Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0742.Seq
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    31   0.006
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.37 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 31.5 bits (68), Expect = 0.006
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 107 KEFVRPVHDAHVHDEFERFKVKLQKQY-ASDLEHEKRLNIFRQSL 238
           K F +   +A V  E  R  +++ + Y ASDLE E RL  FR+ L
Sbjct: 157 KVFAKAREEATVVPEGSRTPIEIPRDYTASDLEEEHRLAYFREDL 201


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 527 TARPPPPHVPNDQHEPNTN*SLTGVTAPN 441
           +A+P P   PN  ++P TN  LT +T P+
Sbjct: 337 SAQPTPSQSPNQIYQPVTN--LTNLTYPS 363


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 603 LFPKPQEQSMSACWL 559
           LF + Q QSM  CW+
Sbjct: 182 LFEEKQVQSMPQCWI 196


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 527 TARPPPPHVPNDQHEPNTN 471
           T  PPPP   +D + P  N
Sbjct: 212 TIPPPPPEEDDDSNIPQNN 230


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 515 PPPHVPNDQHEPN 477
           PPP  P D +EP+
Sbjct: 90  PPPDEPIDDYEPS 102


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 41  SNMQCTGFPGPGSRHFATFNPMKEFVRPVHDAHV 142
           S+MQ    P P + H A  +P        HD  V
Sbjct: 112 SHMQFMQLPHPAAAHSALLSPAMPHNLTRHDGSV 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,529
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)