Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0739.Seq
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         24   4.3  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         24   4.3  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         24   4.3  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         24   4.3  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   4.3  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   4.3  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    23   10.0 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   10.0 

>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 68  GNWEFQWYTNNRSNSFVE 85


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 68  GNWEFQWYTNNRSNSFVE 85


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 68  GNWEFQWYTNNRSNSFVE 85


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 68  GNWEFQWYTNNRSNSFVE 85


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 86  GNWEFQWYTNNRSNSFVE 103


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 GNWERDWKT*GRENTKLE 323
           GNWE  W T  R N+ +E
Sbjct: 86  GNWEFQWYTNNRSNSFVE 103


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 327 GVPILCFLVPKFSSLVPNYPTYVPISPKRKE-KIYIFYFVEI 205
           G+  +C   PK S  + NYP+   I P  KE K Y+   +++
Sbjct: 48  GMRKVCMSRPKISEEMANYPSQ-GIFPDDKEFKCYVACLMDL 88


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +1

Query: 307  KTQNWNAKRQNRDGLLGLSLISNNRFFSLYYHL 405
            +  +W A+++     L   ++S +RFF  + H+
Sbjct: 906  EVHSWMAQKRGEVDFLLAQILSGHRFFREFLHV 938


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,323
Number of Sequences: 2352
Number of extensions: 11901
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)