Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0746.Seq
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111064-1|AAI11065.1|  349|Homo sapiens chromosome 1 open readi...    30   8.9  
AY358750-1|AAQ89110.1|  348|Homo sapiens AGPA3119 protein.             30   8.9  
AL953897-9|CAI15884.1|  349|Homo sapiens novel protein protein.        30   8.9  
AL031731-14|CAI20222.1|  349|Homo sapiens novel protein protein.       30   8.9  
AK075558-1|BAC11697.1|  349|Homo sapiens protein ( Homo sapiens ...    30   8.9  

>BC111064-1|AAI11065.1|  349|Homo sapiens chromosome 1 open reading
           frame 187 protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 525 ARQRPAHRSYYASPGNE*LPLCPSYTCSFQSELSFEFCDLRQSLCT 662
           A+++  HR   +S GNE  P         Q  L    CDLR+ LCT
Sbjct: 249 AKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCT 294


>AY358750-1|AAQ89110.1|  348|Homo sapiens AGPA3119 protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 525 ARQRPAHRSYYASPGNE*LPLCPSYTCSFQSELSFEFCDLRQSLCT 662
           A+++  HR   +S GNE  P         Q  L    CDLR+ LCT
Sbjct: 248 AKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCT 293


>AL953897-9|CAI15884.1|  349|Homo sapiens novel protein protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 525 ARQRPAHRSYYASPGNE*LPLCPSYTCSFQSELSFEFCDLRQSLCT 662
           A+++  HR   +S GNE  P         Q  L    CDLR+ LCT
Sbjct: 249 AKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCT 294


>AL031731-14|CAI20222.1|  349|Homo sapiens novel protein protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 525 ARQRPAHRSYYASPGNE*LPLCPSYTCSFQSELSFEFCDLRQSLCT 662
           A+++  HR   +S GNE  P         Q  L    CDLR+ LCT
Sbjct: 249 AKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCT 294


>AK075558-1|BAC11697.1|  349|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0258 fis, clone NT2RP3003731. ).
          Length = 349

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 525 ARQRPAHRSYYASPGNE*LPLCPSYTCSFQSELSFEFCDLRQSLCT 662
           A+++  HR   +S GNE  P         Q  L    CDLR+ LCT
Sbjct: 249 AKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCT 294


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,344,713
Number of Sequences: 237096
Number of extensions: 2195716
Number of successful extensions: 3944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3944
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)