Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0732.Seq
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.70 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.9  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   8.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.6  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 8   PTAVRFASVRQTVSHNRTCVV 70
           P A+R AS  QTVS++  CVV
Sbjct: 810 PGALRVASAFQTVSYDAACVV 830


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 133 PCCQTWTSPTCRSMTAALSSP 195
           P C T TS T  S  +A SSP
Sbjct: 40  PACTTTTSTTSTSGASAASSP 60


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 133 PCCQTWTSPTCRSMTAALSSP 195
           P C T TS T  S  +A SSP
Sbjct: 40  PACTTTTSTTSTSGASAASSP 60


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 468 LSRLRPDGPREGQRVVLDSCTKCAVVFDNLVS 563
           +S   PDG  + Q  V DSC     V +++ S
Sbjct: 408 ISSTAPDGKAKYQEWVQDSCRNIVHVLEDIPS 439


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 162 SWRSPRLAARAAEGEVLPGEAVGVYQHCPCQTTQVLLCET 43
           S RS   A RAA+ ++   E   + ++C   +T    C T
Sbjct: 743 SLRSVESAERAAKYDIFSNECSDLLENCEAGSTASAECVT 782


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,415
Number of Sequences: 2352
Number of extensions: 14272
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)