Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0742.Seq
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 49 3e-06
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 46 2e-05
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 45 5e-05
SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 42 4e-04
SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_54627| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49960| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_28340| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 37 0.014
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 34 0.10
SB_37788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_4269| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_1137| Best HMM Match : CC (HMM E-Value=2) 31 0.72
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_33598| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32) 29 2.2
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 29 2.2
SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19) 29 2.2
SB_53670| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 29 3.8
SB_51909| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 29 3.8
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 29 3.8
SB_46267| Best HMM Match : zf-GRF (HMM E-Value=0.0093) 29 3.8
SB_21664| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.38) 29 3.8
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 3.8
SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_6680| Best HMM Match : Astacin (HMM E-Value=0) 28 5.1
SB_59160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_12085| Best HMM Match : TBP (HMM E-Value=3.5e-35) 27 8.8
SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_14739| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 87.8 bits (208), Expect = 6e-18
Identities = 47/106 (44%), Positives = 65/106 (61%)
Frame = +1
Query: 187 RERPGAREEAEHLQAVAQIHTFHNRANRGFTMSVNHLADRTDDELAALRGRRYSGPSPHG 366
+E RE +H + IH+ NR + G+ +++NHL DR+D EL LRGRRY+ G
Sbjct: 571 KEHHTRREHFKH--NLRFIHS-KNRRHAGYYLAMNHLGDRSDKELRVLRGRRYTKGYNGG 627
Query: 367 LPFPYSKSRVEELSVKLPPEHDWRLFGAVTPVKDQLVFGSCWSFGT 504
LP+ + + ++ P E +W + GAVTPVKDQ V GSCWSFGT
Sbjct: 628 LPYKPDMASINDV----PDEMNWVIRGAVTPVKDQAVCGSCWSFGT 669
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 23 DVFKVDSNMQCTGFPGPGSRHFATF--NPMKEFVRPVHDAHVHDEFERFKVKLQKQYASD 196
+VF+ + CTGFPGPG + NPM+EFV + VH F+++ K +K Y +
Sbjct: 511 EVFQTPEGLVCTGFPGPGDDDEKSIINNPMQEFVEMHNVEKVHRVFDKYVKKHKKNYKDN 570
Query: 197 LEHEKRLNIFRQSLRYIHSIIERTA 271
EH R F+ +LR+IHS R A
Sbjct: 571 KEHHTRREHFKHNLRFIHSKNRRHA 595
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
+EG LFL K +L LSQQ L+DCSWG GN
Sbjct: 673 IEGTLFL-KTKYLTRLSQQNLMDCSWGEGN 701
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 253 HNRANRGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSR--VEELSVKLPPE 426
HN FT+++NHL D T DE Y+G H + + + V++P
Sbjct: 281 HNAEGHSFTLAMNHLGDLTQDEFRYF----YTGMRSHYSNYTKKQGSAFLAPSHVQVPDT 336
Query: 427 HDWRLFGAVTPVKDQLVFGSCWSFGT 504
DWR G VTPVK+Q GSCW+F T
Sbjct: 337 VDWRKEGYVTPVKNQGQCGSCWAFST 362
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
+EG F K G L LS+Q L+DCS +GN
Sbjct: 366 LEGQNF-KKTGKLVSLSEQNLVDCSTAYGN 394
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 253 HNRANRGFTMSVNHLADRTDDELA----ALRGRRYSGPSPHGLPFPYSKSRVEELSVKLP 420
HN F +++NHL D T E++ L+ ++++ P G F + +VK+
Sbjct: 63 HNEGKHSFKLAMNHLGDMTSLEISQTLLGLKLKKHAESQPKGATF------LPPANVKVV 116
Query: 421 PEHDWRLFGAVTPVKDQLVFGSCWSFGT 504
DWR G VTPVK+Q GSCW+F T
Sbjct: 117 DSIDWRSKGYVTPVKNQGQCGSCWAFST 144
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
+EG F K G L LS+Q L+DCS +GN
Sbjct: 148 LEGQHF-RKTGKLVSLSEQNLVDCSGKYGN 176
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +1
Query: 277 TMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAVT 456
++ NH+AD TD E+ ++G + P G P+S ++ V LPP DWR GAV
Sbjct: 455 SLKPNHMADMTDAEVNRMKGLLHEEPPLIG-DSPFSIPD-KDRGVPLPPHVDWRKAGAVN 512
Query: 457 PVKDQLVFGSCWSF 498
VK Q + GSC++F
Sbjct: 513 SVKSQGICGSCYAF 526
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
+ NPM EF H V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 1173 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 1232
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
+EGA F+ G L LS+Q ++DC+WGFGN
Sbjct: 532 LEGAHFIQTGLKLD-LSEQQIVDCTWGFGN 560
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 152 FERFKVKLQKQYASDLEHEKRLNIFRQSL 238
F FK +K+Y S EHEKR +I+R ++
Sbjct: 426 FNTFKASYRKRYPSAHEHEKRKDIYRHNM 454
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 1294 NRRSLPYKLEPNHFADLTDDEFKSYKG 1320
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
+ NPM EF H + V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 23 SINPMAEFTSLGHSSDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 82
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 79 NRRSLPYKLEPNHFADLTDDEFKSYKG 105
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 DPDVFKVDSNMQCTGFPGPGSRHFATFNPMKEFVRPVH-DAHVHDEFERFKVKLQKQYAS 193
D D F++ +C RHF + NPM+EF+ D + + +++ + KQY S
Sbjct: 216 DLDRFELPKGSECYNLSHSFDRHFVS-NPMQEFMSYGKVDFAIERMYRKYQGQHNKQYDS 274
Query: 194 DLEHEKRLNIFRQSLRYIHSI 256
+ E KR +IFR ++RYI SI
Sbjct: 275 EHEVSKRKHIFRHNMRYIRSI 295
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
VEGA F+ K G L LS Q +IDCSWG GN
Sbjct: 345 VEGAYFM-KTGKLKELSAQQVIDCSWGSGN 373
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
T NPM EF + V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 23 TINPMAEFTSLGYSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRRS 82
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
+ NPM EF V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 122 SINPMAEFTSLGQSRELVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 181
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 178 NRRSLPYKLEPNHFADLTDDEFKSYKG 204
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
+ NPM EF V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 23 SINPMAEFTSLGQSRDPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 82
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPP-EHD 432
NR + + + +NH D TDDE + +G + + ++++ + E D
Sbjct: 79 NRRSLPYKLELNHFPDLTDDEFKSYKGAL--DDESKDVMNDHDDVIDDDVNDETQEDEED 136
Query: 433 WRLFGAVTPVKDQLVFGSCWSFGT 504
GAV P K Q GSCW+F T
Sbjct: 137 EPSDGAVNPAKGQGTCGSCWAFAT 160
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSI 256
+ NPM EF V D+F+ F+ + K Y D EH +R +IFR ++RYI S+
Sbjct: 194 SINPMAEFTSLGQSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSM 249
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 250 NRCSLPYKLEPNHFADLTDDEFKSYKG 276
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 137 HVHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
H+ D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 481 HLDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 524
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 521 NRRSLPYKLEPNHFADLTDDEFKSYKG 547
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 280 MSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYS-KSRVEELSVKLPPEHDWRLFGAVT 456
M++NHL D T+DE Y G H + + +VK+P DW G VT
Sbjct: 1 MAMNHLGDLTEDEFRYF----YLGVRAHHNSTKRGWATYMPPSNVKIPSSVDWSQKGYVT 56
Query: 457 PVKDQLVFGSCWSFGT 504
VK+Q GSCW+F T
Sbjct: 57 GVKNQGQCGSCWAFST 72
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
VEG F K G L LS+Q LIDCS +GN
Sbjct: 76 VEGQHF-RKTGSLVSLSEQNLIDCSGSYGN 104
>SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
+ NPM EF V D+F+ F+ + K D EH +R +IFR ++RYI S+ R+
Sbjct: 43 SINPMAEFTSLGQSRDLVDDDFDEFRQQHDKVCEDDSEHRRRKHIFRHNVRYIRSMNRRS 102
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 99 NRRSLPYKLEPNHFADLTDDEFKSYKG 125
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2
Query: 140 VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
V D+F+ F+ + K Y D EH +R +IFR ++RYI S+ R+
Sbjct: 1282 VDDDFDEFRQQHDKMYEDDSEHCRRKHIFRHNVRYIRSMNRRS 1324
>SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLR 241
+ NPM EF H V D+F+ F+ + K Y D EH +R +IFR ++R
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVR 73
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 253 HNRANRGFTMSVNHLADRTDDELAA-LRGRRYSGPSPHGLPF-PYSKSRVEELSVKLPPE 426
HN N + + +NH AD T E G R + S G F P S +V+LP E
Sbjct: 214 HNAENHSYKLDMNHFADLTVTEFKQRFMGYRAASNSTGGSTFLPLS-------NVQLPAE 266
Query: 427 HDWRLFGAVTPVKDQ 471
DWR G VT VK+Q
Sbjct: 267 VDWRDKGFVTAVKNQ 281
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 512 VEGALFLHKGGHLXWLSQQALIDCSWGFGN 601
+EG F K G L LS+Q L+DCS +GN
Sbjct: 357 LEGQHF-RKTGKLVSLSEQNLVDCSKKYGN 385
>SB_54627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSL 238
+ NPM EF H V D+F+ F+ + K Y D EH +R +IFR ++
Sbjct: 26 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 75
>SB_49960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSL 238
+ NPM EF H V D+F+ F+ + K Y D EH +R +IFR ++
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 72
>SB_28340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSL 238
+ NPM EF H V D+F+ F+ + K Y D EH +R +IFR ++
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFQQQHDKVYEDDSEHRRRKHIFRHNV 72
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 92 TFNPMKEFVRPVHDAH-VHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLR 241
+ NPM EF V D+F+ F+ + K Y D EH +R +IFR + +
Sbjct: 660 SINPMPEFTSLGQSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNTK 710
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 152 FERFKVKLQKQYASDLEHEKRLNIFRQSLR 241
F FK +K+Y S EHEKR +I+R ++R
Sbjct: 298 FNAFKASYRKRYPSAHEHEKRKDIYRHNMR 327
>SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 273 TAVRSIMECMYLSDCLKMFSL-FSCSRSLAYCFWSLTLKRSNSSWT-WASCTGRTNSFIG 100
T+ S+ YL++ L + + F +L+Y + L+++ S W+ W+ CT +
Sbjct: 187 TSANSMSAIRYLANILPLILVGFGFLVALSYVYKELSVEGGYSEWSNWSVCTRSCGQGLR 246
Query: 99 LKVAKCREPGPG 64
++ +C +P PG
Sbjct: 247 GRIRRCDKPIPG 258
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 542 GHLXWLSQQALIDCSWGFGN 601
G L S+Q L+DCSWGFGN
Sbjct: 53 GKLKDFSEQQLLDCSWGFGN 72
>SB_37788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 146 DEFERFKVKLQKQYASDLEHEKRLNIFRQSL 238
D+F+ F+ + K Y D EH +R +IFR ++
Sbjct: 3 DDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 33
>SB_4269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 143 HDEFE-RFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERT 268
HD + F+ + K Y D +H + +IFR ++RYI S+ R+
Sbjct: 37 HDPVDDEFREQHDKVYEDDSKHHRLKHIFRHNVRYIRSMNRRS 79
>SB_1137| Best HMM Match : CC (HMM E-Value=2)
Length = 410
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 128 HDAHVHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHS 253
+D + + +K K K Y + EH++R +I++ + R+I S
Sbjct: 306 YDRELARLYHEYKAKHGKHYRTHAEHDQRKHIYKHNFRFISS 347
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRGRRYSGPS-PHGLPFPYSKSRVEELSVKLPPEHD 432
NR N + + NHLAD T+ E+ G H + ++ K+P + D
Sbjct: 349 NRQNLSYKLKTNHLADLTEKEVQRTNGLLDDATKCTHAQSLHFDLAKALH---KIPVKLD 405
Query: 433 WR 438
WR
Sbjct: 406 WR 407
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 286 VNHLADRTDDELAALRGR-RYSGPSPH-GLPFPYSKSRVEELSVKLPPEHDWRLFGAVTP 459
+N AD ++E + R R++ SP G F + +++LP + DWR G VTP
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQRGATF------MAPNNLELPTKVDWRQQGYVTP 54
Query: 460 VKDQ 471
VK+Q
Sbjct: 55 VKNQ 58
>SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = -1
Query: 342 PPPSEGSELVVSAIGKMVHGHGETAVRSIMECMYLSDCLKMFSLFSCSRSLAYCFWSLTL 163
PPP G VV K VH S E YL DC M + + + FWS +
Sbjct: 250 PPPVTGHYAVVCRSNKQVHEVNREEEGSYQEDYYLDDCYFMGEVITTNDE----FWSAEV 305
Query: 162 KRSNSSWTWASCTGRTNSFIGLK 94
+++ T +G + +G K
Sbjct: 306 LINHNPCTLKLDSGSKVTVVGDK 328
>SB_33598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 521 RPPPPHVPNDQHEPNTN*SLTGVTAPN-NLQSCSGGSFTLNSSTRD 387
+PPP +P +++P + L VTA + + QS S TL+++ +D
Sbjct: 44 KPPPKKMPGKENKPRSKPKLNKVTASSKSSQSTQPVSSTLSTTAKD 89
>SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32)
Length = 773
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 521 RPPPPHVPNDQHE-PNTN 471
RPP PH+PN+ H P TN
Sbjct: 739 RPPQPHIPNNGHRYPETN 756
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 152 FERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERTAVSPCP*TILPIALTTSSLPS 331
F+ K KLQ++ AS + +N R + ++ I+ R + +P P I+ LP+
Sbjct: 545 FKNVKTKLQQKDASSGNDNESVNSIRDIIGHMLKIVSRPSSAPIPRRFTSISDLARDLPT 604
>SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1026
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 152 FERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHSIIERTAVSPCP*TILPIALTTSSLPS 331
F+ K KLQ++ AS + +N R + ++ I+ R + +P P I+ LP+
Sbjct: 542 FKNVKTKLQQKDASSGNDNESVNSIRDIIGHMLKIVSRPSSAPIPRRFTSISDLARDLPT 601
>SB_53670| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 428
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 205 REEAEHLQAVAQIHTFHNRANRGFTMSVNHLADR 306
R+ H Q ++ NRANR +T NHL DR
Sbjct: 393 RDPDFHFQKGRSPNSLLNRANRKYTTMDNHLVDR 426
>SB_51909| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 575
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 205 REEAEHLQAVAQIHTFHNRANRGFTMSVNHLADR 306
R+ H Q ++ NRANR +T NHL DR
Sbjct: 540 RDPDFHFQKGRSPNSLLNRANRKYTTMDNHLVDR 573
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 GLPFPYSKSRVEELSVKLPPEH-----DWRLFGAVTPVKDQLVFGSCWSFG 501
G P P K + +S+ P+H W + V+DQ GSCW+FG
Sbjct: 69 GPPLPLRKKLL--ISMDDVPDHFDSREQWPHCPTIKEVRDQGACGSCWAFG 117
>SB_46267| Best HMM Match : zf-GRF (HMM E-Value=0.0093)
Length = 342
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 330 EGSELVVSAIGKMVHGHGETAVRSIMECMYLSDCLKM 220
EG + + +G V GH ++ ++ +++C+ D LKM
Sbjct: 266 EGLQKLSDRLGLAVQGHWKSYIQDLLDCLSPVDILKM 302
>SB_21664| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.38)
Length = 93
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 205 REEAEHLQAVAQIHTFHNRANRGFTMSVNHLADR 306
R+ H Q ++ NRANR +T NHL DR
Sbjct: 58 RDPDFHFQKGRSPNSLLNRANRKYTTMDNHLVDR 91
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 416 CLRNTTGDCSERSLPL 463
CL NTTGD ER LPL
Sbjct: 285 CLHNTTGDDCERCLPL 300
>SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 77 SRHFATFNPMKEFVRPVHDAHVHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHS 253
+RH T+N + +R VH + + R+ V + + N Q++RY+H+
Sbjct: 68 TRHVHTYNTTSQAIRHVHTYNTTSQATRY-VHTYNTTSQATRYVHTYNTTSQAIRYVHT 125
>SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 256 NRANRGFTMSVNHLADRTDDELAALRG 336
NR + + + NH AD TDDE + +G
Sbjct: 2 NRRSLPYKLEPNHFADLTDDEFKSYKG 28
>SB_6680| Best HMM Match : Astacin (HMM E-Value=0)
Length = 637
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 150 SSWT-WASCTGRTNSFIGLKVAKCREPGPGN 61
S WT W+ C+ + + ++ KC P P N
Sbjct: 452 SQWTTWSDCSRQCGGGLQVRERKCNNPAPAN 482
>SB_59160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 77 SRHFATFNPMKEFVRPVHDAHVHDEFERFKVKLQKQYASDLEHEKRLNIFRQSLRYIHS 253
+RH T+N + R VH + + R+ V + + N Q++RY+H+
Sbjct: 16 TRHVHTYNTTSQATRHVHTCNTTSQATRY-VHTYNTTSQATRYVHTYNTTSQAIRYVHT 73
>SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 282 VREPSCRSH*RRARCPQREEVLGAQPSRSPVPVQ-QISSGGVERKAASG 425
+ PS R+ R+ PQ+E GAQ +R+P P Q + + GVE K + G
Sbjct: 323 ISHPSSRNGGRKFE-PQQESRQGAQ-NRNPPPRQIGVRATGVEEKESGG 369
>SB_12085| Best HMM Match : TBP (HMM E-Value=3.5e-35)
Length = 440
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 150 SSWT-WASCTGRTNSFIGLKVAKCREPGPG 64
S+W+ W+ CT + K+ KC P PG
Sbjct: 35 SAWSEWSVCTRTCGEGLQGKIRKCNSPTPG 64
>SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 602 CSRNPRSSR*APAG*AXTGARLCAGTARPPPPHVPN-DQHEPNTN*SLTGV 453
C P + + P G + G + GT PPP HVP D +P T T V
Sbjct: 399 CVHEPHNKK-GP-GNSNIGLVVSLGTGVPPPEHVPTFDVFKPETMWDATNV 447
>SB_14739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 301 DRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRL 441
D+TDD L Y+G SP L +++ V + PE D +L
Sbjct: 4 DQTDDHLKYTFHEVYNGNSPRCLLAKVESLTIDDQIVTITPEEDIKL 50
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 527 TARPPPPHVPNDQHEPNTN*SLTGVTAP 444
T RP PPHVP H P + + G TAP
Sbjct: 612 TFRPTPPHVPVCGHRPLSR-IVGGSTAP 638
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,502,902
Number of Sequences: 59808
Number of extensions: 373003
Number of successful extensions: 1600
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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