Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0743.Seq
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 162 2e-40
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 159 2e-39
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 159 2e-39
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 97 9e-21
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 94 7e-20
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 94 9e-20
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 92 4e-19
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 91 6e-19
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 90 1e-18
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 90 1e-18
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 89 3e-18
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 89 3e-18
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 85 3e-17
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 82 4e-16
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 81 9e-16
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 80 2e-15
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 80 2e-15
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 79 4e-15
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 78 5e-15
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 77 8e-15
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 76 2e-14
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 76 2e-14
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 75 3e-14
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 75 4e-14
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 75 4e-14
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 75 4e-14
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 75 4e-14
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 75 6e-14
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 73 1e-13
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 73 2e-13
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 72 3e-13
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 72 3e-13
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 72 4e-13
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 71 5e-13
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 70 2e-12
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 70 2e-12
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 69 3e-12
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 69 4e-12
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 69 4e-12
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 69 4e-12
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 68 5e-12
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 68 7e-12
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 67 9e-12
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 67 9e-12
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 67 9e-12
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 66 2e-11
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 66 2e-11
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 66 2e-11
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 66 3e-11
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 66 3e-11
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 65 4e-11
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 65 4e-11
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 65 5e-11
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 64 8e-11
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 63 2e-10
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 60 1e-09
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 44 7e-05
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 44 7e-05
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 44 1e-04
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 42 5e-04
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 42 5e-04
At2g41860.2 68415.m05174 calcium-dependent protein kinase, putat... 34 0.10
At2g41860.1 68415.m05173 calcium-dependent protein kinase, putat... 34 0.10
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 32 0.31
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 31 0.93
At3g49210.1 68416.m05378 expressed protein 31 0.93
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 30 1.2
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 30 1.6
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 30 1.6
At5g44320.1 68418.m05427 eukaryotic translation initiation facto... 29 2.2
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 29 2.2
At1g61950.1 68414.m06988 calcium-dependent protein kinase, putat... 29 2.2
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.2
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 29 2.8
At2g34440.1 68415.m04225 MADS-box family protein similar to SP|Q... 29 3.8
At1g05990.1 68414.m00627 calcium-binding protein, putative stron... 28 5.0
At4g08480.1 68417.m01399 mitogen-activated protein kinase, putat... 28 6.6
At1g21550.1 68414.m02695 calcium-binding protein, putative conta... 28 6.6
At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal hydrolase-r... 27 8.7
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 27 8.7
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 162 bits (393), Expect = 2e-40
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IA
Sbjct: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKREKTHGEVERRIVSQLLTLMDG
Sbjct: 315 PKREKTHGEVERRIVSQLLTLMDG 338
Score = 148 bits (359), Expect = 3e-36
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
LK +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHTKNMKL +DV
Sbjct: 339 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDV 398
Query: 434 DLEQIAAESHGHVGADLASLCSEAA 508
DLE+++ ++HG+VGADLA+LC+EAA
Sbjct: 399 DLERVSKDTHGYVGADLAALCTEAA 423
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/87 (45%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
Query: 183 PKREKTHGE---VERRIVSQLLTLMDG 254
+R + G+ R+++QLLT MDG
Sbjct: 588 TQRGNSVGDAGGAADRVLNQLLTEMDG 614
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++ ATNRP+ IDPAL R GR D+ I I +PD R +I + + + DVDL +A
Sbjct: 621 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALA 680
Query: 452 AESHGHVGADLASLCSEAACSRFVR 526
+ G GAD+ +C + +C +R
Sbjct: 681 KYTQGFSGADITEIC-QRSCKYAIR 704
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/45 (66%), Positives = 40/45 (88%)
Frame = +1
Query: 508 LQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSAL 642
LQ IREKMD+IDL+D++IDAE+LNS+AVS D+F+ A+ S+PSAL
Sbjct: 424 LQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSAL 468
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 159 bits (386), Expect = 2e-39
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IA
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKREKT+GEVERRIVSQLLTLMDG
Sbjct: 314 PKREKTNGEVERRIVSQLLTLMDG 337
Score = 149 bits (360), Expect = 2e-36
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
LK +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHTKNMKL +DV
Sbjct: 338 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDV 397
Query: 434 DLEQIAAESHGHVGADLASLCSEAA 508
DLE+I+ ++HG+VGADLA+LC+EAA
Sbjct: 398 DLERISKDTHGYVGADLAALCTEAA 422
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/87 (44%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 183 PKREKTHGE---VERRIVSQLLTLMDG 254
+R + G+ R+++QLLT MDG
Sbjct: 587 TQRGNSAGDAGGAADRVLNQLLTEMDG 613
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 508 LQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSAL 642
LQ IREKMD+IDLEDD IDAE+LNS+AVS ++F A+ S+PSAL
Sbjct: 423 LQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSAL 467
Score = 64.1 bits (149), Expect = 8e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++ ATNRP+ ID AL R GR D+ I I +PD RL I + + + DVD+ +A
Sbjct: 620 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALA 679
Query: 452 AESHGHVGADLASLCSEAACSRFVR 526
+ G GAD+ +C + AC +R
Sbjct: 680 KYTQGFSGADITEIC-QRACKYAIR 703
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 159 bits (386), Expect = 2e-39
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IA
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKREKT+GEVERRIVSQLLTLMDG
Sbjct: 314 PKREKTNGEVERRIVSQLLTLMDG 337
Score = 149 bits (360), Expect = 2e-36
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 254 LKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDV 433
LK +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHTKNMKL +DV
Sbjct: 338 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDV 397
Query: 434 DLEQIAAESHGHVGADLASLCSEAA 508
DLE+I+ ++HG+VGADLA+LC+EAA
Sbjct: 398 DLERISKDTHGYVGADLAALCTEAA 422
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/88 (44%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 183 PKR----EKTHGEVERRIVSQLLTLMDG 254
+R G R+++QLLT MDG
Sbjct: 587 TQRGGGSGGDGGGAADRVLNQLLTEMDG 614
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++ ATNRP+ ID AL R GR D+ I I +PD RL I + + + DVD+ +A
Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALA 680
Query: 452 AESHGHVGADLASLCSEAACSRFVR 526
+ G GAD+ +C + AC +R
Sbjct: 681 KYTQGFSGADITEIC-QRACKYAIR 704
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1
Query: 508 LQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSAL 642
LQ IREKMD+IDLEDD IDAE+LNS+AV+ ++F A+ S+PSAL
Sbjct: 423 LQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSAL 467
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 97.1 bits (231), Expect = 9e-21
Identities = 46/94 (48%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T+++ + ++ V+V+AATNRP+SI+PALRR GR DREI+IG+P +T R +IL I +
Sbjct: 507 TLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILR 566
Query: 410 NMKLG-DDVDLEQIAAESHGHVGADLASLCSEAA 508
M+ ++ +EQ+A +HG VGADL++LC EAA
Sbjct: 567 GMRHSLSNIQVEQLAMATHGFVGADLSALCCEAA 600
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT +AR A +G FF +NGPEI+S+ GESE L + F A +PA++FID+LDAIA
Sbjct: 431 KTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIA 490
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
P R++ E+ +R+V+ LL LMDG
Sbjct: 491 PARKEGGEELSQRMVATLLNLMDG 514
Score = 78.6 bits (185), Expect = 4e-15
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA+E F + GPE+ SK GESE +R F +A N+P+IIF DE+D++A
Sbjct: 771 KTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLA 830
Query: 183 PKREKTHG--EVERRIVSQLLTLMDG 254
R K + V R++SQLL +DG
Sbjct: 831 SIRGKENDGVSVSDRVMSQLLVELDG 856
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V V+AATNRP+ ID AL R GRFDR + +G P+ T R IL+IH + + D+ L+++A
Sbjct: 863 VTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELA 922
Query: 452 AESHGHVGADLASLCSEAA 508
+ + G+ GAD++ +C EAA
Sbjct: 923 SITKGYTGADISLICREAA 941
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 94.3 bits (224), Expect = 7e-20
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT +A A+ANE G F+ I+ E++S ++G SE N+R+ F +A + +P+I+FIDE+DAI
Sbjct: 280 KTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIG 339
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
KRE E+E+RIV+QLLT MDG
Sbjct: 340 SKRENQQREMEKRIVTQLLTCMDG 363
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTLIA+A ANE GA F I G E+++K GESE +R F+ A +P +IF DE+DA+
Sbjct: 575 KTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALT 634
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R K V R+++Q L +DG
Sbjct: 635 TSRGKEGAWVVERLLNQFLVELDG 658
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V+V+ ATNRP+++DPALRR GRF+ EI + PD R EIL + + ++L D ++IA
Sbjct: 380 VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIA 439
Query: 452 AESHGHVGADLASL 493
+ G VGADL S+
Sbjct: 440 RLTPGFVGADLESV 453
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
+V V+ ATNRP+ +DPA R GRF + + +P+A R IL+ + + VDL+ I
Sbjct: 663 NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGI 722
Query: 449 AAES-HGHVGADLASLCSEA 505
A + G GADLA L +A
Sbjct: 723 AKNNCEGFSGADLAHLVQKA 742
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 93.9 bits (223), Expect = 9e-20
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 227 FTVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 406
FT++D+ + V+V+A+TNR ++IDPALRR GRFD +++ P+ RL+IL+++T
Sbjct: 150 FTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYT 209
Query: 407 KNMKLGDDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRWIS--LTSRTIRLTQ 568
K + L VDL+ IA +G+VGADL +LC EA S R S LTS+ ++ +
Sbjct: 210 KKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAK 265
Score = 91.5 bits (217), Expect = 5e-19
Identities = 45/98 (45%), Positives = 64/98 (65%)
Frame = +2
Query: 212 GKTYRFTVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 391
G+ T++ L+++ ++V+AATNRP +ID AL R GRFD + + PD R EI
Sbjct: 407 GERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEI 466
Query: 392 LRIHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEA 505
L++HT+NM LGDDVDL +IA E+ GA+L LC E+
Sbjct: 467 LQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRES 504
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT +A+A AN A FF ++ E+ S GE E+ LR F+ A SP+IIF DE D +A
Sbjct: 333 KTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVA 392
Query: 183 PKR----EKTHGEVERRIVSQLLTLMDG 254
KR V R++S LLT MDG
Sbjct: 393 CKRGDESSSNSSTVGERLLSTLLTEMDG 420
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS----PAIIFIDEL 170
KT + RAV E A +++ + AGESE LR+AF EA ++ P++IFIDE+
Sbjct: 69 KTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEI 128
Query: 171 DAIAPKREKTHGEVERRIVSQLLTLMD 251
D + P+R+ E + RI SQL TLMD
Sbjct: 129 DVLCPRRD-ARREQDVRIASQLFTLMD 154
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 91.9 bits (218), Expect = 4e-19
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VIV+AATNRP +D AL R GRFDR++ +G+PD GR EIL++H+++ KL DV L IA
Sbjct: 362 VIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIA 421
Query: 452 AESHGHVGADLASLCSEAA 508
+ G GADLA+L +EAA
Sbjct: 422 MRTPGFSGADLANLMNEAA 440
Score = 67.7 bits (158), Expect = 7e-12
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G FF ++G E + G S R F +A NSP I+FIDE+DA+
Sbjct: 269 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVG 328
Query: 183 PKREKTHG---EVERRIVSQLLTLMDG 254
R G + + ++Q+LT MDG
Sbjct: 329 RMRGTGIGGGNDEREQTLNQILTEMDG 355
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
+S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H++ +G DVD E
Sbjct: 386 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYE 445
Query: 443 QIAAESHGHVGADLASLCSEAA 508
++A + G GADL +L +EAA
Sbjct: 446 KVARRTPGFTGADLQNLMNEAA 467
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA E G FF E + G S +R FE+A +P I+FIDE+DA+
Sbjct: 296 KTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVG 355
Query: 183 PKREKTHG---EVERRIVSQLLTLMDG 254
+R G + + ++QLLT MDG
Sbjct: 356 RQRGAGMGGGNDEREQTINQLLTEMDG 382
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
+S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H++ LG DVD +
Sbjct: 398 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFD 457
Query: 443 QIAAESHGHVGADLASLCSEAA 508
++A + G GADL +L +EAA
Sbjct: 458 KVARRTPGFTGADLQNLMNEAA 479
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA E G FF E + G S +R FE+A +P I+FIDE+DA+
Sbjct: 308 KTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVG 367
Query: 183 PKREKTHG---EVERRIVSQLLTLMDG 254
+R G + + ++QLLT MDG
Sbjct: 368 RQRGAGMGGGNDEREQTINQLLTEMDG 394
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 89.8 bits (213), Expect = 1e-18
Identities = 46/95 (48%), Positives = 63/95 (66%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H N K +DV LE IA
Sbjct: 366 VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIA 425
Query: 452 AESHGHVGADLASLCSEAACSRFVRRWISLTSRTI 556
+ G GADLA+L +EAA R S++S+ I
Sbjct: 426 MRTPGFSGADLANLLNEAAILAGRRARTSISSKEI 460
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G FF I+G E + G S +R F++A +N+P I+F+DE+DA+
Sbjct: 273 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 332
Query: 183 PKREKTHG---EVERRIVSQLLTLMDG 254
+R G + + ++QLLT MDG
Sbjct: 333 RQRGTGIGGGNDEREQTLNQLLTEMDG 359
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT--KNMKLGDDVD 436
SS VIV+ ATNR + +DPALRR GRFDR + + PD GR IL++H K + LGDDV+
Sbjct: 466 SSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVN 525
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
L IA+ + G GADLA+L +EAA
Sbjct: 526 LASIASMTTGFTGADLANLVNEAA 549
Score = 61.7 bits (143), Expect = 4e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E+ F + E + G S +R F A K +P+IIFIDE+DA+A
Sbjct: 375 KTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 434
Query: 183 PKRE----KTHGEVERRIVSQLLTLMDG 254
R+ + + ++QLLT MDG
Sbjct: 435 KSRDGKFRMVSNDEREQTLNQLLTEMDG 462
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 88.6 bits (210), Expect = 3e-18
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT--KNMKLGDDVD 436
+S VIV+ ATNR + +DPALRR GRFDR + + PD GR ILR+H K + LGDDV+
Sbjct: 462 NSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVN 521
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
L IA+ + G GADLA+L +EAA
Sbjct: 522 LGSIASMTTGFTGADLANLVNEAA 545
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E F + E + G S +R F A K +P+IIFIDE+DA+A
Sbjct: 371 KTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 430
Query: 183 PKRE---KTHGEVER-RIVSQLLTLMDG 254
R+ + ER + ++QLLT MDG
Sbjct: 431 KSRDGKFRMGSNDEREQTLNQLLTEMDG 458
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 85.4 bits (202), Expect = 3e-17
Identities = 44/95 (46%), Positives = 62/95 (65%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H+ N K V LE IA
Sbjct: 359 VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIA 418
Query: 452 AESHGHVGADLASLCSEAACSRFVRRWISLTSRTI 556
+ G GADLA+L +EAA R +++S+ I
Sbjct: 419 MRTPGFSGADLANLLNEAAILAGRRGKTAISSKEI 453
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G FF I+G E + G S +R F++A +N+P I+F+DE+DA+
Sbjct: 266 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 325
Query: 183 PKREKTHG---EVERRIVSQLLTLMDG 254
+R G + + ++QLLT MDG
Sbjct: 326 RQRGTGIGGGNDEREQTLNQLLTEMDG 352
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 81.8 bits (193), Expect = 4e-16
Identities = 46/118 (38%), Positives = 70/118 (59%)
Frame = +2
Query: 215 KTYRFTVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 394
KT +++ G+ +++ +IVMAATN P+ +DPAL R GRFDR I + PD GR EIL
Sbjct: 479 KTLHQLLVEMDGF-EQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEIL 537
Query: 395 RIHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRLTQ 568
++ + + +DVD++ IA + G GADLA+L + AA V L+S + +
Sbjct: 538 ELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAK 595
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G FF G E G +R F+ A K +P IIFIDE+DA+
Sbjct: 408 KTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVG 467
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R++ G ++ + QLL MDG
Sbjct: 468 STRKQWEGHT-KKTLHQLLVEMDG 490
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VI + ATNR + +DPAL R GRFDR+I + P+A GRL+IL+IH +K+ D VDL A
Sbjct: 577 VIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYA 636
Query: 452 AESHGHVGADLASLCSEAA 508
+ G GA LA L EAA
Sbjct: 637 SNLPGWSGAKLAQLVQEAA 655
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G F+ + G E + L G + +R F+ A N P++IFIDE+DA+A
Sbjct: 476 KTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALA 535
Query: 183 PKRE 194
+R+
Sbjct: 536 TRRQ 539
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA E G FF ++ E + G + +R F A KNSP+IIFIDELDA+
Sbjct: 380 KTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVG 439
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
KR ++ + + ++QLLT MDG
Sbjct: 440 GKRGRSFNDERDQTLNQLLTEMDG 463
Score = 74.1 bits (174), Expect = 8e-14
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
+ + VIV+AATNRP ++D AL R GRF R++ + PD GR +IL IH +++ L +D
Sbjct: 465 ESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAF 524
Query: 437 L--EQIAAESHGHVGADLASLCSEAA 508
L + +A+ + G VGADLA++ +EAA
Sbjct: 525 LICDLVASLTPGFVGADLANIVNEAA 550
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ L V+++ ATNR ++ID ALRR GRFDRE + +P R EIL IHT+
Sbjct: 509 TLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHTR 568
Query: 410 NMKLGDDVDL-EQIAAESHGHVGADLASLCSEAACSRFVRRW 532
K +L E++AA G+ GADL +LC+EAA F ++
Sbjct: 569 KWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKY 610
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVA---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 167
KTLIARA+A ++ G F++ G +++SK GE+E L+ FEEA +N P+IIF DE
Sbjct: 428 KTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDE 487
Query: 168 LDAIAPKREKTHGEVERRIVSQLLTLMDG 254
+D +AP R ++ IVS LL LMDG
Sbjct: 488 IDGLAPVRSSKQEQIHNSIVSTLLALMDG 516
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E F + GPE+++ GESE N+R FE+A P +IF DELD++A
Sbjct: 704 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLA 763
Query: 183 PKREKT--HGEVERRIVSQLLTLMDG 254
P R + G V R+VSQ+L +DG
Sbjct: 764 PARGASGDSGGVMDRVVSQMLAEIDG 789
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 GWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLG 424
G S + ++ A+NRP+ IDPAL R GRFD+ + +G+ DA+ R +L+ T+ KL
Sbjct: 789 GLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLS 848
Query: 425 DDVDLEQIAAESHG-HVGADLASLCSEA 505
+DV L +A + GAD+ +LC++A
Sbjct: 849 EDVSLYSVAKKCPSTFTGADMYALCADA 876
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
++ V+ ATNRP+++DPAL R GR DR+++ G+PD R +I +IHT+ M D+ E +
Sbjct: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
Query: 449 AAESHGHVGADLASLCSEA 505
A GAD+ S+C+EA
Sbjct: 367 ARLCPNSTGADIRSVCTEA 385
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI
Sbjct: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
R + G+ E +R + +++ +DG
Sbjct: 275 GARFDDGVGGDNEVQRTMLEIVNQLDG 301
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 77.4 bits (182), Expect = 8e-15
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VI +A+TNRP+ +DPAL R GRFDR+I I P GR+EIL++H + + +D+D +A
Sbjct: 549 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVA 608
Query: 452 AESHGHVGADLASLCSEAA 508
+ + G VGA+LA++ AA
Sbjct: 609 SMTDGMVGAELANIVEIAA 627
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E G FF I+ + + G S +R ++EA +N+P+++FIDELDA+
Sbjct: 456 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVG 515
Query: 183 PKRE--KTHGEVER-RIVSQLLTLMDG 254
+R K G ER ++QLL +DG
Sbjct: 516 RERGLIKGSGGQERDATLNQLLVSLDG 542
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 230 TVIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 409
T++ LK V+V+ ATN P++IDPALRR GRFDREI +P R I+ +HT+
Sbjct: 847 TLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTR 906
Query: 410 NM-KLGDDVDLEQIAAESHGHVGADLASLCSEAA 508
K L+ IA E+ G GAD+ +LC++AA
Sbjct: 907 KWPKPVSGYLLKWIAKETAGFAGADIQALCTQAA 940
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 167
KTL+ RA+ +F G + + K G++E LR F+ A+K P+IIF DE
Sbjct: 766 KTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDE 825
Query: 168 LDAIAPKREKTHGEVERRIVSQLLTLMDG 254
+D +APKR + + +VS LL L+DG
Sbjct: 826 IDGLAPKRSRQQDQTHSSVVSTLLALLDG 854
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
++ V+ ATNRP+ +DPAL R GR DR+++ +PD GR +I +IHT+ M D+ E +
Sbjct: 344 NIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELL 403
Query: 449 AAESHGHVGADLASLCSEAACSRFVRRWISLTSR 550
A GAD+ S+C EA R S+T +
Sbjct: 404 AGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEK 437
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVAN TGA F + G E++ K GE +R+ F+ A I+F DE+DAI
Sbjct: 252 KTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIG 311
Query: 183 PKR----EKTHGEVERRIVSQLLTLMDG 254
R + EV+R ++ ++L +DG
Sbjct: 312 GARFDDGVGSDNEVQRTML-EILYQLDG 338
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL--EQ 445
V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+ K +KL + ++
Sbjct: 461 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQR 520
Query: 446 IAAESHGHVGADLASLCSEAA 508
+AA + G GAD+A++C+EAA
Sbjct: 521 LAALTPGFAGADIANVCNEAA 541
Score = 65.7 bits (153), Expect = 3e-11
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A A E+G F I+G + M G S +R F+EA + +P+IIFIDE+DAI
Sbjct: 368 KTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIG 427
Query: 183 PKREK--THGEVERR-IVSQLLTLMDG 254
R + G ER ++QLL MDG
Sbjct: 428 RARGRGGLGGNDERESTLNQLLVEMDG 454
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT M L +DV+LE+
Sbjct: 328 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFV 387
Query: 452 AESHGHVGADLASLCSEAACSRFVRRWISLT 544
GAD+ ++C+EA R + +T
Sbjct: 388 MTKDEFSGADIKAICTEAGLLALRERRMKVT 418
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+I+FIDE+DA+
Sbjct: 235 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG 294
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
KR H ER I +L L++
Sbjct: 295 TKRYDAHSGGEREIQRTMLELLN 317
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 74.9 bits (176), Expect = 4e-14
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K++ +IV+AATN P S+D AL R GRFDR I + PD GR +IL H + +DVD
Sbjct: 358 KQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVD 417
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
L IA + G GADLA+L + AA
Sbjct: 418 LMIIARGTPGFSGADLANLVNVAA 441
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++ARA+A E G FF +G E G +R F A K SP IIFIDE+DAI
Sbjct: 273 KTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIG 332
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R + + ++Q+L +DG
Sbjct: 333 GSRNPKDQQYMKMTLNQMLVELDG 356
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT M L +DV+LE+
Sbjct: 328 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFV 387
Query: 452 AESHGHVGADLASLCSEAACSRFVRRWISLT 544
GAD+ ++C+EA R + +T
Sbjct: 388 MTKDEFSGADIKAICTEAGLLALRERRMKVT 418
Score = 70.9 bits (166), Expect = 7e-13
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+I+FIDE+DA+
Sbjct: 235 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG 294
Query: 183 PKREKTHGEVERRIVSQLLTLMD 251
KR + ER I +L L++
Sbjct: 295 TKRYDANSGGEREIQRTMLELLN 317
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL--EQ 445
V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+ K +KL + ++
Sbjct: 467 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQR 526
Query: 446 IAAESHGHVGADLASLCSEAA 508
+AA + G GAD+A++C+EAA
Sbjct: 527 LAALTPGFAGADIANVCNEAA 547
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A A E+ F I+G + M G S +R F+EA + +P+IIFIDE+DAI
Sbjct: 373 KTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIG 432
Query: 183 PKREK---THGEVERR-IVSQLLTLMDG 254
R + + G ER ++QLL MDG
Sbjct: 433 RARGRGGFSGGNDERESTLNQLLVEMDG 460
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/78 (44%), Positives = 51/78 (65%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R+EIL+IH + ++D E I
Sbjct: 279 VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIV 338
Query: 452 AESHGHVGADLASLCSEA 505
G GADL ++C+EA
Sbjct: 339 KLGEGFNGADLRNICTEA 356
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+DE+DAI
Sbjct: 186 KTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIG 245
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
+R E T + E +R + +LL +DG
Sbjct: 246 GRRFSEGTSADREIQRTLMELLNQLDG 272
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R++IL+IH + ++D E I
Sbjct: 279 VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIV 338
Query: 452 AESHGHVGADLASLCSEA 505
+ G GADL ++C+EA
Sbjct: 339 KLAEGFNGADLRNICTEA 356
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+DE+DAI
Sbjct: 186 KTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIG 245
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
+R E T + E +R + +LL +DG
Sbjct: 246 GRRFSEGTSADREIQRTLMELLNQLDG 272
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V V AAT+RP+ +DPAL R GR DR + P RLEIL + ++ + + DD+DLE IA
Sbjct: 981 VFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIA 1040
Query: 452 AESHGHVGADLASLCSEA 505
+ G GADL +L S+A
Sbjct: 1041 LMTEGFSGADLQALLSDA 1058
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT I A A F + GPE+++K G SE +R F +A +P I+F DE D+IA
Sbjct: 891 KTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA 950
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
PKR + V R+V+Q LT +DG
Sbjct: 951 PKRGHDNTGVTDRVVNQFLTELDG 974
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 72.1 bits (169), Expect = 3e-13
Identities = 36/100 (36%), Positives = 60/100 (60%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++ M L +DL+
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 443 QIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRL 562
+IA + +G GA+L ++C+EA R + +T +
Sbjct: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEM 398
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I
Sbjct: 208 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
Query: 183 PKREKT---HGEVE-RRIVSQLLTLMDG 254
R ++ +G+ E +R + +LL +DG
Sbjct: 268 SARMESGSGNGDSEVQRTMLELLNQLDG 295
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 72.1 bits (169), Expect = 3e-13
Identities = 36/100 (36%), Positives = 60/100 (60%)
Frame = +2
Query: 263 SSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLE 442
S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++ M L +DL+
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 443 QIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIRL 562
+IA + +G GA+L ++C+EA R + +T +
Sbjct: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEM 398
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I
Sbjct: 208 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
Query: 183 PKREKT---HGEVE-RRIVSQLLTLMDG 254
R ++ +G+ E +R + +LL +DG
Sbjct: 268 SARMESGSGNGDSEVQRTMLELLNQLDG 295
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 71.7 bits (168), Expect = 4e-13
Identities = 37/100 (37%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Frame = +2
Query: 266 SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LGDDV 433
++V+++ TNR + +D AL R GR + +++I +PD GRL+IL+IHT MK LG D+
Sbjct: 362 NNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDI 421
Query: 434 DLEQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRT 553
+L+++AA + + GA+L + ++A S + R +S+ T
Sbjct: 422 NLQELAARTKNYSGAELEGVV-KSATSYALNRQLSMDDLT 460
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 KTLIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA--------II 155
KTL+AR + G ++NGPE++SK GE+E N+R F +A+++ +I
Sbjct: 263 KTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVI 322
Query: 156 FIDELDAIAPKREKTHG--EVERRIVSQLLTLMDG 254
DE+DAI R T V IV+QLLT +DG
Sbjct: 323 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 357
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 71.3 bits (167), Expect = 5e-13
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVAN T A F + G E + K GE +R F A +N+PAIIFIDE+DAIA
Sbjct: 202 KTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIA 261
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
R +T + E +RI+ +LL MDG
Sbjct: 262 TARFDAQTGADREVQRILMELLNQMDG 288
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +2
Query: 269 HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 448
+V V+ ATNR +++DPAL R GR DR+I+ +PD + + ++ T M L D+VDLE
Sbjct: 294 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDY 353
Query: 449 AAESHGHVGADLASLCSEA 505
+ A++A++C EA
Sbjct: 354 VSRPDKISAAEIAAICQEA 372
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA+E+ A FF ++ + SK GE+E ++ F+ A P++IF+DE+D+I
Sbjct: 262 KTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIM 321
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
R + E RR+ S+ L DG
Sbjct: 322 STRSTSENEASRRLKSEFLIQFDG 345
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLEQI 448
VI++ ATN+P +D A+ R R + I + +PD+ R + + K D D+++I
Sbjct: 354 VIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKI 411
Query: 449 AAESHGHVGADLASLCSEAA 508
E+ G+ G+DL +LC EAA
Sbjct: 412 VKETEGYSGSDLQALCEEAA 431
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
VI + ATNRP+ +D R GR DR + IG+PDA R++I +H+ L +D+D ++
Sbjct: 636 VIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLV 695
Query: 452 AESHGHVGADLASLCSEAA 508
+ G GAD+ +L +EAA
Sbjct: 696 FRTVGFSGADIRNLVNEAA 714
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 179
KTL AR +A E+G F +G E S+ +G ++ N + F A +N+PA +F+DE+DAI
Sbjct: 539 KTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKIN--EMFSIARRNAPAFVFVDEIDAI 596
Query: 180 APKREKTHGEVERRIVSQLLTLMDG 254
A + + R L+ +DG
Sbjct: 597 AGRHARKDPR-RRATFEALIAQLDG 620
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 266 SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQ 445
+ V+V+AATNRP+ +D A+ R R + +IGIPD R EIL++ K ++ D+D +
Sbjct: 222 ARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDH 279
Query: 446 IAAESHGHVGADLASLCSEAA 508
IA G+ G+D+ LC +AA
Sbjct: 280 IARLCEGYTGSDIFELCKKAA 300
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+A E+GA F + +MSK G+++ + F A K PAIIFIDE+++
Sbjct: 132 KTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFL 191
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
+R T E + ++ + L DG
Sbjct: 192 GQRRSTDHEAMANMKTEFMALWDG 215
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+ANE GA F ++ I SK GE E N+R F A K SP IIF+DE+D++
Sbjct: 461 KTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSML 520
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
+R + E R+I ++ +T DG
Sbjct: 521 GQRTRVGEHEAMRKIKNEFMTHWDG 545
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
++V+AATNRP +D A+ R RF+R I +G+P R +ILR K +++D +++A
Sbjct: 554 ILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILRTLLSKEKT-ENLDFQELA 610
Query: 452 AESHGHVGADLASLCSEAA 508
+ G+ G+DL + C+ AA
Sbjct: 611 QMTDGYSGSDLKNFCTTAA 629
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +2
Query: 278 VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAE 457
V+AATNR + +DPAL R GR DR+I+ P R IL+IH++ M + DV+ E++A
Sbjct: 313 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS 372
Query: 458 SHGHVGADLASLCSEA 505
+ GA L ++C EA
Sbjct: 373 TDDFNGAQLKAVCVEA 388
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARA A +T A F + GP+++ G+ +R AF+ A + +P IIFIDE+DAI
Sbjct: 218 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIG 277
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
KR + G+ E +R + +LL +DG
Sbjct: 278 TKRFDSEVSGDREVQRTMLELLNQLDG 304
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
K+ +A+AVA E + FF ++ +++SK GESE + FE A +++P+IIF+DE+D++
Sbjct: 178 KSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLC 237
Query: 183 PKR-EKTHGEVERRIVSQLLTLMDG 254
R E E RRI ++LL M G
Sbjct: 238 GTRGEGNESEASRRIKTELLVQMQG 262
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLEQI 448
V+V+AATN P ++D A+RR RFD+ I I +P+A R + ++H + + D E +
Sbjct: 270 VLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYL 327
Query: 449 AAESHGHVGADLASLCSEAACSRFVRR 529
++ G G+D+ S+C + VR+
Sbjct: 328 GQKTEGFSGSDV-SVCVKDVLFEPVRK 353
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +2
Query: 248 GWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN--MKL 421
G+ +S V+V+ ATNR + +DPAL R GRFD+ I +G+P GRL IL++H +N +
Sbjct: 449 GFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRS 508
Query: 422 GDDVD--LEQIAAESHGHVGADLASLCSEA 505
D+ + L+++A + GA+L ++ +EA
Sbjct: 509 EDEKEELLQEVAENTEDFTGAELQNVLNEA 538
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E G FF NG + + G + S ++ F + +P+IIFIDE+DAI
Sbjct: 362 KTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIG 421
Query: 183 PKR---EKTHGEVER-RIVSQLLTLMDG 254
KR + G ER + + Q+LT MDG
Sbjct: 422 SKRGGPDIGGGGAEREQGLLQILTEMDG 449
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +2
Query: 278 VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAE 457
V+AATNR + +DPAL R GR DR+I+ P R IL+IH++ M + DV+ E++A
Sbjct: 312 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARS 371
Query: 458 SHGHVGADLASLCSEA 505
+ GA L ++C EA
Sbjct: 372 TDDFNGAQLKAVCVEA 387
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+ARA A +T A F + GP+++ G+ +R AF A + SP IIFIDE+DAI
Sbjct: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIG 276
Query: 183 PKR--EKTHGEVE-RRIVSQLLTLMDG 254
KR + G+ E +R + +LL +DG
Sbjct: 277 TKRFDSEVSGDREVQRTMLELLNQLDG 303
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 67.3 bits (157), Expect = 9e-12
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K V+V+AATNRP +D A+ R R R + + +PDAT R +IL + ++ DVD
Sbjct: 1099 KDRERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDATNRSKILSVILAKEEIAPDVD 1156
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
LE IA + G+ G+DL +LC AA
Sbjct: 1157 LEAIANMTDGYSGSDLKNLCVTAA 1180
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E GA F I+ I SK GE E ++ F A K +P++IF+DE+D++
Sbjct: 1011 KTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSML 1070
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
+RE E R++ ++ + DG
Sbjct: 1071 GRRENPGEHEAMRKMKNEFMVNWDG 1095
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+ IF+DE+DAI
Sbjct: 158 KTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAII 217
Query: 183 PKR---EKTHGEVERRIVSQLLTLMDG 254
+R ++ E RR+ ++LL MDG
Sbjct: 218 SQRGGEGRSEHEASRRLKTELLIQMDG 244
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/106 (28%), Positives = 50/106 (47%)
Frame = +2
Query: 233 VIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 412
+I G K + V V+AATN P +D A+ R R ++ I + +PD R + + +
Sbjct: 239 LIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPS 296
Query: 413 MKLGDDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSR 550
+ + + + +S G+ G+D+ LC EAA R L R
Sbjct: 297 QPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDR 342
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+ IF+DE+DAI
Sbjct: 149 KTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAII 208
Query: 183 PKR---EKTHGEVERRIVSQLLTLMDG 254
+R ++ E RR+ ++LL MDG
Sbjct: 209 SQRGGEGRSEHEASRRLKTELLIQMDG 235
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/106 (28%), Positives = 50/106 (47%)
Frame = +2
Query: 233 VIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 412
+I G K + V V+AATN P +D A+ R R ++ I + +PD R + + +
Sbjct: 230 LIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPS 287
Query: 413 MKLGDDVDLEQIAAESHGHVGADLASLCSEAACSRFVRRWISLTSR 550
+ + + + +S G+ G+D+ LC EAA R L R
Sbjct: 288 QPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDR 333
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K S ++++ ATNRP +D A+ R R R I + +PDA RL+IL+I L D
Sbjct: 487 KDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTPENLESDFQ 544
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
E++A E+ G+ G+DL +LC AA
Sbjct: 545 FEKLAKETEGYSGSDLKNLCIAAA 568
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E GA F I G + SK G++E + F A K +P IIF+DE+D++
Sbjct: 399 KTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLL 458
Query: 183 PKR-EKTHGEVERRIVSQLLTLMDG 254
R + E RR+ ++ + DG
Sbjct: 459 GARGGSSEHEATRRMRNEFMAAWDG 483
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR K+ +++D
Sbjct: 656 KPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAKEKVDENLD 713
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
+++A + G+ G+DL +LC+ AA
Sbjct: 714 YKELAMMTEGYTGSDLKNLCTTAA 737
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+A E GA F ++ I SK GE E N+R F A K SP IIF+DE+D++
Sbjct: 568 KTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSML 627
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
+R + E R+I ++ ++ DG
Sbjct: 628 GQRTRVGEHEAMRKIKNEFMSHWDG 652
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR K+ +++D
Sbjct: 651 KPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAKEKVDENLD 708
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
+++A + G+ G+DL +LC+ AA
Sbjct: 709 YKELAMMTEGYTGSDLKNLCTTAA 732
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+A E GA F ++ I SK GE E N+R F A K SP IIF+DE+D++
Sbjct: 563 KTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSML 622
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
+R + E R+I ++ ++ DG
Sbjct: 623 GQRTRVGEHEAMRKIKNEFMSHWDG 647
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+AVA E G FF ++ + SK GESE +R F+ A +P+ IFIDE+D++
Sbjct: 285 KTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLC 344
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
R + E RR+ S+LL +DG
Sbjct: 345 NSRGGSGEHESSRRVKSELLVQVDG 369
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/96 (34%), Positives = 57/96 (59%)
Frame = +2
Query: 272 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 451
V+V+AATN P ID ALRR R ++ I I +PD R ++ I+ + +++ DV++E +A
Sbjct: 384 VMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVA 441
Query: 452 AESHGHVGADLASLCSEAACSRFVRRWISLTSRTIR 559
+ G+ G DL ++C +A+ + R+ T I+
Sbjct: 442 RRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIK 477
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K V+V+AATNRP +D A+ R R R + + +PD+ R +IL + ++ +DVD
Sbjct: 1086 KDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAKEEMAEDVD 1143
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
LE IA + G+ G+DL +LC AA
Sbjct: 1144 LEAIANMTDGYSGSDLKNLCVTAA 1167
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E GA F I+ I SK GE E ++ F A K +P++IF+DE+D++
Sbjct: 998 KTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSML 1057
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
+RE E R++ ++ + DG
Sbjct: 1058 GRRENPGEHEAMRKMKNEFMINWDG 1082
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT+I +A+A E A FF I+ + SK GE E +R F A PA+IF+DE+D++
Sbjct: 56 KTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLL 115
Query: 183 PKREKTHGEVE--RRIVSQLLTLMDG 254
+R K+ GE E RR+ +Q L M+G
Sbjct: 116 SQR-KSDGEHESSRRLKTQFLIEMEG 140
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Frame = +2
Query: 233 VIDAYGWLKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 412
+I+ G+ S ++++ ATNRP +D A RR R + + I +P + R I++ K
Sbjct: 135 LIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQNLLKK 192
Query: 413 ---MKLGDDVDLEQIAAESHGHVGADLASLCSEAACS---RFVRRWISLTSRT 553
L DD D+ I + G+ G+D+ +L +A ++R I +T+ T
Sbjct: 193 DGLFTLSDD-DMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLT 244
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL 439
+ V+V+AATNRP +D A+ R R + +G+PDA R +IL++ L D D+
Sbjct: 860 EKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDI 917
Query: 440 EQIAAESHGHVGADLASLCSEAACSRFV 523
+++A+ ++G+ G DL +LC AA R +
Sbjct: 918 DEVASMTNGYSGNDLKNLCVTAARRRII 945
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E GA LIN MS+ E E ++ F A K SP+IIF+DE++++
Sbjct: 783 KTMLAKAVATEAGAN--LINMS--MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESML 838
Query: 183 PK-REKTHGE 209
+ R KT E
Sbjct: 839 HRYRLKTKNE 848
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/83 (36%), Positives = 53/83 (63%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL 439
+++ V+V+AATNRP+ +D A+ R RF + +IG+PD R +IL++ K + D++
Sbjct: 223 QNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKVVLKGESVESDINY 280
Query: 440 EQIAAESHGHVGADLASLCSEAA 508
++IA + G+D+ LC +AA
Sbjct: 281 DRIARLCEDYTGSDIFELCKKAA 303
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+A+A E+ A F + +MSK G+++ + F A K PAIIFIDE+D+
Sbjct: 135 KTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFL 194
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
+R T E + ++ + L DG
Sbjct: 195 GQRRSTDNEAMSNMKTEFMALWDG 218
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 64.1 bits (149), Expect = 8e-11
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
++ V+V+AATNRP +D A+ R R R + +G+PD + R IL++ L D+D
Sbjct: 956 QERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLD 1013
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
+ +IA+ ++G+ G+DL +LC AA
Sbjct: 1014 IGEIASMTNGYSGSDLKNLCVTAA 1037
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KT++A+AVA E A F I+ I SK GE E ++ F A K SP++IF+DE+D++
Sbjct: 868 KTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSML 927
Query: 183 PKRE-KTHGEVERRIVSQLLTLMDG 254
+RE E R+I ++ + DG
Sbjct: 928 GRREHPREHEASRKIKNEFMMHWDG 952
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
K S ++++ ATNRP +D A+ R R R I + +PDA RL+IL+I L +
Sbjct: 286 KDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTPENLETGFE 343
Query: 437 LEQIAAESHGHVGADLASLCSEAA 508
+++A E+ G+ G+DL +LC AA
Sbjct: 344 FDKLAKETEGYSGSDLKNLCIAAA 367
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
KTL+A+A+A E GA F I G + SK G++E + F A K +P IIF+DE+D++
Sbjct: 198 KTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLL 257
Query: 183 PKREKT-HGEVERRIVSQLLTLMDG 254
R E RR+ ++ + DG
Sbjct: 258 GARGGAFEHEATRRMRNEFMAAWDG 282
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPAIIFIDELDAI 179
KT AR +AN+ G + +MSK GESE L F +A++ AIIF+DE+DA
Sbjct: 374 KTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDGAIIFLDEIDAF 433
Query: 180 APKREKTHGEVERRIVSQLLTLMDG 254
A R+ E RR++S LL +DG
Sbjct: 434 AISRDSEMHEATRRVLSVLLRQIDG 458
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 436
++ V+V+AATNR +DPAL RFD I +PD R EI+ + K + +
Sbjct: 460 EQEKKVVVIAATNRKQDLDPAL--ISRFDSMIMFDLPDLQTRQEIIAQYAKQL---SKPE 514
Query: 437 LEQIAAESHGHVGADLASLCSEA 505
L Q+A + G D+ +C A
Sbjct: 515 LVQLAQATEAMSGRDIRDVCQGA 537
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPAIIFIDELDAI 179
KT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N ++FIDE DA
Sbjct: 383 KTMVAREIARKSGLDYAMMTGGDV-APLGSQAVTKIHQIFDWAKKSNKGLLLFIDEADAF 441
Query: 180 APKREKTH-GEVERRIVSQLL 239
+R T+ E +R ++ LL
Sbjct: 442 LCERNSTYMSEAQRSALNALL 462
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPAIIFIDELDAI 179
KT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N ++FIDE DA
Sbjct: 398 KTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSNKGLLLFIDEADAF 456
Query: 180 APKREKTH-GEVERRIVSQLL 239
+R T+ E +R ++ LL
Sbjct: 457 LCERNSTYMSEAQRSALNALL 477
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDD 430
+S ++++ ATNRP +D A+ R D I+ +P R ++L+++ +GDD
Sbjct: 483 QSRDIVLVLATNRPGDLDSAVT--DRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDD 537
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKL-AGESESNLRKAFEEADKNSPAIIFIDELDAI 179
KT +A A+A E + E+ + L G+S +N+R+ F+ A +P IIF+++ D
Sbjct: 470 KTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLF 529
Query: 180 APKREK---THGEVERRIVSQLLTLMDG 254
A R K T + ++QLL +DG
Sbjct: 530 AGVRGKFVHTKQQDHESFINQLLVELDG 557
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR---IHTKNMKLGD 427
+K V++MA T ID ALRR GR DR + P R IL T + +L D
Sbjct: 559 EKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERILHNAAEETMDRELVD 618
Query: 428 DVDLEQIAAES 460
VD +++ ++
Sbjct: 619 LVDWRKVSEKT 629
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII-FIDELDAI 179
KT+ AR +A +G + L+ G ++ + L ++ + + + F+ + K+ ++ FIDE DA
Sbjct: 411 KTMAARELARRSGLDYALMTGGDV-APLGAQAVTKIHQLFDWSKKSKRGLLLFIDEADAF 469
Query: 180 APKREKTH-GEVERRIVSQLL 239
+R KT+ E +R ++ LL
Sbjct: 470 LCERNKTYMSEAQRSALNALL 490
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 403
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 496 QSKDIVLALATNRPGDLDSAVA--DRIDETLEFPLPGEEERFKLLNLY 541
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII-FIDELDAI 179
KT+ AR +A ++G + L+ G ++ + L ++ + + + F+ K+ ++ FIDE DA
Sbjct: 410 KTMAARELARKSGLDYALMTGGDV-APLGAQAVTKIHELFDWGKKSKRGLLLFIDEADAF 468
Query: 180 APKREKTH-GEVERRIVSQLL 239
+R KT+ E +R ++ LL
Sbjct: 469 LCERNKTYMSEAQRSALNALL 489
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 260 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 403
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 495 QSKDIVLALATNRPGDLDSAVA--DRVDEVLEFPLPGEEERFKLLNLY 540
>At2g41860.2 68415.m05174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 530
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 96 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 254
++ +L+KAF DKN I I+EL DA+A + T EV I+ + T DG
Sbjct: 428 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDG 481
>At2g41860.1 68415.m05173 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 425
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 96 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 254
++ +L+KAF DKN I I+EL DA+A + T EV I+ + T DG
Sbjct: 323 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDG 376
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 93 ESESNLRKAFEEADKNSPAIIFIDELDA 176
ES NL KAF+ DK+S I IDEL++
Sbjct: 464 ESNENLYKAFQHFDKDSSGYITIDELES 491
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 30.7 bits (66), Expect = 0.93
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEADKNSPA----IIFID 164
KTL+A+ +A F + + + + GE ES L K AD N A I++ID
Sbjct: 236 KTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYID 295
Query: 165 ELDAIAPKREKTH--GEVERRIVSQ-LLTLMDG 254
E+D I K E + +V V Q LL +++G
Sbjct: 296 EVDKITKKAESLNISRDVSGEGVQQALLKMLEG 328
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 414 MFLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITITW 268
+ L CMR+ S +P S+R R AGS RF+ + + W
Sbjct: 174 LVLACMRKTSNPDELPSLPNQNRSSSRSSRLMAGSRGDSRFLWLVMVIW 222
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 515 RFVRRWISLTSRTIRLTQRFSILWLSPW 598
RFV+RW+ + S RLT +W+S W
Sbjct: 445 RFVKRWVEILSEP-RLTHEIRGIWISYW 471
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 78 SKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 179
+K GE E L+K EE ++ I+FIDE+ +
Sbjct: 345 TKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTL 378
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 78 SKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 179
+K GE E L+K EE ++ I+FIDE+ +
Sbjct: 366 TKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTL 399
>At5g44320.1 68418.m05427 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 588
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 338 FDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEAACSR 517
+DR D P A RLE + + + DD+ + ++A E V A A L + R
Sbjct: 220 YDRSFDRITPKADRRLERFKNRSFKVTTSDDLVIRRLAKEDKATVFATDAILAALMCAPR 279
Query: 518 FVRRW 532
V W
Sbjct: 280 SVYSW 284
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 54 LINGPEIMSKLAGESESNLRKAFEEADKNS--PAIIFIDELDAIAPKREKTHGEVERRI 224
+I G ++ S + E+E +RK+ E D +S P ++F+ ++ AI K G R+
Sbjct: 367 IIGGDDVDSSVLAEAEL-VRKSIEACDSSSDSPCVVFVSKMFAIPMKMIPQDGNHRERM 424
>At1g61950.1 68414.m06988 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GI:3283996 from [Nicotiana tabacum]; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 551
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 182
K L+ A + G ++ M++ E E NL KAF+ DK++ I EL+
Sbjct: 442 KQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAM 501
Query: 183 PKREKTHGEVERRIVSQLLTLMDG 254
+ + + I+S++ DG
Sbjct: 502 KEYNMGDDIMIKEIISEVDADNDG 525
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 KTLIARAVANETGAFFFLINGPEIMSK--LAGESESNLRKAFEEADKNSPA----IIFID 164
KTL+A+ +A F + + + + + ES L K A+ N A I++ID
Sbjct: 321 KTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYID 380
Query: 165 ELDAIAPKREKTH--GEVERRIVSQ-LLTLMDG 254
E+D I K E + +V V Q LL L++G
Sbjct: 381 EVDKITKKAESLNISRDVSGEGVQQALLKLLEG 413
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 93 ESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD 251
ES N+ KAF+ DK+ I DEL+A K +G + + ++L+ +D
Sbjct: 446 ESNENVYKAFQHFDKDGSGYITTDELEAAL----KEYGMGDDATIKEILSDVD 494
>At2g34440.1 68415.m04225 MADS-box family protein similar to
SP|Q9XGJ4 MADS box protein GGM13 {Gnetum gnemon};
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain)
Length = 172
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 LINGPEIMSKLAGE-SESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRI 224
L+N K GE S+ L A +E K S + +DEL+ + + HG +E ++
Sbjct: 100 LLNQEVEAEKERGEKSQEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQV 157
>At1g05990.1 68414.m00627 calcium-binding protein, putative strong
similarity to calcium-binding protein [Lotus japonicus]
GI:18413495; contains INTERPRO:IPR002048 calcium-binding
EF-hand domain
Length = 150
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 93 ESESNLRKAFEEADKNSPAIIFIDELDAI 179
E E ++++AF D+N I +DEL A+
Sbjct: 75 EEEEDMKEAFNVFDQNGDGFITVDELKAV 103
>At4g08480.1 68417.m01399 mitogen-activated protein kinase, putative
similar to mitogen-activated protein kinase [Arabidopsis
thaliana] gi|1255448|dbj|BAA09057; contains Pfam
PF00069: Protein kinase domain
Length = 773
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 208 KWKDVSFHSY*RLWMAEEVVPR-DRDGGHEPAELHRPGAAAL 330
K D+ WMA EV+ R D DG PA++ G L
Sbjct: 650 KLNDIKSRKETLFWMAPEVINRKDNDGYRSPADIWSLGCTVL 691
>At1g21550.1 68414.m02695 calcium-binding protein, putative contains
similarity to calcium-binding protein GB:CAB63264
GI:6580549 from [Lotus japonicus]
Length = 155
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 102 SNLRKAFEEADKNSPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTL 245
++LR+ F+ DKN ++ +DEL I K E T E+E + Q L L
Sbjct: 9 NDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDL 59
>At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1132
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI-LRIHTKNMKLGDDVDLE 442
S ++ ++P S P+LR E + + TGRLEI + + DD D+
Sbjct: 750 SSLLDKTVEHKPESTSPSLRTVEEDSMEPEDALASETGRLEISSKTEIQEEATKDDPDM- 808
Query: 443 QIAAESHGHVGADLASLCSEAACSRFVRRWISLTSRTIR 559
H G D S E+A R+ S T++
Sbjct: 809 ------HSRHGEDPLSDHLESAAGEAAARYNSALDMTLK 841
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 15 ARAVANETGAFFFLI--NGPEIMSKLAGESESNLRKAFEEADKNSPAII 155
AR+ + TG FF I + S+ E N+ + F E D+NSPA++
Sbjct: 53 ARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYE-FNEGDRNSPAVL 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,189
Number of Sequences: 28952
Number of extensions: 237202
Number of successful extensions: 950
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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