Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0735X.Seq
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.31 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.31 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.31 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.31 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   1.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   5.1  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    21   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   6.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   6.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   6.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 313 VPGFLHVIPVGDDTVLDGVLRVRMPVLL 230
           +P    +IP GDDT +D      + VLL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 313 VPGFLHVIPVGDDTVLDGVLRVRMPVLL 230
           +P    +IP GDDT +D      + VLL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 313 VPGFLHVIPVGDDTVLDGVLRVRMPVLL 230
           +P    +IP GDDT +D      + VLL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 313 VPGFLHVIPVGDDTVLDGVLRVRMPVLL 230
           +P    +IP GDDT +D      + VLL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 9   SIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 116
           S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 53  SVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 87


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 9   SIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 116
           S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 286 SVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 320


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 9   SIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGF 116
           S+   P    +KF +  D   A+V   G GM  AGF
Sbjct: 286 SVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM-NAGF 320


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 124  TTRPAPSSRPSWVALATRA*WSVWARQTPT 213
            TTR   ++RP+  +  TR   + W  Q  T
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTT 1085


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 73  RL*STMAPACARPVSPATTRPAPSSRPSW 159
           R+  T+ P   RP+ PAT   AP     W
Sbjct: 28  RVLPTVEPGYLRPLIPAT---APQKPDKW 53


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 64  MLLRL*STMAPACARPVSPATTRPAPSSR 150
           +L  L S+ +    +P + +  RPAP+SR
Sbjct: 237 LLAGLQSSGSSRSHQPATKSKPRPAPASR 265


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 9   SIPASPTQTHTKFKMCDDDVAALVVDNGSGM 101
           S+   P    +KF +  D   A+V   G GM
Sbjct: 68  SVKCKPYHVGSKFLLIGDAAHAMVPFYGQGM 98


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +1

Query: 166 LATRA*WSVWARQTP 210
           L   A W VW  Q P
Sbjct: 612 LGAEAMWPVWCAQNP 626


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -2

Query: 196 PIPTITPWWRGXPTM 152
           P P    WW G  +M
Sbjct: 262 PYPVYNQWWSGPLSM 276


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +3

Query: 27  TQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 155
           T  +  F   +DD + L++DN + +   G     A +   P++
Sbjct: 51  THVNYAFLGLNDDGSLLILDNATDITNGGLQKVAALKKTNPAL 93


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 96  RSHCRLQAQQHRRRTS 49
           R+ CR Q +QH ++ S
Sbjct: 121 RAKCRQQQKQHNQQQS 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,156
Number of Sequences: 336
Number of extensions: 1868
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)