=1;
Plesiocystis pacifica SIR-1|Rep: ATP-dependent chaperone
protein ClpB - Plesiocystis pacifica SIR-1
Length = 921
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R + +TT+ E+ FEKD AL RRFQ + EPS
Sbjct: 333 GELRTVAATTWSEYKKYFEKDPALERRFQPVKCDEPS 369
Score = 42.7 bits (96), Expect = 0.010
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+ V + GL KY H V YI+ R LPDKA+D++D A AR +
Sbjct: 370 VEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAARVK 429
Query: 688 LMPVSKRKKTVNVADIESVVARIAR 762
+ + K + ++E +A + R
Sbjct: 430 ---IEQGAKPQRIEELELELASLDR 451
>UniRef50_A3HMX2 Cluster: 200 kDa antigen p200, putative; n=1;
Pseudomonas putida GB-1|Rep: 200 kDa antigen p200,
putative - Pseudomonas putida (strain GB-1)
Length = 775
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = -1
Query: 738 LNIRHINGFLAFAYRHQACASARFVDNINGFIRQMTIVNVFHRQFYRRTHRFCGITHVVV 559
L++RHI+ A R Q A FVD ++G +R + +++V QF F + VVV
Sbjct: 347 LDLRHIDALDAVGLRLQTLVGAGFVDYVDGLVRHVPVIDVARGQFSGGAQGFVTVLDVVV 406
Query: 558 RLILRFQAIVDLNSFFD 508
QA + + FD
Sbjct: 407 AFETPLQAAQNAHGVFD 423
Score = 37.9 bits (84), Expect = 0.28
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -3
Query: 508 RRFSNINFLEATRQSTVFLENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHH 341
R ++++ LEA Q TV LE+ A+LL G R + T+FT +RL +V +HH
Sbjct: 424 RWLADVHLLEAPCQRTVLLEDAAKLLEGGRADTTDFTRRQQRL-----EQVGGIHH 474
>UniRef50_Q8D6U5 Cluster: ATPase with chaperone activity,
ATP-binding subunit; n=5; Gammaproteobacteria|Rep:
ATPase with chaperone activity, ATP-binding subunit -
Vibrio vulnificus
Length = 854
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ EKD AL RRFQ + I EPS
Sbjct: 315 GELRTIAATTWAEYKKYVEKDAALTRRFQVVKIEEPS 351
Score = 39.5 bits (88), Expect = 0.091
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E +++ GL P HH V T YI+ R LPDKA+ V+D A +R L
Sbjct: 353 ELAIEMLRGLVPVMEKHHGVHITTEALKAAVFLSSRYISGRQLPDKAVSVLDTACSRVAL 412
>UniRef50_A3P1S7 Cluster: Chaperone clpB; n=15; Burkholderia|Rep:
Chaperone clpB - Burkholderia pseudomallei (strain
1106a)
Length = 979
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G IR IG+TT+ E+ EKD AL RRFQ + + EP
Sbjct: 336 GTIRTIGATTWAEYKRHIEKDPALTRRFQVLQVPEP 371
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +1
Query: 520 VQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
V + G+ + HH V YI RHLPDKAI ++D A AR L
Sbjct: 377 VHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRHLPDKAISLLDTACARVAL 433
>UniRef50_Q8IM28 Cluster: ATP-dependent Clp protease, putative; n=3;
Plasmodium|Rep: ATP-dependent Clp protease, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1341
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
S ++ IG+TT+QE+S E D+AL RRF + I +SK+ +K
Sbjct: 649 SDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKETYK 692
Score = 40.3 bits (90), Expect = 0.052
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ET ++ +K Y +H++ YT Y+ + PDKAID++DEAG ++
Sbjct: 688 KETYKLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKI 747
>UniRef50_Q9I742 Cluster: Protein clpV1; n=12; Proteobacteria|Rep:
Protein clpV1 - Pseudomonas aeruginosa
Length = 902
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
G +R + +TT+ E+ EKD AL RRFQ + + EPS K
Sbjct: 337 GTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHK 376
>UniRef50_Q98IM7 Cluster: Probable ClpA/B-type protease; n=1;
Mesorhizobium loti|Rep: Probable ClpA/B-type protease -
Rhizobium loti (Mesorhizobium loti)
Length = 945
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R I +TT+ E+ EKD AL RRFQ + I EPS
Sbjct: 334 GELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPS 370
>UniRef50_A3A5U3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 691
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R +G+TT+ E+ +D A RRFQK+ + EPS
Sbjct: 203 GRVRCLGATTHDEYHRYMVRDAAFERRFQKVHVAEPS 239
>UniRef50_Q89P96 Cluster: ATP-dependent Clp protease ATP-binding
subunit; n=5; Proteobacteria|Rep: ATP-dependent Clp
protease ATP-binding subunit - Bradyrhizobium japonicum
Length = 879
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G +R I +TT+ E+ EKD AL RRFQ I I EP
Sbjct: 334 GTLRTIAATTWAEYRQYIEKDPALTRRFQPIQIDEP 369
Score = 34.7 bits (76), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 559 HHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
HH VR + YI R LPDKA+ ++D A AR +
Sbjct: 388 HHGVRISDAAIVAAVNLSHRYIPSRQLPDKAVSLLDTASARVAI 431
>UniRef50_Q3JGS2 Cluster: ATP-dependent Clp protease ATP-binding
subunit; n=13; Burkholderia|Rep: ATP-dependent Clp
protease ATP-binding subunit - Burkholderia pseudomallei
(strain 1710b)
Length = 956
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R++ +TT+ E+ E D AL RRFQ + + EPS
Sbjct: 325 KPMLARGQLRMVAATTWSEYKQYIEPDAALVRRFQAVAVDEPS 367
Score = 37.5 bits (83), Expect = 0.37
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ V + + P++ AHH VR Y+ R LPDKAI ++D A AR +
Sbjct: 369 DAAVDMLRTIAPRFAAHHGVRIVDSALRGAVELSRRYLPARQLPDKAISLLDTACARVAM 428
>UniRef50_Q1ZER4 Cluster: ClpB protein; n=1; Psychromonas sp.
CNPT3|Rep: ClpB protein - Psychromonas sp. CNPT3
Length = 903
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++ I +TT++E+ FEKD AL RRFQ + + EPS
Sbjct: 323 GELCTIAATTWKEYKKYFEKDPALNRRFQLVKLDEPS 359
Score = 40.3 bits (90), Expect = 0.052
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGAR 681
VE+ V I GL Y H V + Y++ R LPDKAIDV+D A AR
Sbjct: 360 VEQAVDILRGLHQVYEKAHKVLISDEALRAAAELSARYVSGRQLPDKAIDVLDTACAR 417
>UniRef50_Q0PZG4 Cluster: ClpB protein; n=45;
Gammaproteobacteria|Rep: ClpB protein - Aeromonas
hydrophila
Length = 880
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
G++R I +TT+ E+ EKD AL+RRFQ + + EP +
Sbjct: 325 GELRTIAATTWGEYKKYVEKDAALSRRFQLVKVGEPDA 362
Score = 37.1 bits (82), Expect = 0.49
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+E I GL+ Y H V YI+ R LPDKAIDV+D A AR +
Sbjct: 363 DEATVILRGLRSIYEKAHGVLIDEEALQASAQLSARYISGRQLPDKAIDVLDTACARVAI 422
>UniRef50_A7AW26 Cluster: Chaperone clpB, putative; n=1; Babesia
bovis|Rep: Chaperone clpB, putative - Babesia bovis
Length = 833
Score = 41.9 bits (94), Expect = 0.017
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ET+ I +G +P +H V+ T +I +R+LPDKAID++DEA
Sbjct: 336 DETLAILHGSRPSLEDYHGVKITDDALVASVELSTRFIPNRYLPDKAIDLLDEAAM---- 391
Query: 691 MPVSKRKKT 717
+SKRK++
Sbjct: 392 --LSKRKRS 398
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSS 511
K + S +++IGSTT +E+ F +DRA RRF+ + + E S+
Sbjct: 292 KPIMTSTLVKIIGSTTAKEYHQYFRRDRAFERRFEILRLHENSA 335
>UniRef50_A6EIG8 Cluster: Putative ATP-dependent protease; n=1;
Pedobacter sp. BAL39|Rep: Putative ATP-dependent
protease - Pedobacter sp. BAL39
Length = 828
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+I VIG+TT E+ I E ++A +RRF+ + + EP+ K
Sbjct: 313 GEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIK 355
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 538 LKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARLM 693
L KY HH ++ Y+ DR LPD A D++D A ++M
Sbjct: 360 LAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMM 411
>UniRef50_A6BUZ9 Cluster: Hsp100/Clp ATPase; n=11; Yersinia|Rep:
Hsp100/Clp ATPase - Yersinia pestis CA88-4125
Length = 867
Score = 41.5 bits (93), Expect = 0.023
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G +R+I +TT+ E+ E D AL RRFQ++ I EP+
Sbjct: 328 KPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPN 370
>UniRef50_A3UGA9 Cluster: Cation efflux protein; n=3;
Proteobacteria|Rep: Cation efflux protein - Oceanicaulis
alexandrii HTCC2633
Length = 321
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 391 LKRLMCREIPEVRNVHHVHVW-MVGEKPVMTLHVQVIPPHDHDALL 257
L+ + EI +V ++HHVHVW + ++P+ TLH ++ P D A++
Sbjct: 246 LRADLTAEIEDVLDIHHVHVWSLTPDRPMATLHARIEPEADAPAII 291
>UniRef50_A3CKB2 Cluster: ATPase with chaperone activity,
ATP-binding subunit, putative; n=1; Streptococcus
sanguinis SK36|Rep: ATPase with chaperone activity,
ATP-binding subunit, putative - Streptococcus sanguinis
(strain SK36)
Length = 638
Score = 41.5 bits (93), Expect = 0.023
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+I++I +TTY+E+ + E D+AL RR Q + + EP+
Sbjct: 185 GEIQMISATTYEEYQSSIETDKALERRVQMVPVEEPT 221
Score = 40.3 bits (90), Expect = 0.052
Identities = 21/84 (25%), Positives = 44/84 (52%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
++ + I ++ ++ ++ T YI +R LPDKAID++D+A A+A
Sbjct: 223 DQAIFILGNIRRRFEKERNITITDDAVEQAVRLAVRYIPERFLPDKAIDLLDDATAQAYF 282
Query: 691 MPVSKRKKTVNVADIESVVARIAR 762
+++K V++ DI V+ ++ +
Sbjct: 283 ----EKRKVVDIEDIARVIQKMKK 302
>UniRef50_Q7RAR9 Cluster: ATP-dependent Clp protease, ATPase
subunit-related; n=4; Plasmodium (Vinckeia)|Rep:
ATP-dependent Clp protease, ATPase subunit-related -
Plasmodium yoelii yoelii
Length = 1122
Score = 41.5 bits (93), Expect = 0.023
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
S ++ IG+TT+QE+S E D+AL RRF ++I +S + +K
Sbjct: 575 SDNLQCIGTTTFQEYSKYIETDKALRRRFNCVNIKPLNSNETYK 618
Score = 40.3 bits (90), Expect = 0.052
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
ET ++ +K Y +H++ YT Y+ + PDKAID++DEAG+ ++
Sbjct: 615 ETYKLLKKIKNSYEQYHNIYYTDEALKSIILLSDDYLPTLNFPDKAIDILDEAGSYQKI 673
>UniRef50_A5K1F9 Cluster: ATP-dependent Clp protease, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent Clp protease,
putative - Plasmodium vivax
Length = 1222
Score = 41.5 bits (93), Expect = 0.023
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ET+ + +K Y +H++ YT Y+ + PDKAID++DEAGA ++
Sbjct: 649 KETLLLLKKIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKI 708
Score = 36.7 bits (81), Expect = 0.64
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKK 517
S ++ IG+TT+QE++ E D+AL RRF + + + K+
Sbjct: 610 SDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKPFTGKE 650
>UniRef50_UPI0000DB7A0C Cluster: PREDICTED: similar to CG5130-PA,
isoform A; n=2; Apocrita|Rep: PREDICTED: similar to
CG5130-PA, isoform A - Apis mellifera
Length = 511
Score = 40.7 bits (91), Expect = 0.039
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -3
Query: 502 FSNINFLEATRQSTVFLENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVW-M 326
F+ I+ + S +++ +L+ N+ N + LKR + P + NVH +H+W +
Sbjct: 269 FAIISSISLFALSYSYMKESGLILLQTIPNHINIDS-LKRELLEAFPGIVNVHDLHIWQL 327
Query: 325 VGEKPVMTLHVQVIPPHDHDALLDR 251
G+K + T+H+ + P + + D+
Sbjct: 328 TGQKIISTVHIIFLDPTVYTTITDQ 352
>UniRef50_Q8E5L4 Cluster: Putative uncharacterized protein gbs0991;
n=2; Streptococcus agalactiae serogroup III|Rep:
Putative uncharacterized protein gbs0991 - Streptococcus
agalactiae serotype III
Length = 639
Score = 40.7 bits (91), Expect = 0.039
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G I++IG+TT EF E DRAL RR Q + + EP+
Sbjct: 184 GDIQLIGATTLDEFHEYIETDRALERRMQPVMVEEPT 220
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+ + + I K Y H ++ + Y+ DR LPDKA D+IDEA A
Sbjct: 221 ISQAITIIEQAKVIYEKFHGIQISSDAVHQAIRLSVRYLTDRFLPDKAFDLIDEAATIAS 280
Query: 688 LMPVSK 705
+ SK
Sbjct: 281 VEGKSK 286
>UniRef50_Q8SQU0 Cluster: HSP 101 RELATED PROTEIN; n=1;
Encephalitozoon cuniculi|Rep: HSP 101 RELATED PROTEIN -
Encephalitozoon cuniculi
Length = 851
Score = 40.7 bits (91), Expect = 0.039
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
+E+++ + GLK + A+H V+ YI++R LPD AID++D A A
Sbjct: 330 IEDSITMLRGLKGRLEAYHGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVM 389
Query: 688 LMPVSKRKKTVN 723
+ S+ ++ +N
Sbjct: 390 IALESEPQEILN 401
Score = 38.7 bits (86), Expect = 0.16
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 395 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+G I+ IG+TT+ E+ E D A RRF ++ + EPS
Sbjct: 292 AGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPS 329
>UniRef50_Q8U3B2 Cluster: Cation efflux system protein; n=5;
cellular organisms|Rep: Cation efflux system protein -
Pyrococcus furiosus
Length = 295
Score = 40.3 bits (90), Expect = 0.052
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3
Query: 472 RQSTVFLENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVGEKPV-MTLH 296
R++ L+ E+L+ N +F E+KR + IP V+N HH H W VGEK V H
Sbjct: 189 REAYEILKESVEVLMEASPNL-DFN-EIKREI-ESIPGVKNAHHFHAWRVGEKEVHFECH 245
Query: 295 VQV 287
V+V
Sbjct: 246 VEV 248
>UniRef50_Q64UX7 Cluster: Endopeptidase Clp ATP-binding chain B;
n=2; Bacteroides fragilis|Rep: Endopeptidase Clp
ATP-binding chain B - Bacteroides fragilis
Length = 827
Score = 39.9 bits (89), Expect = 0.069
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 505
G I VIG TT E+ + E D AL RRF+ + ++EP
Sbjct: 313 GNITVIGVTTVDEYRKLIEPDHALNRRFEVLQVSEP 348
>UniRef50_A3USD8 Cluster: Chaperonin clpA/B/, ATPase; n=6;
Gammaproteobacteria|Rep: Chaperonin clpA/B/, ATPase -
Vibrio splendidus 12B01
Length = 871
Score = 39.5 bits (88), Expect = 0.091
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+ R + +TT+ E+ FE D AL RRFQ + + EP+
Sbjct: 325 GEFRSLAATTWAEYKQYFETDAALTRRFQVVAVGEPN 361
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 514 ETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
+ V + G+K HH+V+ Y+ +R LPDKAI ++D A +R L
Sbjct: 364 DAVHMLRGVKKSLEKHHNVKVMQEAIDAAVSLSIRYLPERQLPDKAISLLDTACSRIGL 422
>UniRef50_Q3JV76 Cluster: 200 kDa antigen p200, putative; n=9;
Burkholderiales|Rep: 200 kDa antigen p200, putative -
Burkholderia pseudomallei (strain 1710b)
Length = 1282
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = -1
Query: 738 LNIRHINGFLAFAYRHQACASARFVDNINGFIRQMTIVNVFHRQFYRRTHRFCGITHVVV 559
L++ + L +R A ARFVD+++ + QM + + RQF R R I V+
Sbjct: 823 LDLALADRLLLLGFRQHALRGARFVDHVDRLVGQMAVGDEPRRQFGGRRQRARRILDAVM 882
Query: 558 RLILRFQAIVDLNSFFD 508
L R QA D + D
Sbjct: 883 LLEARLQAAQDRDRLLD 899
>UniRef50_Q7RDQ7 Cluster: ClpB protein; n=8; Plasmodium|Rep: ClpB
protein - Plasmodium yoelii yoelii
Length = 909
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE ++I LK KY + + T +I DR LPDKAID++++A + +
Sbjct: 375 VETAIKILRSLKSKYEKFYGINITDKALVAAVKVSDKFIKDRFLPDKAIDLLNKACSFLQ 434
Query: 688 LMPVSKRKKTVNVAD--IESVVARIARFQR 771
+ +S + + +++ + IE + I+ +R
Sbjct: 435 VQ-LSGKPRVIDLTERYIERLAYEISTLER 463
Score = 36.7 bits (81), Expect = 0.64
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
K + G+I++IG+TT E+ E A RRF+K+ + PS + K
Sbjct: 332 KPVLSKGEIKLIGATTVTEYRKYIESCSAFERRFEKVIVEPPSVETAIK 380
>UniRef50_A0GKI9 Cluster: Putative uncharacterized protein; n=5;
Burkholderiales|Rep: Putative uncharacterized protein -
Burkholderia phytofirmans PsJN
Length = 913
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -1
Query: 669 FVDNINGFIRQMTIVNVFHRQFYRRTHRFCGITHVVVRLILRFQA 535
FVD ++ +RQ + +V RQF RR R G H V++L+L QA
Sbjct: 470 FVDQVDRLVRQEAVRDVAMRQFRRRDDRRVGDIHAVMQLVLFLQA 514
>UniRef50_Q4ECE6 Cluster: Cation efflux family protein; n=12;
Rickettsiales|Rep: Cation efflux family protein -
Wolbachia endosymbiont of Drosophila ananassae
Length = 322
Score = 37.5 bits (83), Expect = 0.37
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 394 ELKRLMCREIPEVRNVHHVHVWMVGEKP-VMTLHVQVIPPHDHDALL 257
E+K + E+PEV +VHH+H W + + ++T+H ++ H +L
Sbjct: 243 EIKSKITSELPEVIDVHHIHTWSLSDNYFIITMHAKIKQNVQHTNVL 289
>UniRef50_Q7MUS7 Cluster: Heavy metal efflux pump, CzcD family; n=1;
Porphyromonas gingivalis|Rep: Heavy metal efflux pump,
CzcD family - Porphyromonas gingivalis (Bacteroides
gingivalis)
Length = 321
Score = 36.7 bits (81), Expect = 0.64
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -3
Query: 367 IPEVRNVHHVHVWMV-GEKPVMTLHVQVIP 281
+P +R+VH +H+W + GE VMT+HV P
Sbjct: 248 LPHIRSVHDIHLWTLDGESHVMTIHVVYCP 277
>UniRef50_Q8ERA7 Cluster: Cation efflux system permease; n=14;
Bacillaceae|Rep: Cation efflux system permease -
Oceanobacillus iheyensis
Length = 300
Score = 36.3 bits (80), Expect = 0.85
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 394 ELKRLMCREIPEVRNVHHVHVWMV-GEKPVMTLHVQVIPPHDHDALLDRS 248
E+KR + + V++VH +HVW + E P M+ H+QV + D LL+ +
Sbjct: 221 EMKRSLL-SLSGVQDVHDLHVWSITSEFPSMSCHIQVTEQTNRDQLLEEA 269
>UniRef50_Q5NP70 Cluster: Cation efflux system protein; n=2;
Zymomonas mobilis|Rep: Cation efflux system protein -
Zymomonas mobilis
Length = 322
Score = 36.3 bits (80), Expect = 0.85
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 370 EIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPPHDHDALL 257
++P+V NVHHVH+W V + MT H+ ++DA +
Sbjct: 253 QLPDVINVHHVHIWPVSTSETAMTAHIVRSKIQNNDAFI 291
>UniRef50_Q9LXS1 Cluster: Metal tolerance protein A2; n=17;
rosids|Rep: Metal tolerance protein A2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 378
Score = 36.3 bits (80), Expect = 0.85
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
L N+ E+L+ + T L++ +C EI EV VH +H+W + K ++ HV++ P
Sbjct: 291 LRNILEVLMESTPREIDPTM-LEKGVC-EIEEVVAVHELHIWAITVGKLLLACHVKIRPE 348
Query: 277 HDHDALLDR 251
+ D +LD+
Sbjct: 349 AEADMVLDK 357
>UniRef50_Q8NPQ1 Cluster: ATPases with chaperone activity,
ATP-binding subunit; n=1; Corynebacterium
glutamicum|Rep: ATPases with chaperone activity,
ATP-binding subunit - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 655
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 502
G +RVIG+TT QE + F+ D AL RRF ++++ E
Sbjct: 225 GDLRVIGATTTQE-ARDFDHDPALKRRFSRVNVDE 258
>UniRef50_Q2GDZ9 Cluster: Putative ABC transporter,
ATP-binding/permease protein; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Putative ABC transporter,
ATP-binding/permease protein - Neorickettsia sennetsu
(strain Miyayama)
Length = 557
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 589 PLLRYNARRGALNTSVSGHC*-FEQFLRRRFSNINFLEATRQSTVFLENVAELLIGCRTN 413
PLL AR L++ +G F LR SNI +++ + T FLE + +L GC ++
Sbjct: 167 PLLLVGARARKLSSLFAGKTDNFHAELRENISNIQMIKSFLKETFFLERLQDLSKGCSSS 226
Query: 412 YTNF 401
+ +
Sbjct: 227 FVQY 230
>UniRef50_Q2NBG7 Cluster: Cation efflux system protein; n=3;
Proteobacteria|Rep: Cation efflux system protein -
Erythrobacter litoralis (strain HTCC2594)
Length = 317
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 469 QSTVFLENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVGE 317
Q L LL+G + F ++ L R + V+++HHVHVW +GE
Sbjct: 200 QGATLLPRTVRLLMGAVPDEVEFDQMVENL--RALGGVQDIHHVHVWNLGE 248
>UniRef50_Q1ZSN3 Cluster: Cation diffusion facilitator family
transporter; n=1; Vibrio angustum S14|Rep: Cation
diffusion facilitator family transporter - Vibrio
angustum S14
Length = 301
Score = 35.1 bits (77), Expect = 2.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -2
Query: 287 DPATRSRCLVGQIQHYLMDHYQIEHATIQME 195
D + + + +I+HY+ DH++IEH T+Q+E
Sbjct: 254 DEYDKGQGMPDEIKHYVHDHFEIEHVTVQIE 284
>UniRef50_A7BTF1 Cluster: ClpA/B-type chaperone; n=1; Beggiatoa sp.
PS|Rep: ClpA/B-type chaperone - Beggiatoa sp. PS
Length = 555
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSK 514
K +G++R I + T + FE + A R+FQKI I EPS +
Sbjct: 313 KQTLLNGELRTIVTITPSGYQKYFETEPAFIRQFQKIRIEEPSEE 357
>UniRef50_A0DIG5 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 343
Score = 34.7 bits (76), Expect = 2.6
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 326 HPYMYMVHIADFRDFPAHKTLQFSGKIRVIGSTTYQEFSNI--FEKDRALARRFQKID 493
+PY + V D R+ + T+ SG+ +I + ++EF +I FEKDR L R QKI+
Sbjct: 114 NPYEWKVVNYDDRNLDYYMTI--SGRGIIIHHSNFEEFVSIKQFEKDRKLFHRLQKIE 169
>UniRef50_Q5FM42 Cluster: Cation efflux protein; n=5;
Lactobacillus|Rep: Cation efflux protein - Lactobacillus
acidophilus
Length = 299
Score = 34.3 bits (75), Expect = 3.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 364 PEVRNVHHVHVWMVGEKPV-MTLHVQVIPPHDHDAL 260
P+V N+HHVHVW + + M H+ V P D L
Sbjct: 220 PKVTNIHHVHVWRYSDDFIMMDAHINVAPDMCADEL 255
>UniRef50_Q9ZT63 Cluster: Metal tolerance protein 1 (AtMTP1) (Zinc
transporter ZAT-1) (ZAT1p) [Contains: Metal tolerance
protein 1 short form]; n=31; Magnoliophyta|Rep: Metal
tolerance protein 1 (AtMTP1) (Zinc transporter ZAT-1)
(ZAT1p) [Contains: Metal tolerance protein 1 short form]
- Arabidopsis thaliana (Mouse-ear cress)
Length = 398
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
+ N+ E+L+ + T K L+ E+ EV VH +H+W + K ++ HV + P
Sbjct: 312 IRNILEVLMESTPREIDATKLEKGLL--EMEEVVAVHELHIWAITVGKVLLACHVNIRPE 369
Query: 277 HDHDALLDR 251
D D +L++
Sbjct: 370 ADADMVLNK 378
>UniRef50_Q7NRV3 Cluster: Probable cation efflux system; n=1;
Chromobacterium violaceum|Rep: Probable cation efflux
system - Chromobacterium violaceum
Length = 336
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 367 IPEVRNVHHVHVW-MVGEKPVMTLHVQVIPPHDHDALL 257
I VR+VH +HVW M E+ ++ HV++ P D +L
Sbjct: 256 IAGVRSVHDLHVWTMSAERVALSAHVRIAAPQDWPRIL 293
>UniRef50_Q03X61 Cluster: ATP-binding subunit of Clp protease and
DnaK/DnaJ chaperones; n=1; Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293|Rep: ATP-binding subunit
of Clp protease and DnaK/DnaJ chaperones - Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293
/NCDO 523)
Length = 632
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 404 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
+++IG+TT +EF +D AL RRF I++ E S
Sbjct: 161 LQIIGATTTKEFHEYVARDGALMRRFDLIEVPELS 195
>UniRef50_A5G751 Cluster: Cation diffusion facilitator family
transporter; n=1; Geobacter uraniumreducens Rf4|Rep:
Cation diffusion facilitator family transporter -
Geobacter uraniumreducens Rf4
Length = 293
Score = 33.9 bits (74), Expect = 4.5
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -3
Query: 400 TAELKRLMCREIPEVRNVHHVHVWMV-GEKPVMTLHVQV 287
T E+++ + I +V++VHH HVW + GE V+T H+ V
Sbjct: 212 TGEIEKKLLA-IDKVKSVHHTHVWSLDGEHNVLTTHLVV 249
>UniRef50_Q0E0M6 Cluster: Os02g0537400 protein; n=3; Oryza
sativa|Rep: Os02g0537400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 438
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 619 YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 741
YI R PDKAID+IDEA + RL S +K VN +++
Sbjct: 15 YITGRQFPDKAIDLIDEACSTVRLKIDS--QKGVNTTGMQN 53
>UniRef50_Q54QU8 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Dictyostelium discoideum AX4
Length = 543
Score = 33.9 bits (74), Expect = 4.5
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 370 EIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPPHDHDALLDRSN 245
EI V VH +H+W + +P +++H+ ++P D + +L +N
Sbjct: 450 EIEGVTEVHDLHIWSITLGRPALSVHLTILPTIDPEEILSIAN 492
>UniRef50_A4QRA6 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 532
Score = 33.9 bits (74), Expect = 4.5
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -3
Query: 373 REIPEVRNVHHVHVWMVGE-KPVMTLHVQVIPP 278
+++P V + HHVH+W + + K V ++H+QV P
Sbjct: 390 QDLPGVVSCHHVHIWQLSDTKLVASMHIQVSFP 422
>UniRef50_A6Q136 Cluster: Cation efflux system protein, CDF family;
n=2; unclassified Epsilonproteobacteria|Rep: Cation
efflux system protein, CDF family - Nitratiruptor sp.
(strain SB155-2)
Length = 301
Score = 33.5 bits (73), Expect = 6.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -3
Query: 373 REIPEVRNVHHVHVWMVGEKPV 308
++I +V N+HH+H+W +GE +
Sbjct: 221 KKIEKVENIHHIHIWRLGEHDI 242
>UniRef50_Q5BCD5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 500
Score = 33.5 bits (73), Expect = 6.0
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -3
Query: 367 IPEVRNVHHVHVWMVGE-KPVMTLHVQV 287
+P V+ HH+HVW + + K V ++H+QV
Sbjct: 382 LPGVKGSHHLHVWQLSDTKTVASIHIQV 409
>UniRef50_Q2HFW8 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 553
Score = 33.5 bits (73), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 367 IPEVRNVHHVHVWMVGE-KPVMTLHVQVIPP 278
+P V + HHVH+W + + K V ++H+QV P
Sbjct: 407 LPGVISCHHVHIWQLSDTKVVASMHIQVAFP 437
>UniRef50_UPI00015B56B9 Cluster: PREDICTED: similar to GM05135p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GM05135p - Nasonia vitripennis
Length = 244
Score = 33.1 bits (72), Expect = 7.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 104 AHARCPINGDDVNGQTPLHSGGSLAHDKV 190
AHA +N D +GQTPLH S H ++
Sbjct: 184 AHAGSDVNAKDEDGQTPLHYAASCGHKEI 212
>UniRef50_Q9PF12 Cluster: Cobalt-zinc-cadmium resistance protein;
n=26; Proteobacteria|Rep: Cobalt-zinc-cadmium resistance
protein - Xylella fastidiosa
Length = 321
Score = 33.1 bits (72), Expect = 7.9
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -3
Query: 364 PEVRNVHHVHVWMVGEK-PVMTLHV 293
P V NVH VH+W +G + P++T HV
Sbjct: 250 PGVANVHDVHLWALGSRMPLLTAHV 274
>UniRef50_A4VE48 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 307
Score = 33.1 bits (72), Expect = 7.9
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 287 HLHMQRHHRLLAYHPYMYMVHIA 355
HLH+ RHHRLL +H Y +++H++
Sbjct: 43 HLHL-RHHRLLHHHRYHHLLHLS 64
>UniRef50_A7I6Y5 Cluster: Cation diffusion facilitator family
transporter; n=1; Candidatus Methanoregula boonei
6A8|Rep: Cation diffusion facilitator family transporter
- Methanoregula boonei (strain 6A8)
Length = 317
Score = 33.1 bits (72), Expect = 7.9
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -2
Query: 296 CAGDPATRSRCLVGQIQHYLMDHYQIEHATIQMEYQPCHGPDCHL 162
C DP TR + + +I+H L +H++I H+T++ E + C DC +
Sbjct: 261 CENDPETREQ-IKEEIKHRL-EHFRIGHSTLEFECREC--SDCRV 301
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,414,397
Number of Sequences: 1657284
Number of extensions: 18552570
Number of successful extensions: 50715
Number of sequences better than 10.0: 173
Number of HSP's better than 10.0 without gapping: 47760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50686
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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