Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0749.Seq
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.51 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 394 QR*NSCNWFDNLSGVQQH 447
           +R +SC+W +N+ G Q+H
Sbjct: 136 ERTHSCDWPENVDGCQKH 153


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 403  NSCNWFDNLSGVQQHFRERP 462
            N C+W +N+ G  QH    P
Sbjct: 958  NVCDWPENVEGCMQHTAAPP 977


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = -2

Query: 389 EASYVPGNPGSPQCAPCTCMDGRREAGDDVACAGD 285
           +ASYVP NP       C    G        AC  D
Sbjct: 2   DASYVPNNPQFGLQLECNWSSGPNATLQSSACTDD 36


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 210 HHSDGISTLSWARLPPE*RGVWPFTSSPLMGQRA*ASFTCAVDPHPAAVER 58
           HH   I  ++   LPP+     P  SSP++ ++   S T    P P   ER
Sbjct: 61  HHKAPIRPVA---LPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEER 108


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 282 GITCTCNVITGFSPTIHTCTWCTLRTSGIS 371
           G+T      TGFSP  ++  W  L T G++
Sbjct: 17  GLTPVSVEPTGFSPKGYSLLWILLFTLGVT 46


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 738 VRGGPYCTLP 767
           ++G PYC+LP
Sbjct: 477 IKGQPYCSLP 486


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 738 VRGGPYCTLP 767
           ++G PYC+LP
Sbjct: 484 IKGQPYCSLP 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,858
Number of Sequences: 336
Number of extensions: 4680
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)