Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0746.Seq
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23770.1 68415.m02839 protein kinase family protein / peptido... 34 0.10
At3g27010.1 68416.m03379 TCP family transcription factor, putati... 30 1.3
At5g35960.1 68418.m04330 protein kinase, putative contains prote... 29 2.2
At4g21230.1 68417.m03070 protein kinase family protein contains ... 29 2.2
At5g62910.1 68418.m07894 expressed protein predicted proteins, A... 29 2.9
At3g48070.1 68416.m05241 expressed protein 29 2.9
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 29 2.9
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 29 3.8
At4g09190.1 68417.m01520 F-box family protein contains Pfam PF00... 28 5.0
At3g13900.1 68416.m01756 haloacid dehalogenase-like hydrolase fa... 28 5.0
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 28 6.7
At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase fa... 28 6.7
At5g37660.1 68418.m04535 receptor-like protein kinase-related si... 27 8.8
At3g55910.1 68416.m06213 expressed protein PA26, p53 regulated P... 27 8.8
At1g69545.1 68414.m07997 leucine-rich repeat family protein cont... 27 8.8
At1g07010.1 68414.m00746 calcineurin-like phosphoesterase family... 27 8.8
>At2g23770.1 68415.m02839 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
contains Pfam domains, PF00069: Protein kinase domain
and PF01476: LysM domain
Length = 612
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 120 SFSQNFFVVIEIKEPATAIKQPVINVSTL**AINHHLLMVSTYSSNQGNVINSRHSTFSL 299
SF F+++ + ATA +QP + +ST +++ + V YS N N + F
Sbjct: 5 SFHLLVFILLSLSSFATA-QQPYVGISTTDCSVSDNTTSVFGYSCNGLNKTCQAYVIFRS 63
Query: 300 PRSTKSPTEISRSFLLSNPIVSSL 371
S + T IS F + +VSSL
Sbjct: 64 TPSFSTVTSISSLFSVDPSLVSSL 87
>At3g27010.1 68416.m03379 TCP family transcription factor, putative
similar to PCF2 [(GI:2580440) Oryza sativa]
Length = 314
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 281 PGINHIPLVRAVRGNHEQM--MIDGLSERGNV 192
PG+ H+ + GNH QM + GLS+ GNV
Sbjct: 231 PGVGHMSFASILGGNHNQMPGLELGLSQEGNV 262
>At5g35960.1 68418.m04330 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 429
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 284 MPGINHIPLVRAVRGNHEQMMIDGLSERGNVNH 186
+P + + R +RGN E++++D LSE G + H
Sbjct: 153 LPNGQMVAIKRLMRGNSEEIIVDFLSEMGIMAH 185
>At4g21230.1 68417.m03070 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 642
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = -1
Query: 547 LCAGRCRANRRNSTSINQAAAKMARAGLLVIEGKVW-RTVYYRFATR------EEREGKM 389
LC G + N+ + I AA ++ + +IE +W +R+ +R E
Sbjct: 82 LCRGDVKPNQDCISCITTAAKQLVESCPNIIEANIWLEKCMFRYTSRIILGQMEPVPFSY 141
Query: 388 STNLMNKLDTIGFD-NKKDLLISVGDLVDRGNENVE 284
+++ ++ D GF DLL S+G +D NE E
Sbjct: 142 TSSNVSVTDKEGFSKGLGDLLDSLGAKIDAANETKE 177
>At5g62910.1 68418.m07894 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 327
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 410 PGSKPVIHRSPDLTFDNQKTCPCHFSRGLIYAGTVAPVSAATSGAQK 550
P S P+ + DLT N CPC F L T+ G +K
Sbjct: 249 PSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRK 295
>At3g48070.1 68416.m05241 expressed protein
Length = 319
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 410 PGSKPVIHRSPDLTFDNQKTCPCHFSRGLIYAGTVAPVSAATSGAQK 550
P S P+ + DLT N CPC F L T+ G +K
Sbjct: 241 PSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRK 287
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding
transcription factor (CCAAT-binding factor) (CBF)
(Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus
musculus]
Length = 1056
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -1
Query: 457 IEGKVWRTVYYRFATREEREGKMSTNLMNKL 365
++ K +T+Y+ ++ E+E K+ +L+NKL
Sbjct: 336 LKDKALKTIYFMLTSKSEQERKLLVSLVNKL 366
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 505 SINQAAAKMARAGL--LVIEGKVWRTVY-YRFATREEREGKMSTNLMNKLDTIGFDNKK 338
S+N+A + R+ + LVIE T + A R EREGK ++NK DTI N++
Sbjct: 444 SVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVVVNKWDTIPNKNQE 502
>At4g09190.1 68417.m01520 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain; similar to Probable
disease resistance RPP8-like protein 2
(Swiss-Prot:Q9MAG6) [Arabidopsis thaliana]
Length = 383
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = -1
Query: 475 RAGLLVIEGKV---WRTVYY----RFATREEREGKMSTNLMNKLDTIGFDNKKDLLI 326
RA +L +EG+V W + Y R + R G ++ + + +LD +G+D KDL +
Sbjct: 320 RAYVLNVEGRVLYQWFRILYVDPKRNSMRVVMHGGIAVDDIRRLDEVGYDLMKDLTV 376
>At3g13900.1 68416.m01756 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0], Mus musculus [SP|P70704]; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1243
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 261 GNVINSRHSTFSLPRSTKSPTEISRSFLLSNPIVSSLFIRFVLI 392
G V+ + H T + STKSP++ SR + I+ +LF VL+
Sbjct: 273 GVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLVLV 316
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +2
Query: 299 TTINQIAHRDKQVF-FVVESNRIQFVHQVRAHLS----FPFFPGSKPVIHRSPDLTFDNQ 463
T++N+I+ R Q+ +ES+ QF + A L+ F GS+ S L+ ++
Sbjct: 191 TSLNEISSRSHQILRLTIESSSQQFSPESSATLAASVCFVDLAGSE---RASQTLSAGSR 247
Query: 464 KTCPCHFSRGLIYAGTV 514
CH +R L+ GTV
Sbjct: 248 LKEGCHINRSLLTLGTV 264
>At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|O43520], Mus musculus [SP|P70704]; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1218
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 261 GNVINSRHSTFSLPRSTKSPTEISRSFLLSNPIVSSLFIRFVLI 392
G V+ + H T + STKSP++ SR + I+ +L + +LI
Sbjct: 273 GVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLILI 316
>At5g37660.1 68418.m04535 receptor-like protein kinase-related
similar to receptor-like protein kinase 4 (GI:13506745)
{Arabidopsis thaliana}; embryonic abundant protein
EMB24, white spruce, PIR:T09251; contains Pfam PF01657:
Domain of unknown function
Length = 288
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 242 GNHEQMMIDGLSERGNVNHWLLNGGGWF 159
G+ E DG+S R V L+NGGG+F
Sbjct: 153 GSSEGYNTDGISRRDAVLTELVNGGGYF 180
>At3g55910.1 68416.m06213 expressed protein PA26, p53 regulated
PA26-T3 nuclear protein, Homo sapiens, EMBL:AF033121
Length = 93
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 137 EILAKALAHKADELPLI--IELVSKDKKYVICHADYPFDEYEFG 12
E++ K A A+ +PL I++V+ YVI D+YE+G
Sbjct: 23 EVMEKLHAADAETIPLASNIQMVNMVNNYVIMSYGLLHDDYEYG 66
>At1g69545.1 68414.m07997 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
similar to disease resistance protein RPP1-WsA
(GI:3860163)[Arabidopsis thaliana]
Length = 703
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 382 NLMN--KLDTIGFDNKKDLLISVGDLVDRGNENV-ECLELITFP 260
NL+N KLD G + +L +S+G+L++ N+ EC L+ P
Sbjct: 281 NLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELP 324
>At1g07010.1 68414.m00746 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 389
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -1
Query: 334 LLISVGDLVDRGNENVECLELI 269
+L+ VGD++DRG++ + L L+
Sbjct: 96 VLVQVGDILDRGDDEIAILSLL 117
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,227,052
Number of Sequences: 28952
Number of extensions: 321289
Number of successful extensions: 831
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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