Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0749.Seq
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p pro...    30   3.1  
AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB...    30   3.1  
AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA...    30   3.1  
AE014134-2672|AAF53503.2|  248|Drosophila melanogaster CG4959-PB...    29   5.4  
AY059442-1|AAL13348.1|  269|Drosophila melanogaster GH09250p pro...    29   9.4  
AE013599-3139|AAM70855.2|  488|Drosophila melanogaster CG9415-PB...    29   9.4  

>AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 388 KRLMCREIPEVRNVHHVHVW-MVGEKPVMTLHVQVIPP 278
           +R +  + PE+ + H +H+W +   + V T+H+Q   P
Sbjct: 319 ERTLVTKFPEIISYHDLHIWQLAAHRYVATIHIQFQNP 356


>AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB,
           isoform B protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 388 KRLMCREIPEVRNVHHVHVW-MVGEKPVMTLHVQVIPP 278
           +R +  + PE+ + H +H+W +   + V T+H+Q   P
Sbjct: 319 ERTLVTKFPEIISYHDLHIWQLAAHRYVATIHIQFQNP 356


>AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA,
           isoform A protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 388 KRLMCREIPEVRNVHHVHVW-MVGEKPVMTLHVQVIPP 278
           +R +  + PE+ + H +H+W +   + V T+H+Q   P
Sbjct: 319 ERTLVTKFPEIISYHDLHIWQLAAHRYVATIHIQFQNP 356


>AE014134-2672|AAF53503.2|  248|Drosophila melanogaster CG4959-PB
           protein.
          Length = 248

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -2

Query: 353 QCAPCTCMDGRREAGDDVACAGDPATRSRCLVGQIQHYLMDHYQIEHATIQM 198
           +CA C  +   R A  D AC+ DP   S  +       L+ H    HAT +M
Sbjct: 164 ECARCPALAVDRLADWDPACSADPTMASGSVRSTTVAVLVAHMVAAHATGRM 215


>AY059442-1|AAL13348.1|  269|Drosophila melanogaster GH09250p
           protein.
          Length = 269

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 274 RVAGSPAHATSSPASRLPSIHVHGAHCGLPGFPGT 378
           ++ G+P H T++PASR  +I    A   L   P T
Sbjct: 91  KINGNPQHTTAAPASRTATITATAAASQLQATPDT 125


>AE013599-3139|AAM70855.2|  488|Drosophila melanogaster CG9415-PB,
           isoform B protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 274 RVAGSPAHATSSPASRLPSIHVHGAHCGLPGFPGT 378
           ++ G+P H T++PASR  +I    A   L   P T
Sbjct: 310 KINGNPQHTTAAPASRTATITATAAASQLQATPDT 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,676,427
Number of Sequences: 53049
Number of extensions: 911160
Number of successful extensions: 2495
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2494
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)