Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0749.Seq
(774 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 68 6e-12
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 67 1e-11
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 67 1e-11
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 57 1e-08
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 57 1e-08
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 56 3e-08
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 50 1e-06
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 36 0.023
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 36 0.023
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 34 0.091
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 34 0.091
At3g61940.1 68416.m06956 zinc transporter, putative similar to z... 33 0.21
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 30 2.0
At4g03490.1 68417.m00476 ankyrin repeat family protein contains ... 29 2.6
At4g03500.1 68417.m00477 ankyrin repeat family protein contains ... 29 4.5
At4g03460.1 68417.m00473 ankyrin repeat family protein contains ... 28 7.9
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V+ET+QI GL+ +Y HH +RYT YI+DR LPDKAID+IDEAG+R R
Sbjct: 438 VDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVR 497
Query: 688 L 690
L
Sbjct: 498 L 498
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ + + EP+
Sbjct: 401 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT 437
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VEE +QI GL+ +Y HH +RYT YI+DR LPDKAID+IDEAG+R R
Sbjct: 459 VEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVR 518
Query: 688 L 690
L
Sbjct: 519 L 519
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G+++ IG+TT E+ EKD AL RRFQ + + EP+
Sbjct: 422 GELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPT 458
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 511 EETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARARL 690
E+ V+I GL+ KY AHH+ +YT YI DR LPDKAID+IDEAG+RAR+
Sbjct: 458 EDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARI 517
Query: 691 MPVSKRKK 714
K+K+
Sbjct: 518 EAFRKKKE 525
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKLFK 526
G+++ I STT EF + FEKD+ALARRFQ + I EPS + K
Sbjct: 420 GELQCIASTTLDEFRSQFEKDKALARRFQPVLINEPSEEDAVK 462
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +T+ I GLK KY HH VR YI RHLPDKAID++DEA A R
Sbjct: 344 VPDTISILRGLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVR 403
Query: 688 LMPVSKRKKTVNV 726
+ S+ ++ N+
Sbjct: 404 VQLDSQPEEIDNL 416
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT +E+ EKD A RRFQ++ + EPS
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPS 343
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ +Y HH V + YI +R LPDKAID++DEAGA+ +
Sbjct: 424 VEDTISILRGLRERYELHHGVTISDSALVSAAVLADRYITERFLPDKAIDLVDEAGAKLK 483
Query: 688 LMPVSK 705
+ SK
Sbjct: 484 MEITSK 489
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R IG+TT E+ EKD AL RRFQ++ +PS
Sbjct: 387 GELRCIGATTLTEYRKYIEKDPALERRFQQVLCVQPS 423
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
VE+T+ I GL+ +Y HH VR + YI+ R LPDKAID++DEA A+ +
Sbjct: 419 VEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLK 478
Query: 688 LMPVSK 705
+ SK
Sbjct: 479 MEITSK 484
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 398 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
G++R IG+TT E+ EKD AL RRFQ++ + +P+
Sbjct: 382 GELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPT 418
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 508 VEETVQINNGLKPKY*AHHDVRYTXXXXXXXXXXXXXYINDRHLPDKAIDVIDEAGARAR 687
V +T+ I GLK KY HH VR YI R LPDKAID++DE+ A +
Sbjct: 309 VPDTISILRGLKEKYEGHHGVRIQDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVK 368
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 380 KTLQFSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 508
K + G++R IG+TT +E+ EKD A RRFQ++ + EPS
Sbjct: 266 KPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPS 308
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
L N+ E+L+ + T L++ +C EI EV VH +H+W + K ++ HV++ P
Sbjct: 306 LRNILEVLMESTPREIDPTM-LEKGVC-EIEEVVAVHELHIWAITVGKLLLACHVKIRPE 363
Query: 277 HDHDALLDR 251
+ D +LD+
Sbjct: 364 AEADMVLDK 372
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
L N+ E+L+ + T L++ +C EI EV VH +H+W + K ++ HV++ P
Sbjct: 345 LRNILEVLMESTPREIDPTM-LEKGVC-EIEEVVAVHELHIWAITVGKLLLACHVKIRPE 402
Query: 277 HDHDALLDR 251
+ D +LD+
Sbjct: 403 AEADMVLDK 411
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
+ N+ E+L+ + T K L+ E+ EV VH +H+W + K ++ HV + P
Sbjct: 312 IRNILEVLMESTPREIDATKLEKGLL--EMEEVVAVHELHIWAITVGKVLLACHVNIRPE 369
Query: 277 HDHDALLDR 251
D D +L++
Sbjct: 370 ADADMVLNK 378
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 454 LENVAELLIGCRTNYTNFTAELKRLMCREIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPP 278
+ N+ E+L+ + T K L+ E+ EV VH +H+W + K ++ HV + P
Sbjct: 312 IRNILEVLMESTPREIDATKLEKGLL--EMEEVVAVHELHIWAITVGKVLLACHVNIRPE 369
Query: 277 HDHDALLDR 251
D D +L++
Sbjct: 370 ADADMVLNK 378
>At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 334
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 370 EIPEVRNVHHVHVWMVG-EKPVMTLHVQVIPPHDHDALLDRSNTT*WITIRLS 215
EI EV +VH +H+W + K + + HV+V P + +L++ W R+S
Sbjct: 274 EIEEVVDVHELHIWAITVGKALFSCHVKVRPEAGDEMVLNKVIDYIWREYRIS 326
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 392 FSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSSKKL 520
FSGK + Y+E + ++D L+RR +D E S KL
Sbjct: 121 FSGKAASVPPVKYEEQGIVVDEDEVLSRRRSGLDDLESVSSKL 163
>At4g03490.1 68417.m00476 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 587
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 122 INGDDVNGQTPLHSGGSLAHDKV 190
IN D+ G TPLH S +H KV
Sbjct: 289 INEQDIEGNTPLHLASSNSHPKV 311
>At4g03500.1 68417.m00477 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 652
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 98 KEAHARCPINGDDVNGQTPLHSGGSLAHDKVDIPSEW 208
K+ + + IN DVNG TPLH H KV W
Sbjct: 372 KDKNKKKLINEQDVNGNTPLHLATINWHPKVVSMFTW 408
>At4g03460.1 68417.m00473 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 677
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 122 INGDDVNGQTPLHSGGSLAHDKVDIPSEW 208
IN +D NG TPLH H KV W
Sbjct: 416 INEEDANGNTPLHLATKNWHPKVVSMLTW 444
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,169,890
Number of Sequences: 28952
Number of extensions: 403028
Number of successful extensions: 999
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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