Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0741.Seq
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 142 1e-34
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 136 1e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 130 1e-30
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 128 3e-30
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 128 3e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 123 1e-28
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 123 1e-28
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 86 2e-17
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 83 2e-16
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 78 5e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 66 2e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.008
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 29 2.8
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 29 2.8
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 29 2.8
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 29 2.8
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 29 2.8
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 27 8.7
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 27 8.7
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 27 8.7
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 8.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 142 bits (345), Expect = 1e-34
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 418
P +FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 419 MVLTKMKETAEAYLGKTVQNAVITVPAYFN 508
MVL KMKETAEA+LG TV++AV+TVPAYFN
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAYFN 152
Score = 130 bits (315), Expect = 6e-31
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +3
Query: 57 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 236
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 237 MNPNNT 254
MNP+NT
Sbjct: 61 MNPHNT 66
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
SQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GER
Sbjct: 154 SQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGER 194
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 136 bits (329), Expect = 1e-32
Identities = 61/90 (67%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSS 418
P +FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 419 MVLTKMKETAEAYLGKTVQNAVITVPAYFN 508
MVL KMK+TAEA+L TV++AV+TVP YFN
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTYFN 152
Score = 130 bits (315), Expect = 6e-31
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +3
Query: 57 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 236
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 237 MNPNNT 254
MNP+NT
Sbjct: 61 MNPHNT 66
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
SQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GER
Sbjct: 154 SQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGER 194
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 130 bits (313), Expect = 1e-30
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ +FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFN 508
VL KMKETAE YLG TV++AVITVPAYFN
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFN 151
Score = 114 bits (275), Expect = 4e-26
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = +3
Query: 57 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 236
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 237 MNPNNT 254
NP NT
Sbjct: 61 RNPENT 66
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 615
SQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK
Sbjct: 153 SQRQATKDAATIAGLNAIRIINEPTAAALAYGLDK 187
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 130 bits (313), Expect = 1e-30
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ +FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFN 508
VL KMKETAE YLG TV++AVITVPAYFN
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFN 151
Score = 114 bits (275), Expect = 4e-26
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = +3
Query: 57 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 236
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 237 MNPNNT 254
NP NT
Sbjct: 61 RNPENT 66
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 615
SQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK
Sbjct: 153 SQRQATKDAATIAGLNAIRIINEPTAAALAYGLDK 187
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 128 bits (310), Expect = 3e-30
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFNTLKDKPQK 532
VL KMKE AE+YLGK V+NAV+TVPAYFN + + K
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 100 bits (240), Expect = 8e-22
Identities = 46/62 (74%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 248
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 249 NT 254
NT
Sbjct: 96 NT 97
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GER
Sbjct: 184 AQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGER 223
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 128 bits (310), Expect = 3e-30
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFNTLKDKPQK 532
VL KMKE AE+YLGK V+NAV+TVPAYFN + + K
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 100 bits (240), Expect = 8e-22
Identities = 46/62 (74%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 248
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 249 NT 254
NT
Sbjct: 96 NT 97
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GER
Sbjct: 184 AQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGER 223
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 123 bits (297), Expect = 1e-28
Identities = 56/89 (62%), Positives = 71/89 (79%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ +FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFN 508
VL KMKETAEA LG +V++AVITVPAYFN
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAYFN 151
Score = 114 bits (274), Expect = 6e-26
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = +3
Query: 57 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 236
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 237 MNPNNT 254
NP NT
Sbjct: 61 RNPENT 66
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
SQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK T E+
Sbjct: 153 SQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDEK 193
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 421
P+ IFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 422 VLTKMKETAEAYLGKTVQNAVITVPAYFNTLKDKPQK 532
VLTKMK+ AE+YLG V+NAV+TVPAYFN + + K
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATK 187
Score = 103 bits (246), Expect = 1e-22
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 248
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 249 NT 254
NT
Sbjct: 93 NT 94
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 633
+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLDKK GER
Sbjct: 181 AQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGER 220
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 430
+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + VL
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFVLM 150
Query: 431 KMKETAEAYLGKTVQNAVITVPAYFN 508
KMKETAE+YLG TV NAV+TVPAYFN
Sbjct: 151 KMKETAESYLGTTVNNAVVTVPAYFN 176
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 615
SQRQATKDAG ISGLNVLR+INEPTAAA+AYGLDK
Sbjct: 178 SQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK 212
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 239
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 240 NPNNT 254
N NT
Sbjct: 90 NSANT 94
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 83.0 bits (196), Expect = 2e-16
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 430
+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + VL
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFVLM 150
Query: 431 KMKETAEAYLGKTVQNAVITVPAYFN 508
KMKETAE+YLG TV N V+TVPAYFN
Sbjct: 151 KMKETAESYLGTTVNNPVVTVPAYFN 176
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 615
SQRQATKDAG ISGLNVLR+INEPTAAA+AYGLDK
Sbjct: 178 SQRQATKDAGQISGLNVLRVINEPTAAALAYGLDK 212
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 239
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 240 NPNNT 254
N NT
Sbjct: 90 NSANT 94
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLT 430
+FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 431 KMKETAEAYLGKTVQNAVITVPAYFN 508
+K AE LG V++AVITVPAYFN
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYFN 148
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 72 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 248
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 249 NTYSMPNV 272
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 609
+QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 150 TQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLT 430
+FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 431 KMKETAEAYLGKTVQNAVITVPAYFN 508
+K AE LG V++AVITVPAYFN
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYFN 148
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 72 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 248
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 249 NTYSMPNV 272
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 609
+QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 150 TQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +2
Query: 242 PQQHIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEV 412
P++ I+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 413 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 508
S+++ +K A +LG T+ VI+ PA FN
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPAEFN 186
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 48 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 212
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 213 DAAKNQVAMNPNNT 254
A Q NP T
Sbjct: 85 TRATEQQEHNPKRT 98
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 514 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 618
QR T A I+ + V R+I+EPTAAA+AYGL KK
Sbjct: 189 QRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKK 223
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +2
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 430
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 431 KMKETAEAYLG--KTVQNAVITVPAYFNTLK 517
K++ E+ L K V + V+ VP+YF ++
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPSYFTDVQ 154
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +3
Query: 75 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 254
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 514 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE 630
QR+A A +GLN LRI+NE TA A+AYG+ K+ E
Sbjct: 154 QRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPE 192
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 448
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 137
Query: 449 EAYLGKTVQNAVITVPAYFN 508
EAY +TV++ VITVP + N
Sbjct: 138 EAYADQTVKDVVITVPIFLN 157
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +1
Query: 502 LQYSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERKCTY 645
L ++R+A A I+GLN+L+++N+ +AAA+ YG+ ++ K T+
Sbjct: 156 LNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTH 203
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 448
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 153
Query: 449 EAYLGKTVQNAVITVPAYFN 508
EAY +TV++ VITVP + N
Sbjct: 154 EAYADQTVKDVVITVPIFLN 173
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +1
Query: 502 LQYSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERKCTY 645
L ++R+A A I+GLN+L+++N+ +AAA+ YG+ ++ K T+
Sbjct: 172 LNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTH 219
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 248
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 249 NTYSMPN 269
+ N
Sbjct: 86 LVHGQLN 92
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 451
L+G+ + + + + F V D K + +K +++ E +++M+L K+ E
Sbjct: 94 LVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMILANAKKFTE 153
Query: 452 AYL-GKTVQNAVITVPAYF 505
Y +++ VITVP YF
Sbjct: 154 EYAQAAEIKDVVITVPVYF 172
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/42 (40%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 511 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER 633
++R A + A ++GL VL++IN+ TAAA+++G+ +K GE+
Sbjct: 175 AERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEK 216
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 MEANLRSR*HIRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPLTSILSKTS 524
M+ L+ +R + S R ++PW LR K P R S FP+ + +
Sbjct: 621 MDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMRKADSDFPMPKVRGSFT 680
Query: 525 HK 530
H+
Sbjct: 681 HQ 682
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 MEANLRSR*HIRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPLTSILSKTS 524
M+ L+ +R + S R ++PW LR K P R S FP+ + +
Sbjct: 621 MDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMRKADSDFPMPKVRGSFT 680
Query: 525 HK 530
H+
Sbjct: 681 HQ 682
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 MEANLRSR*HIRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPLTSILSKTS 524
M+ L+ +R + S R ++PW LR K P R S FP+ + +
Sbjct: 679 MDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMRKADSDFPMPKVRGSFT 738
Query: 525 HK 530
H+
Sbjct: 739 HQ 740
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 MEANLRSR*HIRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPLTSILSKTS 524
M+ L+ +R + S R ++PW LR K P R S FP+ + +
Sbjct: 679 MDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMRKADSDFPMPKVRGSFT 738
Query: 525 HK 530
H+
Sbjct: 739 HQ 740
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 MEANLRSR*HIRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPLTSILSKTS 524
M+ L+ +R + S R ++PW LR K P R S FP+ + +
Sbjct: 651 MDEELKKVKQLRAREATTSMRSTLPWRLRVFEKFPTRPQMAAMRKADSDFPMPKVRGSFT 710
Query: 525 HK 530
H+
Sbjct: 711 HQ 712
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 535 HLLWLVFES--IEVSGNRDNCILHSFAEISFGSFLH 434
H L L F+S ++ GN+ NC L + EI G +H
Sbjct: 2376 HRLMLTFDSENFDIDGNQKNCDLLDYIEIRDGPTVH 2411
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 535 HLLWLVFES--IEVSGNRDNCILHSFAEISFGSFLH 434
H L L F+S ++ GN+ NC L + EI G +H
Sbjct: 2376 HRLMLTFDSENFDIDGNQKNCDLLDYIEIRDGPTVH 2411
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 218 RQEPGGDEPQQHIFDAKRLIGRKFEDATVQAD 313
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/54 (20%), Positives = 26/54 (48%)
Frame = +3
Query: 150 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTYSMPNVSSDVSSKMLLCKP 311
D G+ ++V D + +IG+ + + N Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 213 DAAKNQVAMNPNNTYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 365
D ++NQ+ P N MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 213 DAAKNQVAMNPNNTYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 365
D ++NQ+ P N MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 213 DAAKNQVAMNPNNTYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 365
D ++NQ+ P N MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,091,586
Number of Sequences: 27780
Number of extensions: 364333
Number of successful extensions: 1138
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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