Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0748.Seq
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    42   3e-06
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    42   3e-06
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    39   3e-05
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 42.3 bits (95), Expect = 3e-06
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 580 INEPTAGAIAYGVDKKGNGERNVL 651
           INEPTA AIAYG+DKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVL 24


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 42.3 bits (95), Expect = 3e-06
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 580 INEPTAGAIAYGVDKKGNGERNVL 651
           INEPTA AIAYG+DKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVL 24


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 580 INEPTAGAIAYGVDKKGNGERNVL 651
           INEPTA AIAYG+DKKG  E+N+L
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNIL 23


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 375  LILGLPPSLTTWK 337
            L +GLPP + TWK
Sbjct: 1329 LAVGLPPPVITWK 1341


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 353 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 478
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 125 LPAREGGDHRQRPGQQDH 178
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 535 TKDAGTISGLNVLRIINEP 591
           TKDAG +S   +  ++N+P
Sbjct: 330 TKDAGLLSYPEICTLLNDP 348


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +1

Query: 457 RSLSRQNCAECSYHGSRDFN 516
           RS   Q C  C YH   + N
Sbjct: 29  RSTISQGCKACGYHSPLESN 48


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 124 TPTQEYVVPRSIPT 83
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,508
Number of Sequences: 336
Number of extensions: 3980
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)