Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0748.Seq
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 140 7e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 138 5e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 2e-26
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 4e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 2e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.82
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 31 0.82
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 1.1
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.5
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.4
SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.6
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 140 bits (340), Expect = 7e-34
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFHVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGRKF+D V DM HWPFHV+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VLTKMKETAEAYLG V +AV+TVPA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 132 bits (318), Expect = 3e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 246 MNP 254
MNP
Sbjct: 61 MNP 63
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKKGNGERNVL 651
F+DSQRQATKDAGTI+GLNVLRIINEPTA AIAYG+DKK ERNVL
Sbjct: 150 FHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVL 196
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 138 bits (333), Expect = 5e-33
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFHVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NTIFDAKRLIGR+++DATVQ+DMK WPF ++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKETAEAYLG+ V +AVITVPA
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 127 bits (306), Expect = 9e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 246 MNP 254
+NP
Sbjct: 61 LNP 63
Score = 84.2 bits (199), Expect = 8e-17
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKKGNGERNVL 651
FNDSQRQATKDAGTI+GLNVLR+INEPTA A+AYG+DK +GE+NVL
Sbjct: 150 FNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVL 196
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 2e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 246 MNPT 257
MNPT
Sbjct: 61 MNPT 64
Score = 111 bits (268), Expect = 4e-25
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFHVVSDGGKPKIKVAYKGEDKTFFPEEV--- 421
P NTIFDAKRLIGR+F+D V+ DMKHW F VV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 422 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPA 508
SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/47 (87%), Positives = 42/47 (89%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKKGNGERNVL 651
FNDSQRQATKDAG ISGLNVLRIINEPTA AIAYG+DKK ERNVL
Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVL 289
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 416 EVSSMVLTKMKETAEAYLGKTVQNAVITVPA 508
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAG 549
FNDSQRQATKDAG
Sbjct: 175 FNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (279), Expect = 2e-26
Identities = 55/86 (63%), Positives = 67/86 (77%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFHVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGR ++D +VQ D+K +PF VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VLTKMKETAEAYLGK V +AV+TVPA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKKGNGERNVL 651
FND+QRQATKDAG I+GL V+RIINEPTA AIAYG+DKK GE+N+L
Sbjct: 848 FNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNIL 893
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFHVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 433
NTI KR IGRKF D VQ ++ H P+ VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
T++K TAE L V + VI+VP+
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVPS 205
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 239
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKK 627
+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 207 YTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 246 MNP 254
+NP
Sbjct: 90 INP 92
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFHVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 427
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 428 MVLTKMKETAEAYLGKTVQNAVITVPA 508
V+ K++ AE L TV AV++VPA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA 178
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1
Query: 508 DFNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGVDKKGNGERNVL 651
+F+ QR AT A +++G+ VLR+INEPTA A+AYG+ KK G NV+
Sbjct: 179 EFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVM 225
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 26/71 (36%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLN------------------------VLRIINEPTAGAIAYGV 618
FND+QRQATKDAGTI+GL+ VLRIINEPTA AIAYG+
Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108
Query: 619 DKK--GNGERN 645
DK G ERN
Sbjct: 109 DKARGGKAERN 119
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 371 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 135 GKVEIIANDQGNRTTPSYVAFTDTERLI 218
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAGAIAYGV 618
FN ++R+A A + GLNVL+I+N TA A+ YG+
Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 365 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 505
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 144 EIIANDQGNRTTPSYVAFT-DTERL 215
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -2
Query: 613 RKQSHQQWVH**SGERSTLRWYLHLLWLVFESH*SRGNRDNCILHSFAEIS 461
RK ++++ +H T + ++ LWL F + S + D C+LHS A ++
Sbjct: 397 RKDNYEKEIH----RLITAKDVIYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 465 ISAKLCRM-QLSRFPRLQ*LSKTSHKR-CRYHLRVERSPDH 581
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 465 ISAKLCRM-QLSRFPRLQ*LSKTSHKR-CRYHLRVERSPDH 581
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 362 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPATSMTLKDKPQK 541
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 542 MQ 547
Q
Sbjct: 714 SQ 715
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 459 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTWKGQCFMSACTVASSNLRPMR 280
S F+F ST + +S +KV+ SPL + + P+ + G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 279 RLASNIVL 256
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 53 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 229
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 230 QEPGGDEPHNTIFDA 274
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 252 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 154
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 409 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSRDFN 516
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 12 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 98
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 641 RSPLPFLSTP*AIAPAVGSLMIRRTFNPEMVPASFVACL 525
RS F T + P VG+L IR F+PE S ++C+
Sbjct: 397 RSTKCFGYTNNILGPLVGALFIREAFSPESKHKSGMSCM 435
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 94 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 237
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 94 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 237
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +3
Query: 105 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 284
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 285 SDVSSKMLLCKP 320
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,276,660
Number of Sequences: 59808
Number of extensions: 562411
Number of successful extensions: 1841
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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