Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0743.Seq
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 128 4e-30
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 6e-27
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 84 1e-16
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 83 2e-16
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 79 2e-15
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 78 6e-15
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 77 2e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 75 5e-14
SB_732| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 72 5e-13
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 66 3e-11
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 60 2e-09
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 38 0.006
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 32 0.37
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 32 0.37
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 32 0.37
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 32 0.37
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 32 0.37
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 32 0.37
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 32 0.37
SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 31 0.86
SB_50283| Best HMM Match : F-box (HMM E-Value=0.00036) 28 8.0
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 128 bits (309), Expect = 4e-30
Identities = 60/65 (92%), Positives = 63/65 (96%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
LK+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPDATGRLEILRIHTKNMKLGDDV
Sbjct: 192 LKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDV 251
Query: 434 DLEQI 448
DLEQI
Sbjct: 252 DLEQI 256
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 357 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARSAAPCVLFFDELDSIA 416
Query: 183 PKREKTHGE---VERRIVSQLLTLMDG 254
R G+ R+++Q+LT MDG
Sbjct: 417 KSRGGNVGDGGGAADRVINQVLTEMDG 443
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 508 LQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSAL 642
L+QIREKMDLIDLED+ IDAEVL+SLAVSMD+FRYAM S+PSAL
Sbjct: 253 LEQIREKMDLIDLEDETIDAEVLDSLAVSMDDFRYAMGVSNPSAL 297
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/89 (38%), Positives = 47/89 (52%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
+V ++ ATNRP+ IDPA+ R GR D+ I I +PD DVDL+ +
Sbjct: 449 NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD-----------------DGDVDLDYV 491
Query: 449 AAESHGHVGADLASLCSEAACSRFVRRWI 535
A +HG GADL +C + AC +R I
Sbjct: 492 AKVTHGFSGADLTEIC-QRACKLAIREAI 519
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 192 EKTHGEVERRIVSQLLTLMDG 254
++THGEVERRIVSQLLTLMDG
Sbjct: 171 KETHGEVERRIVSQLLTLMDG 191
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 118 bits (283), Expect = 6e-27
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT+IARAVANETG FF INGPE++S+ GE+E+ LR+ F EA SP+I+FIDELDA+
Sbjct: 303 KTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALC 362
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
P+R+K E ERR+V+ LLTLMDG
Sbjct: 363 PRRDKVQNEFERRVVATLLTLMDG 386
Score = 97.9 bits (233), Expect = 7e-21
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++D ++V+V+AATNRP+++DPALRR GRFDREI+IGIP T R +IL K
Sbjct: 382 TLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEIGIPSVTDRRDILVTLLK 441
Query: 410 NMKLG-DDVDLEQIAAESHGHVGADLASLCSEAACSRFVR 526
N+ D D+ +A +HG+VGADLA+ C EA+ F R
Sbjct: 442 NVPHSLHDEDISSLAESAHGYVGADLAAACKEASLYAFKR 481
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTLIARA+A E+G F I GPE+ SK GESE +R+ F +A +P+I+F DELDAIA
Sbjct: 584 KTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLKARATAPSIVFFDELDAIA 643
Query: 183 PKREKTHG-EVERRIVSQLLTLMDG 254
+R T G +V R+++QLLT +DG
Sbjct: 644 GQRNSTGGSDVNDRVLTQLLTELDG 668
Score = 67.3 bits (157), Expect = 1e-11
Identities = 40/97 (41%), Positives = 53/97 (54%)
Frame = +2
Query: 218 TYRFTVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 397
T T +D LK VI +AATNRP+ ID AL R GR DR I + +P R IL
Sbjct: 660 TQLLTELDGVETLKD---VIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILE 716
Query: 398 IHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEAA 508
IH +DLE + + G+ GA++A++C EAA
Sbjct: 717 IHLARTPCEGSLDLEDLVERTEGYSGAEIAAVCREAA 753
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 105 bits (251), Expect = 4e-23
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
L+ VIV+ ATNRPN++DPALRR GRFDRE+ IG+P A RL+ILR H K + L DV
Sbjct: 345 LESRGRVIVIGATNRPNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDV 404
Query: 434 DLEQIAAESHGHVGADLASLCSEAACSRFVR 526
DL +A + G+VGADLASLC +AA + R
Sbjct: 405 DLTHLAEITVGYVGADLASLCQQAAFAALKR 435
Score = 77.8 bits (183), Expect = 8e-15
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA---DKNSPAIIFIDELD 173
KTL+ + G NG ++ AGESE NLR+ F +A + P ++FIDELD
Sbjct: 258 KTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKARYASRFGPCVLFIDELD 317
Query: 174 AIAPKREKTHGEVERRIVSQLLTLMDG 254
A+ PKR + E E RIV+QLLTLMDG
Sbjct: 318 ALCPKRGSSGNEEENRIVAQLLTLMDG 344
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758
Query: 452 AESHGHVGADLASLCSE 502
+ + GADL +LC E
Sbjct: 759 EGTELYSGADLENLCRE 775
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT + RA A+ T F ++ ++ S G++E LR+ + P ++F+DELD++A
Sbjct: 531 KTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELVLQL----PLLLFLDELDSLA 586
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
KR G +E R+++ LL MDG
Sbjct: 587 GKRGNNLG-METRLLATLLNEMDG 609
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A A+A E F + EI+S ++GESE +R+ F A +P I+F+DE+DAI
Sbjct: 723 KTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTSAVAQAPCILFLDEIDAIT 782
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
PKRE ++ERRIVSQLL+ MD
Sbjct: 783 PKRENASKDMERRIVSQLLSCMD 805
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +2
Query: 266 SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 394
+HV+V+ ATNRP+S+DPALRR GRFDREI +GIPD + R I+
Sbjct: 813 AHVLVIGATNRPDSLDPALRRAGRFDREISMGIPDESARARIV 855
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE+G F + GPE+++ GESE +R+ F+ A ++P +IF DELD++
Sbjct: 30 KTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDELDSLC 89
Query: 183 PKRE-KTHGEVERRIVSQLLTLMDG 254
P+R + R+V+QLLT MDG
Sbjct: 90 PRRSGSSESGSSVRVVNQLLTEMDG 114
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E F + GPE+++ G+SE N+R+ F A SP +IF DELD++A
Sbjct: 857 KTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPCVIFFDELDSLA 916
Query: 183 PKREKT--HGEVERRIVSQLLTLMDG 254
P R ++ G V R+V+QLL +DG
Sbjct: 917 PNRGRSGDSGGVMDRVVAQLLAELDG 942
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLGDD 430
L + V V+ ATNRP+ +DPAL R GRFD+ + +G+ D +L +L+ T+ D
Sbjct: 943 LHSTCDVFVIGATNRPDLLDPALLRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSAD 1002
Query: 431 VDLEQIAAESHGHV-GADLASLCSEA 505
LE+ A + ++ GADL ++ S+A
Sbjct: 1003 FRLEEFANKLPLNLTGADLYAMASDA 1028
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD-- 436
S++V+V++ TNRP+ +DPAL R GRFDR+I + PD GR I ++H K +K D +
Sbjct: 185 STNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKL 244
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
++AA + G GAD+A++C+EAA
Sbjct: 245 ARKMAALTPGFTGADIANVCNEAA 268
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E G F I+G E + G + +R F +A KN+P IIFIDE+DA+
Sbjct: 94 KTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQARKNAPCIIFIDEIDAVG 153
Query: 183 PKREK---THGEVER-RIVSQLLTLMDG 254
R + G ER ++QLL MDG
Sbjct: 154 RARGRGGQFGGHDERENTLNQLLVEMDG 181
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A VA E G F I GPE++SK G SE +R F A P I+F DE D++A
Sbjct: 714 KTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPCILFFDEFDSLA 773
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
P+R V R+V+QLLT +DG
Sbjct: 774 PRRGHDSTGVTDRVVNQLLTQLDG 797
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++AAT+RP+ IDPAL R GR D+ + IPD R E+ R + ++ L DD+DL+ I+
Sbjct: 804 VYILAATSRPDLIDPALLRPGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSIS 863
Query: 452 AESHGHVGADLASL 493
H GAD+ +L
Sbjct: 864 DSCHHFTGADIKAL 877
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 167
KTL+ARA+ANE FF+ G + +SK GESE LR F++A P+IIF DE
Sbjct: 931 KTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDE 990
Query: 168 LDAIAPKREKTHGEVERRIVSQLLTLMDG 254
+D +AP R ++ IVS LL LMDG
Sbjct: 991 IDGLAPVRSSRQDQIHSSIVSTLLALMDG 1019
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ L V+++ ATNR ++IDPALRR GRFDRE +PD R IL IHT+
Sbjct: 1012 TLLALMDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQFALPDRDARRSILSIHTR 1071
Query: 410 NMKLG-DDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRW 532
+ + ++A G+ GAD+ +LC+EAA RR+
Sbjct: 1072 EWEPRLSQRFISELADYCVGYCGADIKALCTEAALCALRRRY 1113
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291
Query: 452 AESHGHVGADLASLCSE 502
+ + GADL +LC E
Sbjct: 292 EGTELYSGADLENLCRE 308
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT + RA A+ T F ++ ++ S G++E LR+ F +A +PAI+F+DELD++A
Sbjct: 60 KTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLKARATAPAILFLDELDSLA 119
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
KR G +E R+++ LL MDG
Sbjct: 120 GKRGNNLG-METRLLATLLNEMDG 142
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/98 (37%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----L 421
+++ ++V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IHT M+ L
Sbjct: 291 VEQLNNVLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVL 350
Query: 422 GDDVDLEQIAAESHGHVGADLASLCSEA---ACSRFVR 526
DDVDL ++A ++ GA++ L A A +RF++
Sbjct: 351 ADDVDLAELATQTKNFTGAEIEGLVRAAQSTAMNRFIK 388
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Frame = +3
Query: 3 KTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFEEA--------DKNSPAII 155
KTL+AR + +I+GPE+++K GESE+N+RK F EA D ++ +I
Sbjct: 195 KTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFAEAEEEQKRFGDNSALHLI 254
Query: 156 FIDELDAIAPKR--EKTHGE-VERRIVSQLLTLMDG 254
DE DA+ R T G V+ +V+QLL +DG
Sbjct: 255 IFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDG 290
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LEQ 445
VI++A+TNR + +D AL R GRFDR I I +P R+EI +H K + L +D ++
Sbjct: 265 VIMLASTNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKR 324
Query: 446 IAAESHGHVGADLASLCSEAA 508
+A + GH GAD+A++C+EAA
Sbjct: 325 LAELTPGHSGADIANICNEAA 345
Score = 58.0 bits (134), Expect = 7e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E F + G + + AG + +R F A K +P I++IDE+DAI
Sbjct: 171 KTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPCIVYIDEVDAIG 230
Query: 183 PKREKT-----HGEVERRIVSQLLTLMDG 254
R+ + H E E + +QLL MDG
Sbjct: 231 RSRKSSRSMGGHNEQENTL-NQLLVEMDG 258
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA+ T A F + G E + K GE +R F A +N+PAIIFIDE+DAIA
Sbjct: 211 KTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIA 270
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
KR +T + E +RI+ +LL MDG
Sbjct: 271 TKRFDAQTGADREVQRILLELLNQMDG 297
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
+V V+ ATNR +++DPAL R GR DR+I+ +PD + I T M L ++VDLE
Sbjct: 303 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLE 360
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 71.3 bits (167), Expect = 7e-13
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E G FF ++ + SK GESE +R FE A +P+ IF+DE+D+I
Sbjct: 296 KTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPSTIFVDEIDSIC 355
Query: 183 PKR-EKTHGEVERRIVSQLLTLMDG 254
+R + E RR+ S+LL MDG
Sbjct: 356 SRRGSDSEHEASRRVKSELLVQMDG 380
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP 367
++ V+V+AATN P +D ALRR R ++ I I +P
Sbjct: 389 ETKQVMVLAATNFPWDLDEALRR--RLEKRIYIPLP 422
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 263 SSH--VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
SSH + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++ M + DV+
Sbjct: 228 SSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVN 287
Query: 437 LEQIAAESHGHVGADLASLCSEA 505
++++ + GA L ++C EA
Sbjct: 288 FDELSRCTDDFNGAMLKAVCVEA 310
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 69 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGEVERRIVSQLL 239
+I G+ +R AF A + +PAIIFIDELDAI KR EK +R + +LL
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 221
Query: 240 TLMDG 254
+DG
Sbjct: 222 NQLDG 226
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 179
K+ +A+AVA E + F ++ +++SK GESE +++ FE A +N P+IIFIDE+D++
Sbjct: 178 KSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEVDSL 237
Query: 180 APKREKTHGEVERRIVSQLLTLMDG 254
R + E RRI ++ L M G
Sbjct: 238 CGSRSENESESARRIKTEFLVQMQG 262
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 179 CTKERENPR*SGKTYRFT-VIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREID 355
C EN S + + ++ G + V+V+ ATN P ++D A+RR RF++ I
Sbjct: 238 CGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEKRIY 295
Query: 356 IGIPDATGRLEILRIHTKNMK-LGDDVDLEQIAAESHGHVGADLASLCSEA 505
I +P+ R ++ +H K L +++Q+ ++ G+ GAD++ + EA
Sbjct: 296 IPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGADISVVVREA 346
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL ARAVAN T A F + G E++ K GE +R+ FE A I+F DE+DAI
Sbjct: 131 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIVFFDEIDAIG 190
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
R + G+ E +R + +L+ +DG
Sbjct: 191 GARFDDGAGGDNEVQRTMLELINQLDG 217
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/34 (52%), Positives = 28/34 (82%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 370
++ V+ ATNRP+++DPAL R GR DR+++ G+PD
Sbjct: 223 NIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 256
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 58.0 bits (134), Expect = 7e-09
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E G FF +G E G + +R F A +++P I+F+DELDAI
Sbjct: 177 KTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAPCIVFVDELDAIG 236
Query: 183 PKR-EKTHGEVERRIVSQLL 239
R H ++QLL
Sbjct: 237 GSRVVHDHQPYSSMTLNQLL 256
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 48.0 bits (109), Expect = 7e-06
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE--------------EADKN 140
KTL+ARAVA+ T F ++G E++ K GE +R+ F ++ ++
Sbjct: 224 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMARHGENLQAMYFVDSREH 283
Query: 141 SPAIIFIDELDAIAPKREK--THGEVE-RRIVSQLLTLMDG 254
+P+IIF+DE+D+I R + + G+ E +R + +LL +DG
Sbjct: 284 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 324
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 379
+ ++ V+ ATNR + +D AL R GR DR+I+ P+ G
Sbjct: 328 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 335 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGADL 484
R DR+I+ +PD + I IHT+ M L +DV+LE+ GAD+
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 90 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 239
GE E +R F A PA+IF+DE+D++ +R E RRI ++ L
Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFL 51
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 35.1 bits (77), Expect = 0.053
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMS 80
KTL+A+A+ANE+G F + GPE+++
Sbjct: 30 KTLLAKAIANESGINFISVKGPELLN 55
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 131
KTL+ + G NG ++ AGESE NLR+ F +A
Sbjct: 88 KTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKA 130
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSK 83
KTL+A+AVAN+T A F + G E++ K
Sbjct: 427 KTLLAKAVANQTSATFLRVVGSELIQK 453
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 336 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 395
Query: 416 KLGDDV 433
+G+ +
Sbjct: 396 SIGERI 401
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 343 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 402
Query: 416 KLGDDV 433
+G+ +
Sbjct: 403 SIGERI 408
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 261 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 320
Query: 416 KLGDDV 433
+G+ +
Sbjct: 321 SIGERI 326
>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 406
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 337 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 396
Query: 416 KLGDDV 433
+G+ +
Sbjct: 397 SIGERI 402
>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 296
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 53 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 112
Query: 416 KLGDDV 433
+G+ +
Sbjct: 113 SIGERI 118
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 271 WLVRNGVDVDRFSTKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 330
Query: 416 KLGDDV 433
+G+ +
Sbjct: 331 SIGERI 336
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 401 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 460
Query: 416 KLGDDV 433
+G+ +
Sbjct: 461 SIGERI 466
>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 343 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 402
Query: 416 KLGDDV 433
+G+ +
Sbjct: 403 SIGERI 408
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 271 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 330
Query: 416 KLGDDV 433
+G+ +
Sbjct: 331 SIGERI 336
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 343 WLVRNGVDVDRFSTKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 402
Query: 416 KLGDDV 433
+G+ +
Sbjct: 403 SIGERI 408
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL ++ + +T R N +DP +RR R + +I IP T + ++L +IHTK
Sbjct: 690 WLVRNGVDVDRFSTKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEY 749
Query: 416 KLGDDV 433
+G+ +
Sbjct: 750 SIGERI 755
>SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 345
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 446 IAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRLTQRFSILWLSPWITSGT 613
+A++ H+ + ++ + AC R+ + L RT+ T R S+ +S WI S T
Sbjct: 24 VASKFAAHISVSMINMTA-IACDRYFMLYFHLQYRTMVTTTRISVAIVSFWILSFT 78
>SB_50283| Best HMM Match : F-box (HMM E-Value=0.00036)
Length = 609
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +2
Query: 251 WLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNM 415
WL + + +T R N +D +RR R + +I IP T + ++L +IHTK
Sbjct: 424 WLVSNRVDVDRFSTKRKNPMDSVIRRRKRRGQGGEISIPCKPDKKTLKAQLLQKIHTKEY 483
Query: 416 KLGDDV 433
+G+ +
Sbjct: 484 SIGERI 489
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 436
+RE+D G DA R E++ + TKN L DVD
Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,387,925
Number of Sequences: 59808
Number of extensions: 335506
Number of successful extensions: 1010
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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