Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0740.Seq
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    27   0.61 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.5  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   3.3  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   5.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.5  

>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 499 SNLQRSKSWNSKWFLGHQIFIGYWWHYRSILHP 597
           ++L+R KS   KWF+ H+I +  W      L+P
Sbjct: 55  NDLKRVKSGVKKWFVDHKIDVMNWTAQSPDLNP 87


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 450 FATCLFFLLMALIMIGVKSSKIQELEFKMVFGPSNIYWLLVAL 578
           F + ++ L+M  +++G+    +Q +E   +  PS++++L VAL
Sbjct: 634 FISAIYSLVMMAVLVGIV---VQVME-DGILAPSSVFFLAVAL 672


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 664 DNNVAEASNHSKHHPCRSKLTS 599
           D N  EAS+   H+  R+K+TS
Sbjct: 201 DTNTVEASDSCNHYTHRTKVTS 222


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 239 LVQDGHAEQHS--EQAVLPQQHASCAAEQRPNTAPIFSFY 126
           LVQ G   Q++  +QA+      S    +RP+T  ++ FY
Sbjct: 62  LVQQGFFFQNAFAQQALCAPSRNSMLTGRRPDTVRLYDFY 101


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 215 QHSEQAVLPQQHASCAAEQRPNT 147
           QHS+Q   PQQ  S    Q+P T
Sbjct: 135 QHSQQQQSPQQQQSSQQLQQPLT 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,768
Number of Sequences: 2352
Number of extensions: 16418
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)