Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0735X.Seq
(359 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 107 3e-24
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 107 3e-24
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 107 3e-24
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 107 3e-24
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 107 3e-24
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 107 3e-24
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 105 9e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 105 9e-24
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 105 9e-24
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 99 8e-22
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 75 2e-14
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 71 3e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 2e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 3e-09
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 54 3e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 46 6e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 2e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 31 0.17
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 0.40
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 2.8
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 2.8
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 2.8
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 3.8
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 27 3.8
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 27 5.0
At1g18690.1 68414.m02332 galactosyl transferase GMA12/MNN10 fami... 27 5.0
At3g15250.1 68416.m01926 expressed protein ; expression supporte... 26 6.6
At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein sim... 26 6.6
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 26 6.6
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 26 8.7
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 26 8.7
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.8 bits (188), Expect = 5e-16
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+ NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 80.2 bits (189), Expect = 4e-16
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI++NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.8 bits (188), Expect = 5e-16
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+ NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.8 bits (188), Expect = 5e-16
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+ NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 80.2 bits (189), Expect = 4e-16
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI++NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (256), Expect = 3e-24
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVG PRH GVMVGMGQ D+YVG EAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.8 bits (188), Expect = 5e-16
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHGI+ NWDDMEK WHH FYNELRVAPEEHP
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 105 bits (252), Expect = 9e-24
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VG PRH GVMVGM Q D+YVG EAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.4 bits (187), Expect = 7e-16
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHG+++NWDDMEK WHH FYNELR+APEEHP
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 105 bits (252), Expect = 9e-24
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VG PRH GVMVGM Q D+YVG EAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.4 bits (187), Expect = 7e-16
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHG+++NWDDMEK WHH FYNELR+APEEHP
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 105 bits (252), Expect = 9e-24
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VG PRH GVMVGM Q D+YVG EAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GI 245
GI
Sbjct: 65 GI 66
Score = 79.4 bits (187), Expect = 7e-16
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHG+++NWDDMEK WHH FYNELR+APEEHP
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 99.1 bits (236), Expect = 8e-22
Identities = 43/62 (69%), Positives = 53/62 (85%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKT 239
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VG PRH+GVMVGM + D++VG EAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 240 GI 245
GI
Sbjct: 66 GI 67
Score = 76.6 bits (180), Expect = 5e-15
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YPIEHG+++NWDDMEK WHH FYNELR+ PEEHP
Sbjct: 71 KYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHP 105
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 74.5 bits (175), Expect = 2e-14
Identities = 26/35 (74%), Positives = 33/35 (94%)
Frame = +2
Query: 254 EYPIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
+YP+EHG+++NWDDMEK W+H FY+ELRVAPEEHP
Sbjct: 25 DYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 183 MVGMGQTDSYVGHEAQSKTGI 245
MVGM + D +VG +A++++GI
Sbjct: 1 MVGMNENDLFVGDDAEARSGI 21
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 70.5 bits (165), Expect = 3e-13
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
P+EHGI+ NWDDMEK WH+ FYNELRV PEEHP
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 57.2 bits (132), Expect = 3e-09
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVGHEAQSKTGI 245
+V D G GM +AGFAGD+AP+ VFP +VG PR G+ +SYVG E + I
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDI 55
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.6 bits (133), Expect = 2e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 161
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 41.9 bits (94), Expect = 1e-04
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
P + GI+T+WD ++ W H F N L + P EHP
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 161
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 40.7 bits (91), Expect = 3e-04
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 239 RHPHSEY--PIEHGIITNWDDMEKTWHHNFYNELRVAPEEHP 358
R H E PI+ GI+++WD ++ W H F + L + P EHP
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 54.0 bits (124), Expect = 3e-08
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 257 YPIEHGIITNWDDMEKTWHHNFYNELRVAPEE 352
YP+ +GI+ NWDDME W H FYNEL++ P +
Sbjct: 70 YPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGXP--RHQGVMVGMGQTDSYVG 218
D+ +V DNG+G K GFAG++ P +VFP +VG P R++ ++ D VG
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 46.4 bits (105), Expect = 6e-06
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 257 YPIEHGIITNWDDMEKTWHHNFYNELRVAPEEH 355
YPIEHG + +WD ME+ W +N LR PE+H
Sbjct: 88 YPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 72 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGXPRHQGVMVGMGQTDSYVG 218
+V+DNG+ + G+AG+ PR VF +IV PRH+ G+T + VG
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVG 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGXP 167
+V+DNG G+ KAG G+ P V P+ + P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNFYNELRVAP 346
PI+ G + N D + W H F + L +AP
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAP 92
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 22 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 165
P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 8 VNTSVPNTNTHKVQDVRRRCCCA 76
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 8 VNTSVPNTNTHKVQDVRRRCCCA 76
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 82 STMAPACARPVSPATTRPAPSSRP 153
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 72 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 152
ALVVD GS KAG A D +P + PS
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPS 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 260 PIEHGIITNWDDMEKTWHHNFYNEL 334
PIE G+I +WD ME + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 172 WRGXPTMDGKTARGASSPAKPA--LHMPEPL 86
WR T G+ + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 134 GRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 42
G +AGET A A A + ++RSN V + L L
Sbjct: 169 GSDLAGETAAAMAAASIVFRRSNPVYSRLLL 199
>At1g18690.1 68414.m02332 galactosyl transferase GMA12/MNN10 family
protein very low similarity to
alpha-1,2-galactosyltransferase, Schizosaccharomyces
pombe [SP|Q09174]
Length = 632
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 227 PEQDRHPHSEYPIEHGIITNWDDMEKTW 310
P+ D P++ Y + I TNWD K W
Sbjct: 286 PKADISPNATYTLGPKI-TNWDSQRKVW 312
>At3g15250.1 68416.m01926 expressed protein ; expression supported
by MPSS
Length = 217
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 7 SQYQRPQHKHTQSSRCATTMLLR 75
S Y PQHK ++ ATT L R
Sbjct: 135 SSYSSPQHKRRKAMEMATTSLYR 157
>At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GI:4972236 from
[Fragaria x ananassa]
Length = 525
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 146 EDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 42
E+ G +AGET A A A + ++ +N +HL L
Sbjct: 179 ENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLL 213
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 275 IITNWDDMEKTWHHNFYNELRVAPE 349
+ NW+D+ +TWH + Y+ V E
Sbjct: 423 VFENWEDIVQTWHLDGYSFFVVGME 447
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 25.8 bits (54), Expect = 8.7
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 109 PVSPATTRPAPSSRPSWVALATRA*WSVWARQTPTWVTKPRARQASSL*VPHRARYHHQL 288
P +PA+ PAP+S P A A S Q P+ ++ P A + H+ ++ H+
Sbjct: 126 PPTPASPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAP--TKHKRKHKHKR 183
Query: 289 G*HGENLAP 315
H AP
Sbjct: 184 HHHAPAPAP 192
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 16 QRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWV 162
Q KH SS+CA L++ + + A + + +S+P W+
Sbjct: 241 QNKDLKHRSSSQCANAQLVKTHGSPSAAPKHQSAQMVAKHHRASKPKWL 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,273,464
Number of Sequences: 28952
Number of extensions: 163696
Number of successful extensions: 586
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 469342752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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