Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0746.Seq
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 30 1.8
U80444-1|AAB37787.2| 383|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 28 5.4
AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical ... 28 5.4
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 28 7.2
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 27 9.5
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 27 9.5
U88178-3|AAC24414.1| 305|Caenorhabditis elegans Yeast glc seven... 27 9.5
L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical p... 27 9.5
AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein. 27 9.5
>Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical
protein F49E11.7 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 355 GFDNKKDLLISVGDLVDRGNENVECLELI 269
GF N + + +GD VDRG+ ++EC+ L+
Sbjct: 111 GFCNSR--FVFLGDYVDRGHHSIECISLV 137
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 355 GFDNKKDLLISVGDLVDRGNENVECLELI 269
GF N + + +GD VDRG+ ++EC+ L+
Sbjct: 92 GFCNNR--FVFLGDYVDRGSHSIECISLM 118
>U80444-1|AAB37787.2| 383|Caenorhabditis elegans Hypothetical
protein F26B1.5 protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 328 ISVGDLVDRGNENVECLELI 269
+ +GD VDRGN ++EC+ L+
Sbjct: 100 VFLGDYVDRGNHSIECICLV 119
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.4
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = -1
Query: 460 VIEGKVWRTVYYRFATR--EER-EGKMSTN---LMNKLDTIGFDNKKD---LLISVGDLV 308
+IE +VW YR + EER E K + + +++KL T D + LL +VGDL
Sbjct: 166 IIEIQVWDASLYRMRAKCLEERGELKKAIHDMRIVSKLSTDSTDTMFETSKLLYTVGDLE 225
Query: 307 DRGNENVECLEL 272
+ N ECL+L
Sbjct: 226 ESLNVIRECLKL 237
>AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical
protein F53C3.4 protein.
Length = 224
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 291 FSLPRSTKSPTEISRSFLLSNPIVSSLFIRFVLIFPSR 404
F+LPRST E++ S + V++LF + V IF SR
Sbjct: 180 FNLPRSTPEVQELTPSAPNATNKVTTLFKKVVSIFSSR 217
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 371 VHQVRAHLSFPFFPGSKPVIHRSPDLTFDNQKTCPCHFSRGLIYA 505
V +V H +P K V++R+P F CP H G+ ++
Sbjct: 295 VTKVWPHGDYPLIEVGKMVLNRNPRNYFAESAFCPAHIVPGIEFS 339
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 222 HHLLMVSTYSSNQGNVINSRHSTFSLPRSTKSPTEISRSFLL 347
HHLL+ + + N HST S PRST S + S L
Sbjct: 12 HHLLLAN---KKRSNTTTCAHSTSSTPRSTYSSGSATSSLPL 50
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 222 HHLLMVSTYSSNQGNVINSRHSTFSLPRSTKSPTEISRSFLL 347
HHLL+ + + N HST S PRST S + S L
Sbjct: 12 HHLLLAN---KKRSNTTTCAHSTSSTPRSTYSSGSATSSLPL 50
>U88178-3|AAC24414.1| 305|Caenorhabditis elegans Yeast glc
seven-like phosphatasesprotein 3 protein.
Length = 305
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 385 TNLMNKLDTIGFDNKKDLLISVGDLVDRGNENVE--CLEL 272
++L+ D GF + L +GD VDRG +N+E CL L
Sbjct: 68 SDLLRIFDKNGFPPDVNFLF-LGDYVDRGRQNIETICLML 106
>L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical
protein F44B9.9 protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 355 GFDNKKDLLISVGDLVDRGNENVECLELI 269
GF KK + +GD VDRG ++++C+ L+
Sbjct: 66 GFSTKK--WVFLGDYVDRGYKSLDCICLV 92
>AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein.
Length = 594
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 222 HHLLMVSTYSSNQGNVINSRHSTFSLPRSTKSPTEISRSFLL 347
HHLL+ + + N HST S PRST S + S L
Sbjct: 12 HHLLLAN---KKRSNTTTCAHSTSSTPRSTYSSGSATSSLPL 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,439
Number of Sequences: 27780
Number of extensions: 340146
Number of successful extensions: 922
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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