Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0735X.Seq
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 132 9e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 9e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 9e-32
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 130 3e-31
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 130 3e-31
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 130 3e-31
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 130 3e-31
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 130 3e-31
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 130 3e-31
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 130 3e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 130 3e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 130 3e-31
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 121 2e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 91 2e-19
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 82 1e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 59 8e-10
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 45 1e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 43 6e-05
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 34 0.034
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.18
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.42
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 30 0.56
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 30 0.56
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 2.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 3.0
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 27 3.9
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 27 5.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 26 6.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 26 6.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 132 bits (318), Expect = 9e-32
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (318), Expect = 9e-32
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 41.9 bits (94), Expect = 1e-04
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEK 304
+YPIEHGI+TNWDDMEK
Sbjct: 69 KYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (318), Expect = 9e-32
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 37.9 bits (84), Expect = 0.002
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 254 EYPIEHGIITNWDDM 298
+YPIEHGI+TNWDDM
Sbjct: 69 KYPIEHGIVTNWDDM 83
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 41.9 bits (94), Expect = 1e-04
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEK 304
+YPIEHGI+TNWDDMEK
Sbjct: 69 KYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 130 bits (314), Expect = 3e-31
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKTGI 245
SK GI
Sbjct: 61 SKRGI 65
Score = 41.9 bits (94), Expect = 1e-04
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEK 304
+YPIEHGI+TNWDDMEK
Sbjct: 69 KYPIEHGIVTNWDDMEK 85
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 121 bits (291), Expect = 2e-28
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +3
Query: 57 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSK 236
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 TGI 245
GI
Sbjct: 62 RGI 64
Score = 81.4 bits (192), Expect = 2e-16
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELR+APEEHP
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 91.5 bits (217), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +3
Query: 105 KAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKTGI 245
+AGFAGDDAPRAVFPSIVG PRHQGVMVGMGQ DSYVG EAQSK GI
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 51
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 55 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 81.8 bits (193), Expect = 1e-16
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+TNWDDMEK WHH FYNELRVAPEEHP
Sbjct: 25 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Score = 39.5 bits (88), Expect = 7e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3
Query: 183 MVGMGQTDSYVGHEAQSKTGI 245
MVGMGQ DSYVG EAQSK GI
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGI 21
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 59.3 bits (137), Expect = 8e-10
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +3
Query: 57 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEA 227
D DV A +V+DNGSG+ KAGFAG+ P+ F + VG P++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 228 QSKTGI 245
+S G+
Sbjct: 62 ESNRGL 67
Score = 56.0 bits (129), Expect = 7e-09
Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNF-YNELRVAPEEHP 358
EYP+EHGI+ NW DMEK W + F ++L++ PEEHP
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHP 106
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 45.2 bits (102), Expect = 1e-05
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEH 355
+YPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 82 KYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 43.2 bits (97), Expect = 6e-05
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGXP 167
+VVDNG+G K G+AG + P +FPS+VG P
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 40.7 bits (91), Expect = 3e-04
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 257 YPIEHGIITNWDDMEKTWHHNFYNE-LRVAPEE 352
YP+++GI+ NWDDM W H F E L + P+E
Sbjct: 72 YPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 263 IEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
++ G+I +W+ EK H++ N L P EHP
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHP 125
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 82 STMAPACARPVSPATTRPAPSSRP 153
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 30.3 bits (65), Expect = 0.42
Identities = 28/69 (40%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 73 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARQTPTWVTKPR---ARQA 243
RL S +AP A P S A TR APS + VA RA S A P KP+ AR A
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA-PSPKAPVAPVAPVKPKPFVARPA 289
Query: 244 SSL*VPHRA 270
+ P A
Sbjct: 290 PNFGKPRAA 298
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.56
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNF 322
PIE G + NWD ++ W F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.56
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNF 322
PIE G + NWD ++ W F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 82 STMAPACARPVSPATTRPAPSSRPSWVALATRA 180
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 105 KAGFAGDDAPRAVFPSIVGXPRHQG 179
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 196 PIPTITPWWRGXPTMDGKTARGASSPAKPALHMPEPL 86
P T TP RG P + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 109 PVSPATTRPAPSSRPSWVALATRA*WSVWARQTPTWVTKPRARQASSL*VPHRARYHHQL 288
P++ A+ P+SR S + R+ ++ R +T+P AR ++S + H L
Sbjct: 429 PITVASEYGVPASRNSDASSEGRSSNEIYRRPNQIALTRPEARHSNSTFMTHSTTMETDL 488
Query: 289 G*HGENLA 312
N A
Sbjct: 489 DSQASNQA 496
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 YPIEHGIITN-WDDMEKTWHHNFYNELRVAPEEHP 358
+P E+ I+++ WD + W + E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 YPIEHGIITN-WDDMEKTWHHNFYNELRVAPEEHP 358
+P E+ I+++ WD + W + E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,657,522
Number of Sequences: 27780
Number of extensions: 174207
Number of successful extensions: 672
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -