Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0742.Seq
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 50 2e-06
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 41 8e-04
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 37 0.013
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 33 0.21
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 32 0.27
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 31 0.63
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 31 0.63
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 31 0.63
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 31 0.63
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 31 0.63
AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical ... 30 1.5
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 29 1.9
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical pr... 28 5.9
M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific cy... 28 5.9
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 28 5.9
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.8
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 27 7.8
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 27 7.8
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 50.8 bits (116), Expect = 7e-07
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 HNRANRGFTMSVNHLADRTDDELAALRG-RRYSGPSPHGLPFPYSKSRVEELSVKLPPEH 429
H + F M +NH+AD + L G RR G S S S + +V++P E
Sbjct: 69 HRLGRKTFEMGLNHIADLPFSQYRKLNGYRRLFGDSR----IKNSSSFLAPFNVQVPDEV 124
Query: 430 DWRLFGAVTPVKDQLVFGSCWSF 498
DWR VT VK+Q + GSCW+F
Sbjct: 125 DWRDTHLVTDVKNQGMCGSCWAF 147
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 NRGFTMSVNHLADRTDDELAAL-RGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRL 441
N G + VN D TD+EL + + +Y+ + P + E V P DWR
Sbjct: 120 NLGLDLDVNEFTDWTDEELQKMVQENKYT---KYDFDTPKFEGSYLETGVIRPASIDWRE 176
Query: 442 FGAVTPVKDQLVFGSCWSFGT 504
G +TP+K+Q GSCW+F T
Sbjct: 177 QGKLTPIKNQGQCGSCWAFAT 197
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 415 LPPEHDWRLFGAVTPVKDQLVFGSCWSFGT 504
LP DWR GAVT VK+Q GSCW+F T
Sbjct: 264 LPESFDWREKGAVTQVKNQGNCGSCWAFST 293
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 370 PFPYS-KSRVEELSVKLPPEHDWRLFGAVTPVKDQLVFGSCWSFGT 504
P P S ++ E S P DWR +TPVK Q GSCW+F +
Sbjct: 116 PIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFAS 161
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 370 PFPYS-KSRVEELSVKLPPEHDWRLFGAVTPVKDQLVFGSCWSFGT 504
P P S ++ E S P DWR +TPVK Q GSCW+F +
Sbjct: 170 PIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFAS 215
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.21
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Frame = +1
Query: 214 AEHLQAVAQIHTFHNRANRGFTMSVNHLADRTDDELAALRGRR----------YSGPSPH 363
A++ Q + +++ R R T N AD+ EL+A + Y P
Sbjct: 21 AKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSARNSKIHPKNHTDLPIYKPRHPR 80
Query: 364 GLPFPYSKSRVEELSVKLPPEHDWR---LFGA--VTPVKDQLVFGSCWSFGT 504
G ++K R + S +P D R + G+ V PVKDQ G CW+F T
Sbjct: 81 GSRNHHNK-RSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQEQCGCCWAFAT 131
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 274 FTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAV 453
+ MS N + D E+A L +P P + S ++ + P DWR F +
Sbjct: 179 YKMSTNQFSVALDGEVAPLT-LNLDALTPTATVIPATISSRKKRDTE--PTVDWRPF--L 233
Query: 454 TPVKDQLVFGSCWSF 498
P+ DQ G CW+F
Sbjct: 234 KPILDQSTCGGCWAF 248
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 SRVEELSVKLPPEHD----WRLFGAVTPVKDQLVFGSCWSFG 501
S+ ++L + +P D W ++ ++DQ GSCW+FG
Sbjct: 95 SKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFG 136
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 SRVEELSVKLPPEHD----WRLFGAVTPVKDQLVFGSCWSFG 501
S+ ++L + +P D W ++ ++DQ GSCW+FG
Sbjct: 86 SKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFG 127
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 SRVEELSVKLPPEHD----WRLFGAVTPVKDQLVFGSCWSFG 501
S+ ++L + +P D W ++ ++DQ GSCW+FG
Sbjct: 96 SKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFG 137
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 SRVEELSVKLPPEHD----WRLFGAVTPVKDQLVFGSCWSFG 501
S+ ++L + +P D W ++ ++DQ GSCW+FG
Sbjct: 96 SKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFG 137
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 SRVEELSVKLPPEHD----WRLFGAVTPVKDQLVFGSCWSFG 501
S+ ++L + +P D W ++ ++DQ GSCW+FG
Sbjct: 96 SKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFG 137
>AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical
protein M04G7.1 protein.
Length = 258
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -1
Query: 234 DCLKMFSLFSCSRSLAYCFWSLTLKRSNSSWTWASCTGRTNSFIGLKV-AKCREPGPGNP 58
D + M +L+ C R+ + C W+ K N T CT R N V A + G GN
Sbjct: 170 DFVDMMALY-CPRTCSLCLWAAATKIPNCGNTLPDCTTRGNYCSATSVSAYQKRVGCGN- 227
Query: 57 VHCMLLSTLKTSGSISSIL 1
C L S + ++L
Sbjct: 228 -QCGLCSPTTPQPAAPAVL 245
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +1
Query: 253 HNRANRG-FTMSVNHLADRTDDELAALRGRRYSGPSP-HGLPFPYSKSRVEELSVKLPPE 426
+N+ + G T +N +D T++E + P P H K+ +++ + LP
Sbjct: 85 YNKEDAGKVTYELNDFSDLTEEEWK----KYLMTPKPDHSEKSLKPKTLIDKKN--LPNS 138
Query: 427 HDWRLFGA---VTPVKDQLVFGSCWSFGT 504
DWR VT +K Q GSCW+F T
Sbjct: 139 VDWRNVNGTNHVTGIKYQGPCGSCWAFAT 167
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 131 DAHVHDEFERFKVKLQKQYASDLE 202
D +H++ ER++++L K+Y S+ E
Sbjct: 53 DRKLHNKLERYELRLNKEYLSEFE 76
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 SSEPRFHHVREPSCRSH*RRARCPQREEVLGAQPSRSPVP-VQQISSGGVERKAASGTR 431
S EP ++RE S + +R P R+ PSRSP P +Q SS R + S +R
Sbjct: 503 SQEPP-ENLREDS-EARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSR 559
>Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical
protein C52E4.1 protein.
Length = 329
Score = 27.9 bits (59), Expect = 5.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 433 WRLFGAVTPVKDQLVFGSCWSFG 501
W ++ ++DQ GSCW+FG
Sbjct: 95 WSECKSIKLIRDQATCGSCWAFG 117
>M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific
cysteine protease-1 protein.
Length = 329
Score = 27.9 bits (59), Expect = 5.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 433 WRLFGAVTPVKDQLVFGSCWSFG 501
W ++ ++DQ GSCW+FG
Sbjct: 95 WSECKSIKLIRDQATCGSCWAFG 117
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 SSEPRFHHVREPSCRSH*RRARCPQREEVLGAQPSRSPVP-VQQISSGGVERKAASGTR 431
S EP ++RE S + +R P R+ PSRSP P +Q SS R + S +R
Sbjct: 503 SQEPP-ENLREDS-EARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSR 559
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +1
Query: 268 RGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFG 447
R T NHL+ + + + R + PSP +P+ S +++ + + P H F
Sbjct: 158 RPLTNGNNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFP 217
Query: 448 AVTPVKDQ 471
PV Q
Sbjct: 218 PQPPVLPQ 225
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 430 RVPEAALRSTPPLEICCTGTGDREGWAP 347
R P + R PPL TG+ DR G AP
Sbjct: 294 RQPPSTFRQRPPLTAGTTGSIDRPGSAP 321
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 430 RVPEAALRSTPPLEICCTGTGDREGWAP 347
R P + R PPL TG+ DR G AP
Sbjct: 294 RQPPSTFRQRPPLTAGTTGSIDRPGSAP 321
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +1
Query: 268 RGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFG 447
R T NHL+ + + + R + PSP +P+ S +++ + + P H F
Sbjct: 158 RPLTNGNNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFP 217
Query: 448 AVTPVKDQ 471
PV Q
Sbjct: 218 PQPPVLPQ 225
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +1
Query: 268 RGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFG 447
R T NHL+ + + + R + PSP +P+ S +++ + + P H F
Sbjct: 158 RPLTNGNNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFP 217
Query: 448 AVTPVKDQ 471
PV Q
Sbjct: 218 PQPPVLPQ 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,326,063
Number of Sequences: 27780
Number of extensions: 272389
Number of successful extensions: 1144
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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