Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0739.Seq
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   6.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 494 FFATFPCNICPVVCS 538
           F   F CN+C V CS
Sbjct: 495 FHNPFTCNMCGVECS 509


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 441 LINTLTFFTSRN 406
           L+NTLTF TS N
Sbjct: 120 LLNTLTFHTSSN 131


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 441 LINTLTFFTSRN 406
           L+NTLTF TS N
Sbjct: 120 LLNTLTFHTSSN 131


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 527 PGRYYKEMSRKKSNYIY 477
           P RY  E   K+ NY Y
Sbjct: 107 PNRYLPENQAKRHNYAY 123


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 260 SQFPQKERKKYTFFILSKY 204
           SQ P +   KYT + L+ Y
Sbjct: 336 SQIPSEVEDKYTTYFLNTY 354


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 494 KSNYIYTFLLPIILT 450
           KSN IY+FLL   LT
Sbjct: 21  KSNKIYSFLLLTTLT 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,286
Number of Sequences: 336
Number of extensions: 3696
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)