Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0749.Seq
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY212919-1|AAP44332.1|  496|Homo sapiens zinc transporter 8 prot...    31   4.6  
AL359609-1|CAB94880.1|  240|Homo sapiens hypothetical protein pr...    31   4.6  
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           31   6.1  
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.        31   6.1  
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.                31   6.1  

>AY212919-1|AAP44332.1|  496|Homo sapiens zinc transporter 8
           protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -3

Query: 367 IPEVRNVHHVHVW-MVGEKPVMTLHVQ 290
           +P + +VH VH+W +V  K + TLH++
Sbjct: 326 VPGISSVHEVHIWELVSGKIIATLHIK 352


>AL359609-1|CAB94880.1|  240|Homo sapiens hypothetical protein
           protein.
          Length = 240

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -3

Query: 367 IPEVRNVHHVHVW-MVGEKPVMTLHVQ 290
           +P + +VH VH+W +V  K + TLH++
Sbjct: 81  VPGISSVHEVHIWELVSGKIIATLHIK 107


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -2

Query: 356 PQCAPCTCMDGRREAGDDVACAGDPATRSRCLVGQIQ 246
           P C  CT      E G +    GDP    RCL G IQ
Sbjct: 246 PTCQGCTEGGSHWEHGQEWTTPGDPCRICRCLEGHIQ 282


>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
          Length = 1373

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 386 ASYVPGNPGSPQCAPCTCMDGRREAGDDVACAG 288
           A+Y PG   S  C  CTC  GR     +V C G
Sbjct: 403 AAYAPGATYSTDCTNCTCSGGRWSC-QEVPCPG 434


>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
          Length = 1104

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 386 ASYVPGNPGSPQCAPCTCMDGRREAGDDVACAG 288
           A+Y PG   S  C  CTC  GR     +V C G
Sbjct: 401 AAYAPGATYSTDCTNCTCSGGRWSC-QEVPCPG 432


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,128,422
Number of Sequences: 237096
Number of extensions: 2881958
Number of successful extensions: 7048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7040
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)