Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0745X.Seq
(423 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.30
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.30
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 3.7
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 21 3.7
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 4.9
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 21 6.5
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 6.5
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 6.5
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 6.5
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 6.5
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 6.5
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.0 bits (52), Expect = 0.30
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -2
Query: 236 SSFMIKTRVTHSSRGTDDRQPAPRTYNTQRTDPSVSNVPSIDAPAIFGRFLYHH*DWITT 57
++FM ++ T + D+ AP+ +Q +D + N D P I G Y + + T
Sbjct: 1136 TTFMEGSKATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRN-EET 1194
Query: 56 FWHIL 42
FW+ L
Sbjct: 1195 FWNEL 1199
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 403 GVDLREITAQGSS 365
G+D+ ITAQ SS
Sbjct: 218 GLDIASITAQASS 230
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 25.0 bits (52), Expect = 0.30
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -2
Query: 236 SSFMIKTRVTHSSRGTDDRQPAPRTYNTQRTDPSVSNVPSIDAPAIFGRFLYHH*DWITT 57
++FM ++ T + D+ AP+ +Q +D + N D P I G Y + + T
Sbjct: 1136 TTFMEGSKATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRN-EET 1194
Query: 56 FWHIL 42
FW+ L
Sbjct: 1195 FWNEL 1199
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 403 GVDLREITAQGSS 365
G+D+ ITAQ SS
Sbjct: 218 GLDIASITAQASS 230
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 3.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 404 WRRSSRDYRARF 369
W+R DYR RF
Sbjct: 232 WKRIPHDYRKRF 243
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 3.7
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT +A++GNP
Sbjct: 468 WTNFAKNGNP 477
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 202 AHVEQTIDNPRRARTTRNAP 143
+H T PR A +RNAP
Sbjct: 249 SHQPATKSKPRPAPASRNAP 268
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 20.6 bits (41), Expect = 6.5
Identities = 5/10 (50%), Positives = 10/10 (100%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT++A++G+P
Sbjct: 468 WTSFAKNGDP 477
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT +AR+G+P
Sbjct: 456 WTNFARNGSP 465
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT +AR+G+P
Sbjct: 458 WTNFARNGSP 467
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT +AR+G+P
Sbjct: 456 WTNFARNGSP 465
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 236 WTAYARSGNP 265
WT +AR+G+P
Sbjct: 458 WTNFARNGSP 467
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1
Query: 316 PGHLEPGADRSHTDAHPT 369
P H P +D+ H H T
Sbjct: 32 PRHFNPPSDKLHHPIHQT 49
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,700
Number of Sequences: 336
Number of extensions: 1684
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -