Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0743.Seq
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 161 8e-41
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 96 4e-21
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 96 4e-21
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 88 1e-18
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 87 3e-18
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 85 1e-17
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 84 2e-17
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 82 6e-17
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 79 8e-16
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 76 5e-15
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 75 1e-14
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 75 1e-14
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 75 1e-14
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 74 2e-14
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 74 2e-14
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 73 5e-14
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 70 4e-13
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 66 6e-12
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 62 7e-11
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 54 1e-08
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 32 0.088
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 2.5
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 5.8
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 26 5.8
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 25 7.7
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 161 bits (391), Expect = 8e-41
Identities = 77/84 (91%), Positives = 84/84 (100%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSPAIIFIDE+D+IA
Sbjct: 271 KTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 330
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKREKT+GEVERR+VSQLLTLMDG
Sbjct: 331 PKREKTNGEVERRVVSQLLTLMDG 354
Score = 158 bits (384), Expect = 6e-40
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
+K S+V+VMAATNRPNSIDPALRRFGRFDRE+D+GIPD TGRLEILRIHTKNMKL DDV
Sbjct: 355 MKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDV 414
Query: 434 DLEQIAAESHGHVGADLASLCSEAA 508
DLEQIAAE+HG+VG+DLASLCSEAA
Sbjct: 415 DLEQIAAETHGYVGSDLASLCSEAA 439
Score = 84.2 bits (199), Expect = 2e-17
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE A F + GPE++S GESESN+R F++A +P ++F+DELD+IA
Sbjct: 544 KTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIA 603
Query: 183 PKREKTHGEV--ERRIVSQLLTLMDG 254
R + G+ R+V+QLLT MDG
Sbjct: 604 KARGASAGDSGGGDRVVNQLLTEMDG 629
Score = 72.5 bits (170), Expect = 5e-14
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +1
Query: 508 LQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSAL 642
+QQIREKMD+IDL++D+IDAEVL+SL V+MDNFR+A+ S+PSAL
Sbjct: 440 MQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSAL 484
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
+ +V V+ ATNRP+ IDPAL R GR D+ I + +PD R IL+ ++ + +DV
Sbjct: 630 VNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDV 689
Query: 434 DLEQIAAESHGHVGADLASLCSEA 505
DL +A +HG GADL + A
Sbjct: 690 DLRAVAKATHGFSGADLEFVVQRA 713
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 96.3 bits (229), Expect = 4e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ RAVA E A F I+GP ++ K GE+ES LRK FE+A + P+IIFIDE+DA+A
Sbjct: 326 KTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALA 385
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKR + E E R V+ LLTL+DG
Sbjct: 386 PKRTEDVSEAESRAVATLLTLLDG 409
Score = 93.1 bits (221), Expect = 3e-20
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ + + V+V+AATNRPNSID ALRR GR ++EI+IGIPD + RL+I+++
Sbjct: 402 TLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLS 461
Query: 410 NMKLG-DDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRT 553
+ +D LE +A+ +H +VGADLA++ EAA R ++R ISL T
Sbjct: 462 GVPNEINDAQLEDLASRTHAYVGADLAAVVREAAL-RAIKRTISLQKDT 509
Score = 81.8 bits (193), Expect = 8e-17
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
+V+V+AATNRP+ IDPAL R GR DR + +G P+ R +I++I + MK +DVDL+ I
Sbjct: 682 NVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLI 741
Query: 449 AAESHGHVGADLASLCSEA 505
A ++ G GA++ +LC EA
Sbjct: 742 AEKTEGCSGAEVVALCQEA 760
Score = 74.9 bits (176), Expect = 1e-14
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT+ A+A+A ETG F + GPE+ K GESE +R+ F++A + SP++IF DE+DA+
Sbjct: 595 KTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALT 654
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R + + R+V+ LL +DG
Sbjct: 655 ANRGEDNS--SDRVVAALLNELDG 676
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 96.3 bits (229), Expect = 4e-21
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A A+ANE G F I+ P I+S ++GESE +R+ FEEA +P ++FIDE+DA+
Sbjct: 221 KTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVT 280
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
PKRE E+ERRIV+Q LT MD
Sbjct: 281 PKRESAQREMERRIVAQFLTCMD 303
Score = 89.4 bits (212), Expect = 4e-19
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVANE+ A F I GPE+++K GESE +R+ F A +SP +IF DELDA+
Sbjct: 539 KTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMV 598
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
P+R+ + E R+V+ LLT +DG
Sbjct: 599 PRRDDSLSEASSRVVNTLLTELDG 622
Score = 83.4 bits (197), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V+V+ ATNRP+S+D ALRR GRFDREI + +P R +ILR K +KL D D Q+A
Sbjct: 315 VLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLA 374
Query: 452 AESHGHVGADLASLCSEA 505
++ G+VGADL +L + A
Sbjct: 375 KQTPGYVGADLKALTAAA 392
Score = 70.9 bits (166), Expect = 2e-13
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ L S V V+AATNRP+ IDPA+ R GR D+ + + +PDA R+EIL+ TK
Sbjct: 615 TLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTK 674
Query: 410 NMKLGDDVDLEQIAAESH--GHVGADLASLCSEAA 508
L ++V+L+ + + GADLA+L EAA
Sbjct: 675 QTPLHEEVNLDVLGRDERCSNFSGADLAALVREAA 709
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 88.2 bits (209), Expect = 1e-18
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Frame = +2
Query: 215 KTYRFTVIDAYGWLKKS--SH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 385
+T ++D G+ K +H V+ + ATN P S+DPAL R GRFDR I + +PD GRL
Sbjct: 385 QTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRL 444
Query: 386 EILRIHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEAA 508
IL HT+++ LG DVDL IA + G GADLA+L ++AA
Sbjct: 445 AILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAA 485
Score = 67.7 bits (158), Expect = 1e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ARAVA E FF ++G + G +R+ F A K +P+IIFIDELDAI
Sbjct: 313 KTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIG 372
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
KR R+ ++QLL +DG
Sbjct: 373 QKRNARDAAHMRQTLNQLLVDLDG 396
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 86.6 bits (205), Expect = 3e-18
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL- 439
S H++V A TNRP+ +DPAL R GRFDR+I I PD GR +I ++H K++K D++DL
Sbjct: 433 SEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLI 492
Query: 440 -EQIAAESHGHVGADLASLCSEAA 508
+++A + G GAD+ ++C+E A
Sbjct: 493 AKRLAVLTSGFTGADIMNVCNEGA 516
Score = 62.1 bits (144), Expect = 7e-11
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A A E F ++G E + G S +R F A KN+P IIFIDE+DAI
Sbjct: 342 KTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIG 401
Query: 183 PKREK--THGEVERR--IVSQLLTLMDG 254
R + G + R ++QLL MDG
Sbjct: 402 KARGRGGQFGSNDERESTLNQLLVEMDG 429
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 84.6 bits (200), Expect = 1e-17
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E F I GPE+++ GESE+N+R FE+A +SP +IF DELD+IA
Sbjct: 701 KTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIA 760
Query: 183 PKR--EKTHGEVERRIVSQLLTLMD 251
P R G V R+VSQLL +D
Sbjct: 761 PHRGNSSDSGNVMDRVVSQLLAELD 785
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLGDDVDL 439
+ +V V+ ATNRP+ +DP+L R GRFD+ + +GI + +LR TK KL + +DL
Sbjct: 792 NKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDL 851
Query: 440 EQIAAESH-GHVGADLASLCSEAACSRFVRR 529
+IA H GAD+ +LCS+A S R+
Sbjct: 852 NEIAKNCHPNFTGADMYALCSDAVLSAIKRK 882
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT VA+ A F I+ E A E+ L + K+ AIIF+ +LD ++
Sbjct: 435 KTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAIIFVKDLDVLS 494
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
++ + + + LL+ +D
Sbjct: 495 ISSDEGNIVPGSKSIQILLSKID 517
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 83.8 bits (198), Expect = 2e-17
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ ++ VI++ ATNRP+++DPALRR GRFDRE +PD R +I+ IHT+
Sbjct: 394 TLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTR 453
Query: 410 NMKLGDDVDL-EQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRL 562
N L +A +S G+ GADL +LC+EAA + R + L T RL
Sbjct: 454 NWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRSTKRL 505
Score = 72.5 bits (170), Expect = 5e-14
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 167
KTL+ARA+A + F++ G + +SK GE+E LR FEEA P+IIF DE
Sbjct: 313 KTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDE 372
Query: 168 LDAIAPKREKTHGEVERRIVSQLLTLMDG 254
+D +AP R ++ IVS LL LMDG
Sbjct: 373 IDGLAPVRSSKQEQIHASIVSTLLALMDG 401
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 82.2 bits (194), Expect = 6e-17
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
++ V+ ATNRPN++D AL R GR DR+++ G+PD GR ILRIH K+M + D+ E I
Sbjct: 318 NIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELI 377
Query: 449 AAESHGHVGADLASLCSEA 505
A GA+L S+C+EA
Sbjct: 378 ARLCPSQTGAELRSVCTEA 396
Score = 62.5 bits (145), Expect = 5e-11
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL ARAVAN T A F + G E++ K GE +R+ FE A IIF DE+DAI
Sbjct: 226 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIG 285
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
R + G+ E +R + +L+T +DG
Sbjct: 286 GARFDDGAGGDNEVQRTMLELITQLDG 312
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 78.6 bits (185), Expect = 8e-16
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
+ ++ V+ ATNR + +DPAL R GR DR+I+ P A R EILRIH+++M L +DL+
Sbjct: 283 TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLK 342
Query: 443 QIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRL 562
IA + +G GA+L +C+EA R + +T L
Sbjct: 343 SIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFEL 382
Score = 64.1 bits (149), Expect = 2e-11
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I
Sbjct: 192 KTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 251
Query: 183 PKREKTHG-----EVERRIVSQLLTLMDG 254
R + G EV+R ++ +LL +DG
Sbjct: 252 SSRSDSSGGSGDSEVQRTML-ELLNQLDG 279
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 75.8 bits (178), Expect = 5e-15
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V V+AATNR +++DPAL R GR DR+++ +P+ R+ ILRIH++ M + DD++ E++A
Sbjct: 325 VKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELA 384
Query: 452 AESHGHVGADLASLCSEA 505
+ + GA L S+C EA
Sbjct: 385 RSTDEYNGAMLKSVCVEA 402
Score = 65.7 bits (153), Expect = 6e-12
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARA A ++ A F + P+++ G+ +R AF A + SPAIIFIDELDAI
Sbjct: 232 KTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIG 291
Query: 183 PKR---EKTHGEVERRIVSQLLTLMDG 254
KR EK +R + +LL +DG
Sbjct: 292 TKRFDSEKAGDREVQRTMLELLNQLDG 318
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 74.9 bits (176), Expect = 1e-14
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
K+ +A+AVA E G+ FF I+ +++SK GESE +R+ FE A + P+IIFIDE+D++
Sbjct: 175 KSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLC 234
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R + E RRI ++ L M+G
Sbjct: 235 GSRSEGESESSRRIKTEFLVQMNG 258
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDV 433
K S V+V+ ATN P ++D A+RR RF++ I I +P+A R + ++ +
Sbjct: 261 KDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQ 318
Query: 434 DLEQIAAESHGHVGADLASLCSEA 505
D +++A + G+ G+D++ + +A
Sbjct: 319 DFKELAKMTDGYSGSDISIVVRDA 342
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 74.5 bits (175), Expect = 1e-14
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ +AVAN T A F + G E + K GE +R F A +N+PAIIFIDE+DAIA
Sbjct: 181 KTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIA 240
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
KR +T + E +RI+ +LLT MDG
Sbjct: 241 TKRFDAQTGADREVQRILIELLTQMDG 267
Score = 49.2 bits (112), Expect = 5e-07
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDI-GIPDATGRLEILRIHTKNMKLGDDVD 436
+ ++V V+ ATNR +++DPAL R GR DR+I+ D R + + T M L +VD
Sbjct: 270 QGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVD 329
Query: 437 LEQIAAESHGHVGADLASLCSEA 505
L+ GA +A++ +A
Sbjct: 330 LDTFIMRPDASSGAQIAAIMQDA 352
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 74.5 bits (175), Expect = 1e-14
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ L V+V+ ATNRPN +DPALRR GRFDRE +P+ R++IL I++
Sbjct: 500 TLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSL 559
Query: 410 NM--KLGDDVDLEQIAAESHGHVGADLASLCSEAACSRFVRR 529
+ K+ + L +A + G+ GADL +LC+EAA + VRR
Sbjct: 560 HFSPKIPESY-LLHLAESTSGYGGADLKALCTEAALNA-VRR 599
Score = 70.5 bits (165), Expect = 2e-13
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 167
KTL+AR +A FFL G + +SK GE+E LR FEEA + P+IIF DE
Sbjct: 419 KTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDE 478
Query: 168 LDAIAPKREKTHGEVERRIVSQLLTLMDG 254
+D +AP R + IVS LL LMDG
Sbjct: 479 IDGLAPIRSSKQEQTHSSIVSTLLALMDG 507
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 69 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 173
E++ S L K F EA KN+P+IIFI+ ++
Sbjct: 742 ELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNVE 776
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 73.7 bits (173), Expect = 2e-14
Identities = 33/76 (43%), Positives = 53/76 (69%)
Frame = +2
Query: 278 VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAE 457
++ ATNRP+++DPAL R GR DR+I+I +P+ GR+EIL+IH + + ++D E +
Sbjct: 274 IIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKL 333
Query: 458 SHGHVGADLASLCSEA 505
+ G GADL ++ +EA
Sbjct: 334 TDGTNGADLRNVVTEA 349
Score = 60.9 bits (141), Expect = 2e-10
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA G F + I+ K GES +R+ F A ++ P +IF+DE+DAI
Sbjct: 179 KTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIG 238
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
+R E T + E +R + +LL MDG
Sbjct: 239 GRRFSEGTSADREIQRTLMELLNQMDG 265
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 73.7 bits (173), Expect = 2e-14
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVAN+T A F + G E++ K G+ +R+ F A+++SP+I+FIDE+DAI
Sbjct: 238 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIG 297
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
KR ER I +L L++
Sbjct: 298 TKRYDAQSGAEREIQRTMLELLN 320
Score = 63.7 bits (148), Expect = 2e-11
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +2
Query: 278 VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAE 457
V+ ATNR + +DPAL R GR DR+I PD + +I IHT M LG+DV+LE++
Sbjct: 334 VIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQC 393
Query: 458 SHGHVGADLASLCSEA 505
GA++ ++ SEA
Sbjct: 394 KDDLSGAEIKAIVSEA 409
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 72.5 bits (170), Expect = 5e-14
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT +A A+++ F I GPE++ K G+SE +R F A P ++F DE D++A
Sbjct: 653 KTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA 712
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
P+R + V R+V+Q+LT MDG
Sbjct: 713 PRRGQDSTGVTDRVVNQILTQMDG 736
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++AAT RP+ IDPAL R GR D+ I +P+ RLE+L+ + + L++++
Sbjct: 743 VYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLS 802
Query: 452 AESHGHVGADLASLCSEA 505
+ G+ ADL+SL +A
Sbjct: 803 TLTDGYTYADLSSLLYDA 820
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 69.7 bits (163), Expect = 4e-13
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Frame = +2
Query: 266 SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LGDDV 433
++++V+ TNR + ID AL R GR + ++I +PD GRL+IL+IHT M L +DV
Sbjct: 416 NNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDV 475
Query: 434 DLEQIAAESHGHVGADLASLCSEAACSRFVR 526
D+E++A+ + GA++A L A+ F R
Sbjct: 476 DMEELASLTKNFSGAEIAGLIKSASSFAFYR 506
Score = 62.1 bits (144), Expect = 7e-11
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 KTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFEEADK--------NSPAII 155
KTLIAR + A ++NGPEI++K G+SE N+RK F +A++ + II
Sbjct: 317 KTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHII 376
Query: 156 FIDELDAIAPKREKTHGE--VERRIVSQLLTLMDG 254
DELDAI KR + G+ V ++V+QLL MDG
Sbjct: 377 IFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDG 411
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 KTLIARAVA-NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 179
KT +A +A F L++ ++ +++ + FE++ K+ ++I +DE++ I
Sbjct: 598 KTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLSVIVVDEIERI 657
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 65.7 bits (153), Expect = 6e-12
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ARAVA E+ + FF I+ + SK GESE +R F A K SP+IIF+DE+D++
Sbjct: 505 KTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLL 564
Query: 183 PKREKTHGEVE--RRIVSQLL 239
R E E RRI ++ L
Sbjct: 565 SARSSDGNEHETSRRIKTEFL 585
Score = 43.2 bits (97), Expect = 4e-05
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV-DLEQI 448
V+V+AATN P ID A RR RF R I +PD T R L K K + D+E I
Sbjct: 606 VLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAI 663
Query: 449 AAESHGHVGADLASLCSEAA 508
+ + G+DL +L +AA
Sbjct: 664 VKATEYYSGSDLTALAKDAA 683
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 62.1 bits (144), Expect = 7e-11
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ARAVA E A FF I+ + SK G+SE +R FE A + + ++IF+DE+D+I
Sbjct: 425 KTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSIL 484
Query: 183 PKREKTHGEVE--RRIVSQLL 239
R + E E RR+ ++ L
Sbjct: 485 SARNDSGNEHESSRRLKTEFL 505
Score = 44.0 bits (99), Expect = 2e-05
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR--IHTKNMKLGDDVD 436
S V+V+AATN P ID A RR RF + I +P+ R + L +H + L ++ D
Sbjct: 523 SPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEE-D 579
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
LE++ + G+ G+D+ +L +AA
Sbjct: 580 LEELVNLTEGYSGSDITALAKDAA 603
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 54.4 bits (125), Expect = 1e-08
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+A ++ A F ++ + K GES + F A K P IIFIDE+D
Sbjct: 138 KTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFL 197
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
+R++T E +I ++ +++ DG
Sbjct: 198 RQRQRTDHEAMAQIKAEFMSMWDG 221
Score = 50.8 bits (116), Expect = 2e-07
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +2
Query: 248 GWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGD 427
G L S V+V+ ATNRP ID A+RR R + I +P+A R +IL ++ K + L
Sbjct: 221 GLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEA 278
Query: 428 DVDLEQIAAESHGHVGADLASLCSEA 505
+ D + + G G+ + +C A
Sbjct: 279 NFDWNGVVNATAGLSGSYIKEVCRSA 304
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 31.9 bits (69), Expect = 0.088
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 233 VIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIG--IPDATGRLEILRIHT 406
+++A + S I+ TN P +DPAL R GR D + +G P+ R R +
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQV-REMFTRFYG 385
Query: 407 KNMKLGDDV 433
+ ++ DD+
Sbjct: 386 HSPEMADDL 394
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 488 SLCSEAACSRFVRRWISLTSRTIRLTQRFSILWLS 592
S S+ S F+ +WI + + +RL +F I WLS
Sbjct: 50 SSISDVPKSGFLVKWIIIDAIYLRLLPKFRIPWLS 84
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 294 FVAAITITWDDFFSHP*ASITVKRYVFPLHRGFSLSLV 181
FV+ I W S P A++ + +V H+G + SLV
Sbjct: 402 FVSIIVTPWGMDMSFPAATLMLSDFVPKQHQGIAASLV 439
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -2
Query: 588 SQRIENLCVNLIVLEVNEIHLLTNLLQAASEHRDA 484
S+ IE C N +++++N+I L+ + AA+ + A
Sbjct: 332 SKAIELKCANALLVKINQIGSLSETIDAANMAKKA 366
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 7.7
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -3
Query: 209 FTVGFLSLWCNSIEFINEDNSRR 141
+TV ++LW +++++ +D RR
Sbjct: 633 YTVKIIALWGRAVKYLKQDGKRR 655
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,392,827
Number of Sequences: 5004
Number of extensions: 42748
Number of successful extensions: 224
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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