Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0736.Seq
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...   105   1e-21
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    66   7e-10
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    34   2.7  
UniRef50_Q5ZA05 Cluster: Putative uncharacterized protein P0592B...    33   8.4  

>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score =  105 bits (251), Expect = 1e-21
 Identities = 48/52 (92%), Positives = 48/52 (92%)
 Frame = +3

Query: 510 GKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRLIPFF 665
           GKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCR    F
Sbjct: 28  GKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLF 79


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 367 GFPRQALNRGLPLGFRFSALRHLDPKKLD 281
           GFPRQALNRGLPLGFRFSALRHLDPKKLD
Sbjct: 45  GFPRQALNRGLPLGFRFSALRHLDPKKLD 73



 Score = 38.3 bits (85), Expect = 0.17
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 495 DAPCSGALSAAGVVVTRT 442
           DAPCSGALSAAGVVVTR+
Sbjct: 2   DAPCSGALSAAGVVVTRS 19


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -2

Query: 155 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFR 24
           +++F L G L    +WLKN+    KF++ F ++L L +  + FR
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLALGVTVFR 708


>UniRef50_Q5ZA05 Cluster: Putative uncharacterized protein
           P0592B08.11; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0592B08.11 - Oryza sativa subsp. japonica (Rice)
          Length = 235

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -2

Query: 530 GVPRTFPQKCHLTRPVAAH*ARRVWWLRARDRYTCQRPSA 411
           G  R  P  C  TR    H  RR WW R RD+Y  + P+A
Sbjct: 142 GCSRRTPHCC--TREHREH-GRRSWWARTRDKYNEEEPNA 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,526,473
Number of Sequences: 1657284
Number of extensions: 13490990
Number of successful extensions: 29354
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29347
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)